BAC Information

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BAC

Clone NameB6Ng01-105G15
Chromosome13 (Build37)
Map Location 37,013,463 - 37,141,986
singlet/doubletdoublet
Overlap geneF13a1
Upstream geneLOC100041568, Ppp1r3g, Lyrm4, LOC100042773, Fars2, LOC100041590, LOC666758, Nrn1
Downstream geneLy86, LOC100042794, LOC100042800, LOC100042802, LOC100041624, Rreb1, Ssr1, Cage1, Riok1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105G15.bB6Ng01-105G15.g
ACCDH913444DH913445
length683859
definitionDH913444|Mus musculus domesticus DNA, BAC clone: B6Ng01-105G15, 5' end.DH913445|Mus musculus domesticus DNA, BAC clone: B6Ng01-105G15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,141,304 - 37,141,986)(37,013,463 - 37,014,316)
sequence
gaattcctaaccaatagcatctctttgaaatgtgaagattgcgtgtcaga
atcagacatctggagactatgagagcatttagatggatctgtggttaaaa
tcaatggttaaacatgtggccatatcaaaataaagataggcaaattctgg
ggtggataactttctttcctttctctgtaagtcttggagatacaccagaa
tgctccaaggcaaaacaaagcatttccagcttgggtgacactcttgaggg
tatctgtccatcagttctgacgctggacttcaatgtggctgtactacagg
aagttctgtggtttggctggggctggggctggggctggggctggggctgg
ggctggggctggggctggggctggggctggggctggatctgtgggggaat
tcaggacgcaattttctttgcacaagatggactcattgctctttctttat
gcatggtcaccactgtctgtgtgacctgtctgtgaaaaggcagatcctcc
cttctgccagctcaccaccctggcaaggcatttccacaggataaaaaaat
gtccctttagcccttctgacccagcaagagggcagaagagaggctggctc
acactccagtgccatttgccagttgctagtagtagccagaggaggggaaa
ggctgactgggggtctgggggtggggggagtga
gaattccattggtgaagaaggttacaaagtgcagtagagtattctagaag
agggatatgagttgtgaaggggagaggaaaataatgagtcaggggctact
gcttaacacaatacaaggaagatggctttgaatagttaagtttaggcatg
actgacatatgcctacttcctacccattggctcttttagtatggaaaggg
ccagtgggaaggaagtgggaataagggttcaatttaagggtcaagtggca
gaggccagggacagtcagtgggacaggtgtagaaagttattccaggtctc
cagggaagtaaggatatggtaaggatcacgatatatggtctctgagcagg
atcgagagttgaggttctactagagagcaacctctgtctcaggatggtca
ctttgtgtagcaccttgcctatctacatccagaagagaggcagaggcacc
agggaagacagcaaaaagacatttccagggcagagtgggcctgttttctc
catggttctccctgttccacgtccccctcccaagatgaatagggtccaga
ttatccttattaaatgcagatctccttgacaaggttagcctgggacaaga
caaatactccgtatttcagatctcaggcaaagacatttctctaaagataa
tatttcttttcatatggccaggaggtgggggaatgttacctctcagtgta
tcaccctaattgctttacccacgaggtccagctttccagttttacttact
gctaggatgctctctgtgttaaaaagggttcctcatagggcgaggagctc
gcatgcagtagggagactgattgatagctgcactctctttggcagtgggt
ggcaagggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_37141304_37141986
seq2: B6Ng01-105G15.b_43_725 (reverse)

seq1  TCACTCCCCCCACCCCCAGACCCCCAGTCAGCCTTTCCCCTCCTCTGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCCCCCCACCCCCAGACCCCCAGTCAGCCTTTCCCCTCCTCTGGCT  50

seq1  ACTACTAGCAACTGGCAAATGGCACTGGAGTGTGAGCCAGCCTCTCTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTAGCAACTGGCAAATGGCACTGGAGTGTGAGCCAGCCTCTCTTCT  100

seq1  GCCCTCTTGCTGGGTCAGAAGGGCTAAAGGGACATTTTTTTATCCTGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTTGCTGGGTCAGAAGGGCTAAAGGGACATTTTTTTATCCTGTGG  150

seq1  AAATGCCTTGCCAGGGTGGTGAGCTGGCAGAAGGGAGGATCTGCCTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCTTGCCAGGGTGGTGAGCTGGCAGAAGGGAGGATCTGCCTTTTC  200

seq1  ACAGACAGGTCACACAGACAGTGGTGACCATGCATAAAGAAAGAGCAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAGGTCACACAGACAGTGGTGACCATGCATAAAGAAAGAGCAATG  250

seq1  AGTCCATCTTGTGCAAAGAAAATTGCGTCCTGAATTCCCCCACAGATCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCATCTTGTGCAAAGAAAATTGCGTCCTGAATTCCCCCACAGATCCA  300

seq1  GCCCCAGCCCCAGCCCCAGCCCCAGCCCCAGCCCCAGCCCCAGCCCCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAGCCCCAGCCCCAGCCCCAGCCCCAGCCCCAGCCCCAGCCCCAGC  350

seq1  CCCAGCCCCAGCCCCAGCCAAACCACAGAACTTCCTGTAGTACAGCCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCCCCAGCCCCAGCCAAACCACAGAACTTCCTGTAGTACAGCCACA  400

seq1  TTGAAGTCCAGCGTCAGAACTGATGGACAGATACCCTCAAGAGTGTCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTCCAGCGTCAGAACTGATGGACAGATACCCTCAAGAGTGTCACC  450

seq1  CAAGCTGGAAATGCTTTGTTTTGCCTTGGAGCATTCTGGTGTATCTCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTGGAAATGCTTTGTTTTGCCTTGGAGCATTCTGGTGTATCTCCAA  500

seq1  GACTTACAGAGAAAGGAAAGAAAGTTATCCACCCCAGAATTTGCCTATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTACAGAGAAAGGAAAGAAAGTTATCCACCCCAGAATTTGCCTATCT  550

seq1  TTATTTTGATATGGCCACATGTTTAACCATTGATTTTAACCACAGATCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGATATGGCCACATGTTTAACCATTGATTTTAACCACAGATCCA  600

seq1  TCTAAATGCTCTCATAGTCTCCAGATGTCTGATTCTGACACGCAATCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATGCTCTCATAGTCTCCAGATGTCTGATTCTGACACGCAATCTTC  650

seq1  ACATTTCAAAGAGATGCTATTGGTTAGGAATTC  683
      |||||||||||||||||||||||||||||||||
seq2  ACATTTCAAAGAGATGCTATTGGTTAGGAATTC  683

seq1: chr13_37013463_37014316
seq2: B6Ng01-105G15.g_70_927

seq1  GAATTCCATTGGTGAAGAAGGTTACAAAGTGCAGTAGAGTATTCTAGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTGGTGAAGAAGGTTACAAAGTGCAGTAGAGTATTCTAGAAG  50

seq1  AGGGATATGAGTTGTGAAGGGGAGAGGAAAATAATGAGTCAGGGGCTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATATGAGTTGTGAAGGGGAGAGGAAAATAATGAGTCAGGGGCTACT  100

seq1  GCTTAACACAATACAAGGAAGATGGCTTTGAATAGTTAAGTTTAGGCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAACACAATACAAGGAAGATGGCTTTGAATAGTTAAGTTTAGGCATG  150

seq1  ACTGACATATGCCTACTTCCTACCCATTGGCTCTTTTAGTATGGAAAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACATATGCCTACTTCCTACCCATTGGCTCTTTTAGTATGGAAAGGG  200

seq1  CCAGTGGGAAGGAAGTGGGAATAAGGGTTCAATTTAAGGGTCAAGTGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGGGAAGGAAGTGGGAATAAGGGTTCAATTTAAGGGTCAAGTGGCA  250

seq1  GAGGCCAGGGACAGTCAGTGGGACAGGTGTAGAAAGTTATTCCAGGTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCAGGGACAGTCAGTGGGACAGGTGTAGAAAGTTATTCCAGGTCTC  300

seq1  CAGGGAAGTAAGGATATGGTAAGGATCACGATATATGGTCTCTGAGCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAAGTAAGGATATGGTAAGGATCACGATATATGGTCTCTGAGCAGG  350

seq1  ATCGAGAGTTGAGGTTCTACTAGAGAGCAACCTCTGTCTCAGGATGGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGAGAGTTGAGGTTCTACTAGAGAGCAACCTCTGTCTCAGGATGGTCA  400

seq1  CTTTGTGTAGCACCTTGCCTATCTACATCCAGAAGAGAGGCAGAGGCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGTAGCACCTTGCCTATCTACATCCAGAAGAGAGGCAGAGGCACC  450

seq1  AGGGAAGACAGCAAAAAGACATTTCCAGGGCAGAGTGGGCCTGTTTTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGACAGCAAAAAGACATTTCCAGGGCAGAGTGGGCCTGTTTTCTC  500

seq1  CATGGTTCTCCCTGTTCCACGTCCCCCTCCCAAGATGAATAGGGTCCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTTCTCCCTGTTCCACGTCCCCCTCCCAAGATGAATAGGGTCCAGA  550

seq1  TTATCCTTATTAAATGCAGATCTCCTTGACAAGGTTAGCCTGGGACAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCTTATTAAATGCAGATCTCCTTGACAAGGTTAGCCTGGGACAAGA  600

seq1  CAAATACTCCGTATTTCAGATCTCAGGCAAAGACATTTCTCTAAAGATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACTCCGTATTTCAGATCTCAGGCAAAGACATTTCTCTAAAGATAA  650

seq1  TATTTCTTTTCATATGGCCAGGAGGT-GGGGAATGTTACCTCTCAGTGTA  699
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TATTTCTTTTCATATGGCCAGGAGGTGGGGGAATGTTACCTCTCAGTGTA  700

seq1  TCA-CCTAATTGC-TTACCCACGAGGTCCAGC-TTCCAGTTTTACTTACT  746
      ||| ||||||||| |||||||||||||||||| |||||||||||||||||
seq2  TCACCCTAATTGCTTTACCCACGAGGTCCAGCTTTCCAGTTTTACTTACT  750

seq1  GCTAGGATGCTCTCTGTGTTTAAAAAGGTTCCTCACAGGGCGAGGAGCTC  796
      |||||||||||||||||||| |||| ||||||||| ||||||||||||||
seq2  GCTAGGATGCTCTCTGTGTTAAAAAGGGTTCCTCATAGGGCGAGGAGCTC  800

seq1  GCAGGCAGTAGGGAGACTGATTGATAGCTGCACTCTCTTTGGCAGTGGGT  846
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCAGTAGGGAGACTGATTGATAGCTGCACTCTCTTTGGCAGTGGGT  850

seq1  GGCAAGGG  854
      ||||||||
seq2  GGCAAGGG  858