BAC Information

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BAC

Clone NameB6Ng01-111F07
Chromosome13 (Build37)6 (Build37)
Map Location 51,312,234 - 51,312,91473,828,731 - 73,828,970
singlet/doubletsingletsinglet
Overlap geneLOC667733
Upstream geneLOC100040118, Gm906, 2310081J21Rik, LOC676954, LOC667625, LOC667632, EG667637, Fbxw17, Gm806, EG639044, Gm904, LOC100040315, EG667693, LOC100040161, LOC100040190, EG667712, LOC676997, EG667717, Spin1, 4930519N16Rik, EG667728
Downstream genePpia-ps13_636.1, LOC625524, Edg3, Shc3, Cks2, Secisbp2, Sema4d, Gadd45g
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111F07.bB6Ng01-111F07.g
ACCDH917702DH917703
length691270
definitionDH917702|Mus musculus domesticus DNA, BAC clone: B6Ng01-111F07, 5' end.DH917703|Mus musculus domesticus DNA, BAC clone: B6Ng01-111F07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(51,312,234 - 51,312,914)(73,828,731 - 73,828,970)
sequence
gaattcctagtaggtggatataagctttagaaaaattggtacttttgaaa
agatgtgcgtgtgtgcatgtatgtgcgcacgcctgtgtgcttgccttgac
aaaagcagtttaaatgagagagggtctgtattttccaccagagaaggcat
ggcagtcggagcctgaggctctgggtcagttgccaccctcaaccaggaat
cagagagtaatgaatgcttgtgcttattggcccacatcctttggtgcagg
tcagaacaccaacccaggggatggtgaaatccggctttagggtggtcttt
cctacctcggttaacttcttctaggaccccgcccccccccccccccccac
cctcacacatatgcccagaggctgctctcctagctgattcttgaccctgt
gaagatgttaatcaaattaagtggcatctctggccacctttgacgatatg
agtgtttggaaacgtgaccctgctcttccgtggtgggtgacctaaaccta
actactttcttctgcttgtcgtgagggggcaagactcacccatgagaatt
taactgctcccgttagcttttggatacttgacctgaatataaacacctga
aaatgacaccctgggcagtaccacccctgtcccttggggtcaggatgcta
tacaaaatcaaacccctgaatgtcattcctccgcggcgtct
tgtatgtatgtgtgtgtaaaagcgggtgtgagaacaaagacaactaaaga
ctgccaaaagaatgagaatcggctctgcctggggatgaagcccctaatta
gctgttttatacaaagcagtaagccctgaaatcacatgcacataaacaac
ataaaagcgctttccttgtacatccatgcacacagcaaaacactgctgtt
gctgctgctgctgctgctgagccatgaaattgaaaggggtacggggtatg
gggatgggaataattggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_51312234_51312914
seq2: B6Ng01-111F07.b_53_732

seq1  AGGTGGATATAAGCTTAGAGAAAAGTTGGTACTTTTGAAAAGATGTGCGT  50
      ||||||||||||||||  |||||| |||||||||||||||||||||||||
seq2  AGGTGGATATAAGCTT-TAGAAAAATTGGTACTTTTGAAAAGATGTGCGT  49

seq1  GTGTGCATGTATGTGCGCACGCCTGTGTGCTTGCCTTGACAAAAGCAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCATGTATGTGCGCACGCCTGTGTGCTTGCCTTGACAAAAGCAGTT  99

seq1  TAAATGAGAGAGGGTCTGTATTTTCCACCAGAGAAGGCATGGCAGTCGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAGAGAGGGTCTGTATTTTCCACCAGAGAAGGCATGGCAGTCGGA  149

seq1  GCCTGAGGCTCTGGGTCAGTTGCCACCCTCAACCAGGAATCAGAGAGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAGGCTCTGGGTCAGTTGCCACCCTCAACCAGGAATCAGAGAGTAA  199

seq1  TGAATGCTTGTGCTTAGTGGCCCACATCCTTTGGTGCAGGTCAGAACACC  250
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGAATGCTTGTGCTTATTGGCCCACATCCTTTGGTGCAGGTCAGAACACC  249

seq1  AGCCCAGGGGATGGTGAAGTCCAGCTTTAGGGTGGTCTTTCCTACCTCGG  300
      | |||||||||||||||| ||| |||||||||||||||||||||||||||
seq2  AACCCAGGGGATGGTGAAATCCGGCTTTAGGGTGGTCTTTCCTACCTCGG  299

seq1  TTAACTTCTTCTAGGACCCCGCCCCCCCCCCCCCCCCCACTCACACACAT  350
      |||||||||||||||||||||||||||||||||||||||| | |||||||
seq2  TTAACTTCTTCTAGGACCCCGCCCCCCCCCCCCCCCCCACCCTCACACAT  349

seq1  ATGCCCAGAGGCTGCTCTCCTAGCTGATTCTTGACCCTGTGAAGATGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATGCCCAGAGGCTGCTCTCCTAGCTGATTCTTGACCCTGTGAAGATGTTA  399

seq1  ATCAAATTAGGTGGCATCTCTGGCCACCTTTGAAAACAGTCAGTGTTTGG  450
      ||||||||| |||||||||||||||||||||||  | | | |||||||||
seq2  ATCAAATTAAGTGGCATCTCTGGCCACCTTTGACGATA-TGAGTGTTTGG  448

seq1  AAACGTGACCCTGCTCCAGTGTGGTGGGTGACAGCAGCCTAACTACTTTC  500
      ||||||||||||||||    ||||||||||||   | |||||||||||||
seq2  AAACGTGACCCTGCTCTTCCGTGGTGGGTGACCTAAACCTAACTACTTTC  498

seq1  TAGTCATTGTCATGAACAGGCAGGTCACAGCCATGAGAATTTAACTGTTC  550
      |  |  ||||| |||   |||| | | || ||||||||||||||||| ||
seq2  TTCTGCTTGTCGTGAGGGGGCAAGACTCACCCATGAGAATTTAACTGCTC  548

seq1  AGGTTAGCTTTTGTCAACTTGACCCAAATATAGACACCTGAGAA-GTGAC  599
        |||||||||||   ||||||||  |||||| |||||||| || |  ||
seq2  CCGTTAGCTTTTGGATACTTGACCTGAATATAAACACCTGAAAATGACAC  598

seq1  CGTGGGCGGTACCACCCCTGAGCAGGGGGTTCTGGATGCTATACAAAAGC  649
      | ||||| ||||||||||||  |   ||| || ||||||||||||||| |
seq2  CCTGGGCAGTACCACCCCTGTCCCTTGGGGTCAGGATGCTATACAAAATC  648

seq1  AAGCCGGTAAGCAGCGTTCCTCCGCGGCGTCT  681
      || ||  | |    | ||||||||||||||||
seq2  AAACCCCTGAATGTCATTCCTCCGCGGCGTCT  680

seq1: chr6_73828731_73828970
seq2: B6Ng01-111F07.g_104_343

seq1  AGAACAAAGACAACTAAAGACTGCCAAAAGAATGAGAATCGGCTCTGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAAGACAACTAAAGACTGCCAAAAGAATGAGAATCGGCTCTGCCT  50

seq1  GGGGATGAAGCCCCTAATTAGCTGTTTTATACAAAGCAGTAAGCCCTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATGAAGCCCCTAATTAGCTGTTTTATACAAAGCAGTAAGCCCTGAA  100

seq1  ATCACATGCACATAAACAACATAAAAGCGCTTTCCTTGTACATCCATGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATGCACATAAACAACATAAAAGCGCTTTCCTTGTACATCCATGCA  150

seq1  CACAGCAAAACACTGCTGTTGCTGCTGCTGCTGCTGCTGAGCCATGAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAAAACACTGCTGTTGCTGCTGCTGCTGCTGCTGAGCCATGAAAT  200

seq1  TGAAAGGGGTACGGGGTATGGGGATGGGAATAATTGGGGT  240
      ||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGGGTACGGGGTATGGGGATGGGAATAATTGGGGT  240