BAC Information

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BAC

Clone NameB6Ng01-110G19
Chromosome13 (Build37)
Map Location 37,621,504 - 37,847,358
singlet/doubletdoublet
Overlap geneLOC100042802, LOC100041624
Upstream geneFars2, LOC666758, Nrn1, F13a1, Ly86, LOC100042794, LOC100042800
Downstream geneRreb1, Ssr1, Cage1, Riok1, Dsp, 6530403A03Rik, Bmp6, Txndc5, Muted, Eef1e1, LOC621102
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110G19.bB6Ng01-110G19.g
ACCDH917051DH917052
length190108
definitionDH917051|Mus musculus domesticus DNA, BAC clone: B6Ng01-110G19, 5' end.DH917052|Mus musculus domesticus DNA, BAC clone: B6Ng01-110G19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,847,169 - 37,847,358)(37,621,504 - 37,621,611)
sequence
attaaaaatgactaaatatccccccccctttttttttcaagacagggttt
ctctgtatggctctggctgtcctgtaactcactttgtagaccaggctggc
ctcgaattcagaaatccacctgcctctgcctcctgagtgctgggattaaa
ggtgtgcgccatcacgtctggctacttcttattcttaatg
actgtgtcaccaataagacacaacaaacaaactccatgtctgaagaaagg
aggaggaggaggaagaagaagaggacggagaggaggaagaggaggaagag
gagggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_37847169_37847358
seq2: B6Ng01-110G19.b_49_238 (reverse)

seq1  CATTAAGAATAAGTGGTAGCCAGGCGTGGTGGCGCACACCTTTAATCCCA  50
      |||||||||||||  |||||||| |||| |||||||||||||||||||||
seq2  CATTAAGAATAAGAAGTAGCCAGACGTGATGGCGCACACCTTTAATCCCA  50

seq1  GCACTCAGGAGGCAGAGGCAGGTGGATTTCTGAATTCGAGGCCAGCCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCAGGAGGCAGAGGCAGGTGGATTTCTGAATTCGAGGCCAGCCTGG  100

seq1  TCTACAAAGTGAGTTCCAGGACAGCCAGAGCCATACAGAGAAACCCTGTC  150
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TCTACAAAGTGAGTTACAGGACAGCCAGAGCCATACAGAGAAACCCTGTC  150

seq1  TTGAAAAAAAAAGGGGGGGGGATATTTAGTCATTTTTAAT  190
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAAAAAAGGGGGGGGGATATTTAGTCATTTTTAAT  190

seq1: chr13_37621504_37621611
seq2: B6Ng01-110G19.g_70_177

seq1  ACTGTGTCACCAATAAGACACAACAAACAAACTCCATGTCTGAAGAAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGTCACCAATAAGACACAACAAACAAACTCCATGTCTGAAGAAAGG  50

seq1  AGGAGGAGGAGGAAGAAGAAGAGGACGGAGAGGAGGAAGAGGAGGAAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAGGAGGAAGAAGAAGAGGACGGAGAGGAGGAAGAGGAGGAAGAG  100

seq1  GAGGGAGA  108
      ||||||||
seq2  GAGGGAGA  108