BAC Information

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BAC

Clone NameB6Ng01-114I18
Chromosome13 (Build37)
Map Location 67,516,543 - 67,517,707
singlet/doubletsinglet
Overlap geneZfp459
Upstream gene2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik
Downstream geneC330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114I18.bB6Ng01-114I18.g
ACCDH920041DH920042
length1,1971,166
definitionDH920041|Mus musculus domesticus DNA, BAC clone: B6Ng01-114I18, 5' end.DH920042|Mus musculus domesticus DNA, BAC clone: B6Ng01-114I18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatattgaatggctgagaagcacctaataaaatg
ttcaacattcttaatcattagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagggcaaaaactcaggtgacagc
agatgctggcgaggatgtgaagaaagaggaacactcctccattgctggtg
ggattgcaagctggtacaaccactctggaaatcagtttggcttttcctca
gaaaattggacacagtactaccagaagatccatcaataccactcctgggc
atatacccagaagatgcttcaacatgtaataaggacacatgctccactat
gttcatagcagccatatttatagtagacagaatctggaaagaacccagat
gtccctcaacggaggaagggatacaggaaatgtggtacatttacacaatg
gagtactacttagctattaaaaacaatgaattcatgaaattcttagacaa
atggatgtatctgaaggctatcatcctgagtgaggtaacacaatcacaaa
agaacacacatgatatacactcactgataagtggatattagcccagaagc
tcggaatacccaagatacaattcaaaaaacacatgaaattcaagaaggaa
ggccaaagtgtgaatacttcagtccttcttagaaagaggaacaaaatacc
catggaaggagttacagagacaaagtgtgaagcagagactgaaggaatga
ccatccagagactgcctcacctggagatccatcccataaacaaccaccaa
aaccagacactattgtagatgccaacaagtgcttgctgacaggagcctat
atagctgtctcctgagaggctcggctagtgcctaacaacacagaagtgga
tgctcacagccatccattgaactgagcacaggtccccaatgaaggagcta
gagaaagtacccagaagctgaacagtttggagacccatagaggacacata
tgaactaccagtatctccagagctcactggggctaaacaccaccaagaaa
tacatgtgactatgctctatctgcaatgtagtaaagatgcctagtgtcat
catgggaggagagcccttgtctgtgaaagttctatgcccagtaggactgt
cagcccagaagaaagattggtgcttgtgaacagggggatgaggatcg
gaattcatgtattaatttggtattttgttataattgcgtgagttggctgt
gaattgttgcatgccggcctgcggcctatttgaaacgggtacacctggga
ggcaggctaggggctgaaagagacttagatggagagaggttaatggagac
caagacataattctgttcaaagcccgccagtttactaagagagtgtgctt
ataaggggggaaggcccatgttctgccagtccattcctggtgtctggaac
cagccagtaggggacatgcagaataggatgttcccctggaatatctcagg
cgcctctcagcaggtagcagtgtcttggaggaagcagtggaacatgacag
aacaaaagagccatctatgtcggaaggctccaccctaggtaatcttctta
gtgggagcaaggtcaaagtctggaccagcttgcttcagggctgagtgagg
ctacattgaattgtcttagttttgctattgtcatctcaaatactatcttc
tcgaatataccccacataatccttacacacctccggcattcggggcaaca
ggactgggagcttctccctgtcacactgttccagagcatccattgctcag
gatgtccccaagccctggcttccttgtgtcactggtcagtaggaaaaacc
attacatctccaccttttgtgagttacaattccttatatttcaatatctc
taacttctgcgagtttcagctcattacatttaacaaattgacgagatcac
atggtacctatcgttgtcaggtacttacctgaagtaattttcagcctcac
ccatactgtcacaactgacaagtctgtattttttgttctctgaaaaatta
ttgaattaaaaaataatttcgggctggtgagatggctcagtgggtaagag
cacccgactgctcttccgaaggtccagagttcaaatcccagcaaccacat
ggtggctcacaccattttgtaacaagatctgacgctctttttctggagtg
tctgaagacagctacaggtgtacttacatataattaaataaataattctt
ttaaaaaaaaaaaagaaagaaagaacatggtttaaaaaaaaaaaatttca
tcattcccctccatctactcattggaacttctcttcctgtcttccaagcc
ttatctctatctagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67516543_67517707
seq2: B6Ng01-114I18.g_68_1233

seq1  GAATTCATGTATTAATTTGGTATTTTGTTATAATTGCGTGAGTTGGCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTATTAATTTGGTATTTTGTTATAATTGCGTGAGTTGGCTGT  50

seq1  GAATTGTTGCATGCCGGCCTGCGGCCTATTTGAAACGGGTACACCTGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGTTGCATGCCGGCCTGCGGCCTATTTGAAACGGGTACACCTGGGA  100

seq1  GGCAGGCTAGGGGCTGAAAGAGACTTAGATGGAGAGAGGTTAATGGAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGCTAGGGGCTGAAAGAGACTTAGATGGAGAGAGGTTAATGGAGAC  150

seq1  CAAGACATAATTCTGTTCAAAGCCCGCCAGTTTACTAAGAGAGTGTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACATAATTCTGTTCAAAGCCCGCCAGTTTACTAAGAGAGTGTGCTT  200

seq1  ATAAGGGGGGAAGGCCCATGTTCTGCCAGTCCATTCCTGGTGTCTGGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGGGGGAAGGCCCATGTTCTGCCAGTCCATTCCTGGTGTCTGGAAC  250

seq1  CAGCCAGTAGGGGACATGCAGAATAGGATGTTCCCCTGGAATATCTCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGTAGGGGACATGCAGAATAGGATGTTCCCCTGGAATATCTCAGG  300

seq1  CGCCTCTCAGCAGGTAGCAGTGTCTTGGAGGAAGCAGTGGAACATGACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTCTCAGCAGGTAGCAGTGTCTTGGAGGAAGCAGTGGAACATGACAG  350

seq1  AACAAAAGAGCCATCTATGTCGGAAGGCTCCACCCTAGGTAATCTTCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAGAGCCATCTATGTCGGAAGGCTCCACCCTAGGTAATCTTCTTA  400

seq1  GTGGGAGCAAGGTCAAAGTCTGGACCAGCTTGCTTCAGGGCTGAGTGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAGCAAGGTCAAAGTCTGGACCAGCTTGCTTCAGGGCTGAGTGAGG  450

seq1  CTACATTGAATTGTCTTAGTTTTGCTATTGTCATCTCAAATACTATCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTGAATTGTCTTAGTTTTGCTATTGTCATCTCAAATACTATCTTC  500

seq1  TCGAATATACCCCACATAATCCTTACACACCTCCGGCATTCGGGGCAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAATATACCCCACATAATCCTTACACACCTCCGGCATTCGGGGCAACA  550

seq1  GGACTGGGAGCTTCTCCCTGTCACACTGTTCCAGAGCATCCATTGCTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGGGAGCTTCTCCCTGTCACACTGTTCCAGAGCATCCATTGCTCAG  600

seq1  GATGTCCCCAAGCCCTGGCTTCCTTGTGTCACTGGTCAGTAGGAAAAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCCCCAAGCCCTGGCTTCCTTGTGTCACTGGTCAGTAGGAAAAACC  650

seq1  ATTACATCTCCACCTTTTGTGAGTTACAATTCCTTATATTTCAATATCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATCTCCACCTTTTGTGAGTTACAATTCCTTATATTTCAATATCTC  700

seq1  TAACTTCTGCGAGTTTCAGCTCATTACATTTAACAAATTGACGAGATCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCTGCGAGTTTCAGCTCATTACATTTAACAAATTGACGAGATCAC  750

seq1  ATGGTACCTATCGTTGTCAGGTACTTACCTGAAGTAATTTTCAGCCTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTACCTATCGTTGTCAGGTACTTACCTGAAGTAATTTTCAGCCTCAC  800

seq1  CCATACTGTCACAACTGACAAGTCTGTATTTTTTGTTCTCTGAAAAATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACTGTCACAACTGACAAGTCTGTATTTTTTGTTCTCTGAAAAATTA  850

seq1  TTGAATTAAAAAATAATTTCGGGCTGGTGAGATGGCTCAGTGGGTAAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTAAAAAATAATTTCGGGCTGGTGAGATGGCTCAGTGGGTAAGAG  900

seq1  CACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACAT  950

seq1  GGTGGCTCACAACCATCTGTAACAAGATCTGACGC-CCTCTTCTGGAGTG  999
      ||||||||||| |  | |||||||||||||||||| | | ||||||||||
seq2  GGTGGCTCACACCATTTTGTAACAAGATCTGACGCTCTTTTTCTGGAGTG  1000

seq1  TCTGAAGACAGCTACA-GTGTACTTACATATAA-TAAATAAATAAATCTT  1047
      |||||||||||||||| |||||||||||||||| ||||||||||| ||||
seq2  TCTGAAGACAGCTACAGGTGTACTTACATATAATTAAATAAATAATTCTT  1050

seq1  TAAAAAAAAAAAAAGAAAGAAAGAAACAATGTTT-AAAAAAAAAAATTTC  1096
      | ||||||||||||||||||||| ||||  |||| |||||||||||||||
seq2  TTAAAAAAAAAAAAGAAAGAAAG-AACATGGTTTAAAAAAAAAAAATTTC  1099

seq1  ATCATTTCCCCTCCATCTACTCATTGAAACTTCTC-TCCTGTCTGCCAAG  1145
      |||| ||||||||||||||||||||| |||||||| |||||||| |||||
seq2  ATCA-TTCCCCTCCATCTACTCATTGGAACTTCTCTTCCTGTCTTCCAAG  1148

seq1  CCTTCATCTCAAATCTAGGA  1165
      |||| |||||  ||||||||
seq2  CCTT-ATCTC-TATCTAGGA  1166