BAC Information

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BAC

Clone NameB6Ng01-108J05
Chromosome13 (Build37)
Map Location 65,657,003 - 65,657,418
singlet/doubletsinglet
Overlap genenone
Upstream genePpia-ps13_866.1, LOC238678, LOC631470, Cntnap3, EG432767, 4930458L03Rik, LOC218301, LOC628515, 4932441B19Rik, Gm274, Hiatl1, LOC100042311, Olfr465-ps1, Olfr466, Nlrp4f, ENSMUSG00000074847, Zfp369, LOC100042347, LOC100042341, LOC665738, EG665742, LOC665750, LOC665753, EG544944, EG665767, LOC665777
Downstream geneEG628648, LOC665809, LOC100042404, LOC628722, LOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746, LOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108J05.bB6Ng01-108J05.g
ACCDH915726DH915727
length1,179410
definitionDH915726|Mus musculus domesticus DNA, BAC clone: B6Ng01-108J05, 5' end.DH915727|Mus musculus domesticus DNA, BAC clone: B6Ng01-108J05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcattgtcttttattttgtccccattttcattgtagatttcat
taatttggatatcctctatcttttaataagttgttgtctatcttgactaa
taaaaggctcaaaggccatctccatgtttcattaattctttgtagtcttc
tctttctattttattgatttcagcccccaatttgataatttccggaagtc
tactcccttttttcattgctccctcgcttctttctgttctagactttaaa
gcatgctgctaaattgccagtatgagagctctccaattttttcatgaagg
cattctgttctatgaatgtttttcttagcaccactttcattttctttgtg
ttccataagattgtgcattgttgctcaattgttgtccttttcattgaatt
ctaaaaagtctctattttcttcctttatttctgtcttaacatttctttca
ttcattagtgaggtgtgtaacctccatgagtttgtaagctttgtgttctc
tttgtttttttgatatccagttgttatccatggtggtctgataagataca
gttgttctttcagttttattgtatgtatagagaattgcaatgtgtctgaa
tgtgtggtcagtttataagtaagtttcatgaggtgctgagcagaaggtat
attctcgtatatttcagttgaacgttctctaaataccagctggattcatg
ttcatgttgtcagttaactggactaattctttgtttagttttggtctgaa
gaatttgtcaattggtgggagtggggtattaaaatatctgagtatgaatg
tatgacactcattatgtgattttagctttaaaactgtttcttttacaaag
ttggtgacgatatgtttaaaggcatagatgttaaaatttaatgtcatctt
ttggtgtttttttttctcctttgagaatctatagtgtcttctccattctt
tgatactttttgttaaaatctgtttgctgtattgtaatggctgtaccagt
ttgcttcttgatcatttcttggatgtctttttaccacctttacttgagta
tgcctatctgaagttgagctatattattgaatcataaggtgattcgttta
accccattcctgtctactgtggtccgttatggcaactgagttcataatat
atcaagagcatgaagctactccctgattg
cagtacagccagggctacacagagaaaccctgtctcagaaaaccaaaaat
aaataaataaatccatatatcaaccagtaacccgggtataaaacacccag
ccaaacagcacaaacccagaaaccaaatcacctcaaacatagaggcctag
acaccagcaaatgaataaaatgaataatagccaggaaaatatatcaccaa
gaaatctaagctatcctatcacagcaggtcctgagaaattaaaacatgca
atagatacagtggaaaaatggttgtttgggcgaagggaaaagagtgaaaa
cataggggaaggtatagctgtgcacaaaagagctttagacaggcacacag
acagagagcagagagagacagccccaagggtagggaaatagaatgggggt
tgggggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_65657003_65657418
seq2: B6Ng01-108J05.g_69_484

seq1  GAATTCCAGTACAGCCAGGGCTACACAGAGAAACCCTGTCTCAGAAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTACAGCCAGGGCTACACAGAGAAACCCTGTCTCAGAAAACC  50

seq1  AAAAATAAATAAATAAATCCATATATCAACCAGTAACCCGGGTATAAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAATAAATAAATCCATATATCAACCAGTAACCCGGGTATAAAAC  100

seq1  ACCCAGCCAAACAGCACAAACCCAGAAACCAAATCACCTCAAACATAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGCCAAACAGCACAAACCCAGAAACCAAATCACCTCAAACATAGAG  150

seq1  GCCTAGACACCAGCAAATGAATAAAATGAATAATAGCCAGGAAAATATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGACACCAGCAAATGAATAAAATGAATAATAGCCAGGAAAATATAT  200

seq1  CACCAAGAAATCTAAGCTATCCTATCACAGCAGGTCCTGAGAAATTAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAGAAATCTAAGCTATCCTATCACAGCAGGTCCTGAGAAATTAAAA  250

seq1  CATGCAATAGATACAGTGGAAAAATGGTTGTTTGGGCGAAGGGAAAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAATAGATACAGTGGAAAAATGGTTGTTTGGGCGAAGGGAAAAGAG  300

seq1  TGAAAACATAGGGGAAGGTATAGCTGTGCACAAAAGAGCTTTAGACAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACATAGGGGAAGGTATAGCTGTGCACAAAAGAGCTTTAGACAGGC  350

seq1  ACACAGACAGAGAGCAGAGAGAGACAGCCCCAAGGGTAGGGAAATAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGACAGAGAGCAGAGAGAGACAGCCCCAAGGGTAGGGAAATAGAAT  400

seq1  GGGGGTTGGGGGGGGA  416
      ||||||||||||||||
seq2  GGGGGTTGGGGGGGGA  416