BAC Information

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BAC

Clone NameB6Ng01-106I19
Chromosome13 (Build37)
Map Location 39,317,943 - 39,473,660
singlet/doubletdoublet
Overlap geneEG666867
Upstream gene6530403A03Rik, Bmp6, Txndc5, Muted, Eef1e1, LOC621102, Slc35b3
Downstream geneLOC100041779, LOC382747, A230103O09Rik, Ofcc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106I19.bB6Ng01-106I19.g
ACCDH914256DH914257
length6481,107
definitionDH914256|Mus musculus domesticus DNA, BAC clone: B6Ng01-106I19, 5' end.DH914257|Mus musculus domesticus DNA, BAC clone: B6Ng01-106I19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(39,317,943 - 39,318,590)(39,472,543 - 39,473,660)
sequence
gaattctcaagccagccaggccatcttctcagccagctttgcctcaggca
ccctggatattgctgcatgagagctatatttcacgagttctcaaatgttc
tcagctaacagcccatggttgaaggctgaaccctctgccacataaccaag
ctgaccagcttccaccacttctaagaaactatccatcagaatttgctaga
atttattgcaagaacaaccttctgtttcatgtgttgccgtgtgtgaaccc
tggctttatcagctattcaagtaatgtaataacttctaatctctatctaa
taaaacaaaaaaaaatattatcaatgggtcaatgaagggactctctaggt
ccaaaaggtgattcttgaagtctgtgtttgaaaactttcactagatattg
tgaaaattaaggtaaggcaattgatagccttggccctcctaattctttct
taacaaaagtataaaattcacaaagtaataaatttcaacaaattctgact
tcagagaacatggaaggtttggaggaaagctcatttatcttttttctttt
ctttttaaattttattttccttttaaatatagtgagcatctgctcgtgca
tgtgtgtgtgtgtgtgtgtgcatgtgtgtgtgtgtgtgtgtgtatgtg
gaattcaaagaaaacatgaagttgaatcttcttagaatgttgtaataaca
gttaagagtttggggaagcatttttatatctcagtacttatttgaccctt
agtttgtcttttaaaactctttggttgctttccttctttctaaaaagcat
cattatctctttcaaggaaattattctaacttgtattttttttaaataat
ctcataaaacaatgggaacttctgtctaaaccctcgtaggaaccagaata
tcggcttgtgggaaggcaggaggatggacagtaaggggctggtgtgatta
gtatggcatggaaagctacgttcaaagggagaggaaatcagggtcttcct
ttgggaatattagctattataaaaataagtgaatgtagggtagtgtactg
gctagttttgtgtcaacttgacacaagctggagttattacagaataaaga
gtttcagttggggaaatgtctccatgagatccagctgtggggcattttct
caattagtgatcaagtggggaggacccactgtaggtgggaccatctctgg
gctggtagtcttggggttctataagagagcaggctgagcaagccaggggg
agcaaaccagtaaagaacatccctccatggcctctgcatcagctcctgct
ttttgacttgcttgagttccagtcctgacttcctttagtgatgaactgca
atgtggaaaatgtaagctgaataaaccctttcctccccaacttccttctt
gatcatgatgtctgtgtaggaatagaaaccctgactaagacaggtagtaa
ataaaaacaaccacatttctgtttatatcccaaacatgctctagcaagga
acataaagacacaacttgcatgagaaagcatgggccattcatcaacatca
ctgtgataaattgttggaattatctgatggtgtgtaaaacagtcatcatg
taggctacgaccagtgacatttttttttccgaaacaataggaaatctcag
aaagaagcagaagttggaaacttcactgagtagaaattggtgattgggat
ggaatctttccttgtgaactgaagagcaggttggaatgacgagaagaacg
agccaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_39317943_39318590
seq2: B6Ng01-106I19.b_49_696

seq1  GAATTCTCAAGCCAGCCAGGCCATCTTCTCAGCCAGCTTTGCCTCAGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAGCCAGCCAGGCCATCTTCTCAGCCAGCTTTGCCTCAGGCA  50

seq1  CCCTGGATATTGCTGCATGAGAGCTATATTTCACGAGTTCTCAAATGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGATATTGCTGCATGAGAGCTATATTTCACGAGTTCTCAAATGTTC  100

seq1  TCAGCTAACAGCCCATGGTTGAAGGCTGAACCCTCTGCCACATAACCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTAACAGCCCATGGTTGAAGGCTGAACCCTCTGCCACATAACCAAG  150

seq1  CTGACCAGCTTCCACCACTTCTAAGAAACTATCCATCAGAATTTGCTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCAGCTTCCACCACTTCTAAGAAACTATCCATCAGAATTTGCTAGA  200

seq1  ATTTATTGCAAGAACAACCTTCTGTTTCATGTGTTGCCGTGTGTGAACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTGCAAGAACAACCTTCTGTTTCATGTGTTGCCGTGTGTGAACCC  250

seq1  TGGCTTTATCAGCTATTCAAGTAATGTAATAACTTCTAATCTCTATCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTATCAGCTATTCAAGTAATGTAATAACTTCTAATCTCTATCTAA  300

seq1  TAAAACAAAAAAAAATATTATCAATGGGTCAATGAAGGGACTCTCTAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAAAAAAAAATATTATCAATGGGTCAATGAAGGGACTCTCTAGGT  350

seq1  CCAAAAGGTGATTCTTGAAGTCTGTGTTTGAAAACTTTCACTAGATATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAGGTGATTCTTGAAGTCTGTGTTTGAAAACTTTCACTAGATATTG  400

seq1  TGAAAATTAAGGTAAGGCAATTGATAGCCTTGGCCCTCCTAATTCTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATTAAGGTAAGGCAATTGATAGCCTTGGCCCTCCTAATTCTTTCT  450

seq1  TAACAAAAGTATAAAATTCACAAAGTAATAAATTTCAACAAATTCTGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAAAGTATAAAATTCACAAAGTAATAAATTTCAACAAATTCTGACT  500

seq1  TCAGAGAACATGGAAGGTTTGGAGGAAAGCTCATTTATCTTTTTTCTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAACATGGAAGGTTTGGAGGAAAGCTCATTTATCTTTTTTCTTTT  550

seq1  CTTTTTAAATTTTATTTTCCTTTTAAATATAGTGAGCATCTGCTCGTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAAATTTTATTTTCCTTTTAAATATAGTGAGCATCTGCTCGTGCA  600

seq1  TGTGTGTGTGTGTGTGTGTGCATGTGTGTGTGTGTGTGTGTGTATGTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGCATGTGTGTGTGTGTGTGTGTGTATGTG  648

seq1: chr13_39472543_39473660
seq2: B6Ng01-106I19.g_68_1174 (reverse)

seq1  ATTGGCTCGTTCTCTTCTCCGTCATCCCCACCCTGCTCTCAGGTCCACAC  50
      ||||||||||  |||||| ||||||  ||| ||||||||   || |||| 
seq2  ATTGGCTCGT--TCTTCT-CGTCAT-TCCAACCTGCTCTTCAGTTCACAA  46

seq1  AGAAAGATTTTCATCCCAATTCCACAATTTCTACTCAGTTGAAGTTTTCC  100
       |||||| || |||||||| ||  |||||||||||||| ||||| |||||
seq2  GGAAAGA-TTCCATCCCAA-TCACCAATTTCTACTCAG-TGAAG-TTTCC  92

seq1  AACTTCTGCTTCTTTTCTGAGATTTCCTATTGTTTCGGAAAAAAAAATGT  150
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AACTTCTGCTTC-TTTCTGAGATTTCCTATTGTTTCGGAAAAAAAAATGT  141

seq1  CACTGGTCGTAGGCTTACATGATGACTGTTTTACACACCATCAGATAATT  200
      ||||||||||| || |||||||||||||||||||||||||||||||||||
seq2  CACTGGTCGTA-GCCTACATGATGACTGTTTTACACACCATCAGATAATT  190

seq1  CCAACAATTTATTCACAGTGATGTTGATGAATGGCCCATGCTTTCTCATG  250
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CCAACAATTTA-TCACAGTGATGTTGATGAATGGCCCATGCTTTCTCATG  239

seq1  CAAGTTGTGTCTTTATGTTCCTTGCTAGAGCATGTTTGGGATATAAACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTGTGTCTTTATGTTCCTTGCTAGAGCATGTTTGGGATATAAACAG  289

seq1  AAATGTGGTTGTTTTTATTTACTACCTGTCTTAGTCAGGGTTTCTATTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGGTTGTTTTTATTTACTACCTGTCTTAGTCAGGGTTTCTATTCC  339

seq1  TACACAGACATCATGATCAAGAAGGAAGTTGGGGAGGAAAGGGTTTATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGACATCATGATCAAGAAGGAAGTTGGGGAGGAAAGGGTTTATTC  389

seq1  AGCTTACATTTTCCACATTGCAGTTCATCACTAAAGGAAGTCAGGACTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTACATTTTCCACATTGCAGTTCATCACTAAAGGAAGTCAGGACTGG  439

seq1  AACTCAAGCAAGTCAAAAAGCAGGAGCTGATGCAGAGGCCATGGAGGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAAGCAAGTCAAAAAGCAGGAGCTGATGCAGAGGCCATGGAGGGAT  489

seq1  GTTCTTTACTGGTTTGCTCCCCCTGGCTTGCTCAGCCTGCTCTCTTATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTACTGGTTTGCTCCCCCTGGCTTGCTCAGCCTGCTCTCTTATAG  539

seq1  AACCCCAAGACTACCAGCCCAGAGATGGTCCCACCTACAGTGGGTCCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCAAGACTACCAGCCCAGAGATGGTCCCACCTACAGTGGGTCCTCC  589

seq1  CCACTTGATCACTAATTGAGAAAATGCCCCACAGCTGGATCTCATGGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTGATCACTAATTGAGAAAATGCCCCACAGCTGGATCTCATGGAGA  639

seq1  CATTTCCCCAACTGAAACTCTTTATTCTGTAATAACTCCAGCTTGTGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCCCAACTGAAACTCTTTATTCTGTAATAACTCCAGCTTGTGTCA  689

seq1  AGTTGACACAAAACTAGCCAGTACACTACCCTACATTCACTTATTTTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGACACAAAACTAGCCAGTACACTACCCTACATTCACTTATTTTTAT  739

seq1  AATAGCTAATATTCCCAAAGGAAGACCCTGATTTCCTCTCCCTTTGAACG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTAATATTCCCAAAGGAAGACCCTGATTTCCTCTCCCTTTGAACG  789

seq1  TAGCTTTCCATGCCATACTAATCACACCAGCCCCTTACTGTCCATCCTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTTCCATGCCATACTAATCACACCAGCCCCTTACTGTCCATCCTCC  839

seq1  TGCCTTCCCACAAGCCGATATTCTGGTTCCTACGAGGGTTTAGACAGAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCCCACAAGCCGATATTCTGGTTCCTACGAGGGTTTAGACAGAAG  889

seq1  TTCCCATTGTTTTATGAGATTATTTAAAAAAAATACAAGTTAGAATAATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCATTGTTTTATGAGATTATTTAAAAAAAATACAAGTTAGAATAATT  939

seq1  TCCTTGAAAGAGATAATGATGCTTTTTAGAAAGAAGGAAAGCAACCAAAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGAAAGAGATAATGATGCTTTTTAGAAAGAAGGAAAGCAACCAAAG  989

seq1  AGTTTTAAAAGACAAACTAAGGGTCAAATAAGTACTGAGATATAAAAATG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAAAAGACAAACTAAGGGTCAAATAAGTACTGAGATATAAAAATG  1039

seq1  CTTCCCCAAACTCTTAACTGTTATTACAACATTCTAAGAAGATTCAACTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCAAACTCTTAACTGTTATTACAACATTCTAAGAAGATTCAACTT  1089

seq1  CATGTTTTCTTTGAATTC  1118
      ||||||||||||||||||
seq2  CATGTTTTCTTTGAATTC  1107