BAC Information

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BAC

Clone NameB6Ng01-113F13
Chromosome13 (Build37)
Map Location 46,287,921 - 46,288,927
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039533, Mylip, Gmpr, Atxn1, 5033430I15Rik, ENSMUSG00000062282
Downstream geneGm1574, Rbm24, Cap2, C78339, Nup153, Kif13a, LOC544928, Nhlrc1, Tpmt, Aof1, Dek, LOC100039761, Ibrdc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113F13.bB6Ng01-113F13.g
ACCDH919166DH919167
length9901,161
definitionDH919166|Mus musculus domesticus DNA, BAC clone: B6Ng01-113F13, 5' end.DH919167|Mus musculus domesticus DNA, BAC clone: B6Ng01-113F13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttacttccaatgcctgataccatatctagcataaagtgcataa
aaagtatctataaaatagatcaaccatgtgctctcttgtccctccctccc
tttcttcgtccctccctccctccctttctccattttctatttattttgct
agccaacttcatattgcaagcatataacaaaacaataaatacaatgatgt
gaaattgcaagcccatgctgcttcatggtccccgtgggttcttcctctat
cgcagctttaaatgaagggaggagctgctcatgccaagctatctcggcac
agtagctatgtctgagatctaaactgcatttaggccaaagggtttcactt
ttccagtcttctaccagcacggctgaaacagaaacgtatacacattgctt
tgaatataggttgttccctctttgttcagggagtgctgatgcactttaaa
atgagttaacgataattcctcttagcttagaatcaaactgaatagctatg
ccatagaaagatgctagtgggtttgaaccctttggttttaccagcacaga
aaatatgctaacaggaaaatgttcttcttggtgtgtctgtgcttggaagc
ttagccagagtcagtaatatctatgaggaagatgttggcctgggacagaa
acttgcccaccaccatcctaaaagcagaacacagactgaaggcagctgcc
aggctgagcactgagctctgttgtataactccactgcccaccaagcacac
agaacagctttgtccccacacatactctgtgcagctcacttgggattact
catctatgcccatctttgcccagacagcagagagacagctacctgagagc
tgttgctatatggaaaatgcaagtgcccagctctgggtctgggcatgcca
atccttacctaccagttttatttgtcattggaaatcaggcattcagtgag
agagcggctttatagttcaggagaactaaagacgttgaca
gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgcggagtccccgccctgcgtagtgcgtcagcc
ctgcgcagagaggcagtgcgcagactcattcattcccagagaggaacaaa
ggaaaatacaacaggcatttccggtctttgaaggagccgagggtgggcgt
gtccatgctccggtagaatacttacaaattaaagaaattgccgagtcggt
ccgtaaatacggaaccaatgctaattttaccttggtgcagttagacaggc
tcgccggcatggcactaactcctgccgactggcaaacggttgtaaaagcc
gctctccctagtatgggcaaatatatggaatggagagcgctttggcacga
agctgcacaagcgcaggcccgagcaaacgcagctgctttgactccagagc
agagagattggacttttgacttgttaacgggtcagggagcttattctgct
gatcagacaaactaccattggggagcttatgcccagatttcttccacggc
tattagggcctggaaggcgctctctcgagcaggtgaaaccactgggcagt
taacaaagataatccagggacctcaggaatccttctcagattttgtggcc
agaatgacagaggcagcagagcgtatttttggagagtcagagcaagctgc
gcctctgatagaacagctaatctatgagcaagccacaaggagtgcccgag
cggccatagcccctagaaagaacaaaggcttacagactggctcagggtct
gtcgagagcctgggggaactctcagcaatgcaggtttagcgctgccatcc
tccaatctcagaaccgctccatgggcagaaatgatcagaggacatgtttt
aattgccgaaagcctgggcatttaagaaagattgcgaagcctcagaaaaa
cagggagggactctcactcttggctcttaggtgggcaaggtaatctagac
ctaaccagtgtccgtctgggagggaaatataaaggcggagccttccccac
ccgtagagtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_46287921_46288927
seq2: B6Ng01-113F13.b_50_1039

seq1  GAATTCTTTACTTCCAATGCCTGATACCATATCTAGCATAAAGTGCATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTACTTCCAATGCCTGATACCATATCTAGCATAAAGTGCATAA  50

seq1  AAAGTATCTATAAAATAGATCAACCATGTGCTCTCTTGTCCCTCCCTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATCTATAAAATAGATCAACCATGTGCTCTCTTGTCCCTCCCTCCC  100

seq1  TTTCTTCGTCCCTCCCTCCCTCCCTTTCTCCATTTTCTATTTATTTTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCGTCCCTCCCTCCCTCCCTTTCTCCATTTTCTATTTATTTTGCT  150

seq1  AGCCAACTTCATATTGCAAGCATATAACAAAACAATAAATACAATGATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAACTTCATATTGCAAGCATATAACAAAACAATAAATACAATGATGT  200

seq1  GAAATTGCAAGCCCATGCTGCTTCATGGTCCCCGTGGGTTCTTCCTCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTGCAAGCCCATGCTGCTTCATGGTCCCCGTGGGTTCTTCCTCTAT  250

seq1  CGCAGCTTTAAATGAAGGGAGGAGCTGCTCATGCCAAGCTATCTCGGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGCTTTAAATGAAGGGAGGAGCTGCTCATGCCAAGCTATCTCGGCAC  300

seq1  AGTAGCTATGTCTGAGATCTAAACTGCATTTAGGCCAAAGGGTTTCACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCTATGTCTGAGATCTAAACTGCATTTAGGCCAAAGGGTTTCACTT  350

seq1  TTCCAGTCTTCTACCAGCACGGCTGAAACAGAAACGTATACACATTGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTCTTCTACCAGCACGGCTGAAACAGAAACGTATACACATTGCTT  400

seq1  TGAATATAGGTTGTTCCCTCTTTGTTCAGGGAGTGCTGATGCACTTTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATAGGTTGTTCCCTCTTTGTTCAGGGAGTGCTGATGCACTTTAAA  450

seq1  ATGAGTTAACGATAATTCCTCTTAGCTTAGAATCAAACTGAATAGCTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTAACGATAATTCCTCTTAGCTTAGAATCAAACTGAATAGCTATG  500

seq1  CCATAGAAAGATGCTAGTGGGTTTGAACCCTTTGGTTTTACCAGCACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGAAAGATGCTAGTGGGTTTGAACCCTTTGGTTTTACCAGCACAGA  550

seq1  AAATATGCTAACAGGAAAATGTTCTTCTTGGTGTGTCTGTGCTTGGAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGCTAACAGGAAAATGTTCTTCTTGGTGTGTCTGTGCTTGGAAGC  600

seq1  TTAGCCAGAGTCAGTAATATCTATGAGGAAGATGTTGGCCTGGGACAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCAGAGTCAGTAATATCTATGAGGAAGATGTTGGCCTGGGACAGAA  650

seq1  ACTTGCCCACCACCATCCTAAAAGCAGAACACAGACTGAAGGCAGCTGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCCCACCACCATCCTAAAAGCAGAACACAGACTGAAGGCAGCTGCC  700

seq1  AGGCTGAGCACTGAGCTCTGTTGTATAACTCCACTGCCAACCAAGCACAC  750
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGGCTGAGCACTGAGCTCTGTTGTATAACTCCACTGCCCACCAAGCACAC  750

seq1  AGAACAGCTTTGTCCCCACACATACTCTGTGCAGCTCACTT-GGATTACT  799
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGAACAGCTTTGTCCCCACACATACTCTGTGCAGCTCACTTGGGATTACT  800

seq1  CATCTATGCCCATCTTTGCCCAGACAGCAGAGAGACAGCTACCTGAGAGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATGCCCATCTTTGCCCAGACAGCAGAGAGACAGCTACCTGAGAGC  850

seq1  TGTTGCTATATGGTAAAATGCAAGGTGCCCAGCTTCTGGGTTCTGGGCCA  899
      ||||||||||||| ||||||||| ||||||||| |||||| |||||| ||
seq2  TGTTGCTATATGG-AAAATGCAA-GTGCCCAGC-TCTGGG-TCTGGG-CA  895

seq1  TGCCAATCCCTTACCTACCAGTTTTTATTTTGTCATTTGGAAAAATCAGG  949
      ||||||| |||||||||||||||||   ||||||||| |   |||||| |
seq2  TGCCAAT-CCTTACCTACCAGTTTT--ATTTGTCATTGG---AAATCA-G  938

seq1  GCATTCAAGTGGAGGAGAG-GCGGCTTTATAAGTTCAGGAGAACTAAAGA  998
      |||||| |||    ||||| |||||||||| |||||||||||||||||||
seq2  GCATTC-AGT----GAGAGAGCGGCTTTAT-AGTTCAGGAGAACTAAAGA  982

seq1  CGGCTGACA  1007
      | | |||||
seq2  C-GTTGACA  990