BAC Information

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BAC

Clone NameB6Ng01-116J15
Chromosome13 (Build37)
Map Location 119,073,438 - 119,074,567
singlet/doubletsinglet
Overlap genenone
Upstream geneEG623365, LOC382807, Hcn1, LOC100041695, LOC674926
Downstream geneMrps30, LOC668309, LOC100041278, Fgf10, LOC100041298, LOC100041757
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116J15.bB6Ng01-116J15.g
ACCDH921559DH921560
length1,1451,128
definitionDH921559|Mus musculus domesticus DNA, BAC clone: B6Ng01-116J15, 5' end.DH921560|Mus musculus domesticus DNA, BAC clone: B6Ng01-116J15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcaattaccccaagatatttactcatatctgaagatgtagagc
cacttacaaaatgaaaaaaaacaacttttattatatgtatctgtttacat
atacatatattttacttaaatatacatttttttccttgggctaacagtgc
ttcctccaagaaccaaaggacatctaccataaatccaagcatcatgcatg
agaagcactcttttcagttgttagccgggtctgtcccagaacataatgcc
tactggtattgcctgtggttgcttcccagaggtggaaggaagtccttatt
actgcagactccatgcatttccgacgcccatcccagaggtctctgatctg
gaactactctggatgcctcctccttaaggactacctttccagtatccaga
aaacaacatgagagcttccaaaggagggaagcaacccacagtccaagcct
gctatgtcacaggtaaatcacagccaccagcatggcacagtaaccctatg
gtgaagtagtggtaggcatagtaactgctctctaatcagacataaggacc
gttcagcaagagggaagttgtgcctagtactgaaaacctagccacctacc
tacagctggtggagccatggattttggaggagagcctacaaccaacactt
taataaaccaccataatccctaactacattctaaatatttacccttatgc
tcacagagaaatgtagtcctcacccctcatcaagtaaatttctccttgta
acagacaggaacgatttcagaaaactacctctggacaaaatgcagaattg
tggagcccaattccagtgaatataaccacaaacaaaacaaaacaaaacaa
aacaaacataacaaacaaacaatcaaacaaacaaacaaacaaacaaaccc
tccacataccagctcagggctattgcaaaaggggaatggagaagttgtta
gaccagagactccgggattttgctgtgacatttcctgctaatattcagaa
gctacacccataagtctctcacaacatgacttctaaaatagcagagatca
taacaaacatgctaatatgtcagcctgaaacaacattcagttcaaacact
tataagacttcacagttctattagtttgtgtgttggtgtcgtcgt
gaattcttatcaaaagacaactccaagttacagtctccagtttaaaattg
ccaaagatccaataactattattgctgcttctccttttagtttatcttaa
ggcacattgagttttacttctgaaagtcagattactgaggaaaataaata
catgttaagacttaaatttgaatcatttgaccttgtacctgaatttggaa
taaatcactccatcataaaaataaaaaataaaaattttgacagcttaatg
acaattctgttgaagccttcaaagtgggaaaaccctcaggggaagtccac
ataccatatttcagtgtttatgatatgcagcccattcgtatgagaggctc
ttattggggaacatcagggagtgttgttgaaatatgctcaagcttcccca
catataaacttcttagctcagaggaactattaccaagggcttgatatttg
aatttctgtgcattcccagggcaaactgccttttcatcataagtcacagt
gttctggtacattgcaagacattgtgtcacctgcactgactctgtgacat
aaagtcaatcatgtcagcataagaactcatagctgatggttcctggagac
atgctgataccttctgtcaacatattccaaatcatacttttaacatagtt
accacatgttccatttttgcatttgctccagagactaatagaagcatgca
tagtcattatcatttaatcacatagaaattgttgtaatagtatattacaa
attgctttttgttattcagaagttccagcttgtgcatagaaagtcacatg
cctaagatagcaagtgataccttcataaacaattttttttctttgactcc
aatgcctagcttctactttacattttatcaatggaatcataacagaatca
tatattatacatacatctgcagcttacatactcttttcatgtatgcaaca
ttatgcatgctgcatacatatatgcactcaacactcatacacctatacac
atatacaataaatagcttataaccaacaaattctagcagtgctcatgact
tataatatgtgctcattttcaagcagccattgttgaatgaaggaattata
tatgaaaggttttcagtatctgaaacgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_119073438_119074567
seq2: B6Ng01-116J15.g_69_1196

seq1  GAATTCTTATCAAAAGACAACTCCAAGTTACAGTCTCCAGTTTAAAATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATCAAAAGACAACTCCAAGTTACAGTCTCCAGTTTAAAATTG  50

seq1  CCAAAGATCCAATAACTATTATTGCTGCTTCTCCTTTTAGTTTATCTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGATCCAATAACTATTATTGCTGCTTCTCCTTTTAGTTTATCTTAA  100

seq1  GGCACATTGAGTTTTACTTCTGAAAGTCAGATTACTGAGGAAAATAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACATTGAGTTTTACTTCTGAAAGTCAGATTACTGAGGAAAATAAATA  150

seq1  CATGTTAAGACTTAAATTTGAATCATTTGACCTTGTACCTGAATTTGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTAAGACTTAAATTTGAATCATTTGACCTTGTACCTGAATTTGGAA  200

seq1  TAAATCACTCCATCATAAAAATAAAAAATAAAAATTTTGACAGCTTAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCACTCCATCATAAAAATAAAAAATAAAAATTTTGACAGCTTAATG  250

seq1  ACAATTCTGTTGAAGCCTTCAAAGTGGGAAAACCCTCAGGGGAAGTCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCTGTTGAAGCCTTCAAAGTGGGAAAACCCTCAGGGGAAGTCCAC  300

seq1  ATACCATATTTCAGTGTTTATGATATGCAGCCCATTCGTATGAGAGGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCATATTTCAGTGTTTATGATATGCAGCCCATTCGTATGAGAGGCTC  350

seq1  TTATTGGGGAACATCAGGGAGTGTTGTTGAAATATGCTCAAGCTTCCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGGGGAACATCAGGGAGTGTTGTTGAAATATGCTCAAGCTTCCCCA  400

seq1  CATATAAACTTCTTAGCTCAGAGGAACTATTACCAAGGGCTTGATATTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAACTTCTTAGCTCAGAGGAACTATTACCAAGGGCTTGATATTTG  450

seq1  AATTTCTGTGCATTCCCAGGGCAAACTGCCTTTTCATCATAAGTCACAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTGTGCATTCCCAGGGCAAACTGCCTTTTCATCATAAGTCACAGT  500

seq1  GTTCTGGTACATTGCAAGACATTGTGTCACCTGCACTGACTCTGTGACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGTACATTGCAAGACATTGTGTCACCTGCACTGACTCTGTGACAT  550

seq1  AAAGTCAATCATGTCAGCATAAGAACTCATAGCTGATGGTTCCTGGAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCAATCATGTCAGCATAAGAACTCATAGCTGATGGTTCCTGGAGAC  600

seq1  ATGCTGATACCTTCTGTCAACATATTCCAAATCATACTTTTAACATAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGATACCTTCTGTCAACATATTCCAAATCATACTTTTAACATAGTT  650

seq1  ACCACATGTTCCATTTTTGCATTTGCTCCAGAGACTAATAGAAGCATGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACATGTTCCATTTTTGCATTTGCTCCAGAGACTAATAGAAGCATGCA  700

seq1  TAGTCATTATCATTTAATCACATAGAAATTGTTGTAATAGTATATTACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCATTATCATTTAATCACATAGAAATTGTTGTAATAGTATATTACAA  750

seq1  ATTGCTTTTTGTTATTCAGAAGTTCCAGCTTGTGCATAGAAAGTCACATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTTTTGTTATTCAGAAGTTCCAGCTTGTGCATAGAAAGTCACATG  800

seq1  CCTAAGATAGCAAGTGATACCTTCATAAACAATTTTTTTTCTTTGACTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGATAGCAAGTGATACCTTCATAAACAATTTTTTTTCTTTGACTCC  850

seq1  AATGCCTAGCTTCTACTTTACATTTTATCAATGGAATCATAACAGAATCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCTAGCTTCTACTTTACATTTTATCAATGGAATCATAACAGAATCA  900

seq1  TATATTTATACATACATCTGCAGCTTACATACTCTTTTCATGTATGCAAC  950
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TATA-TTATACATACATCTGCAGCTTACATACTCTTTTCATGTATGCAAC  949

seq1  A-TATGCATGCTGCATACATATATGCACTCAACACTCATACACCTATACA  999
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGCATGCTGCATACATATATGCACTCAACACTCATACACCTATACA  999

seq1  CATATACAATAAATAGCTTATAACCAACAAATTCTTAGCAGTGCTCATGA  1049
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CATATACAATAAATAGCTTATAACCAACAAATTC-TAGCAGTGCTCATGA  1048

seq1  CTATAAATTAATGTGCTCATTTTCAAGCAG-CATTGTTTGATGAAGGATT  1098
      ||   |||  |||||||||||||||||||| |||||||  |||||||| |
seq2  CTTATAAT--ATGTGCTCATTTTCAAGCAGCCATTGTTGAATGAAGGAAT  1096

seq1  TATTATA-GAAAGGTTTTCAGTATCTGAAACGT  1130
      || |||| |||||||||||||||||||||||||
seq2  TA-TATATGAAAGGTTTTCAGTATCTGAAACGT  1128