BAC Information

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BAC

Clone NameB6Ng01-119G19
Chromosome13 (Build37)
Map Location 66,723,031 - 66,823,241
singlet/doubletdoublet
Overlap geneMzf6d, Vmn2r-ps106, LOC666027
Upstream geneLOC628722, LOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746, LOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik
Downstream geneLOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119G19.bB6Ng01-119G19.g
ACCDH923640DH923641
length1,1901,082
definitionDH923640|Mus musculus domesticus DNA, BAC clone: B6Ng01-119G19, 5' end.DH923641|Mus musculus domesticus DNA, BAC clone: B6Ng01-119G19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,723,031 - 66,724,072)(66,822,110 - 66,823,241)
sequence
gaattctctgatgatttctaagactgcatttgttactaaagcatttgtca
cattccctacatttattaggattctctcctgtatgaattctctgatgaat
tataagatcatatttgtgagtgaagcatttgtcacattcactacattgat
aagggttttcccctgtatgaattctctgatgaacattaagattatatttt
tgggtaaagcatttctcacattcactacatttgtaaggtttttctcctgt
ataaactctgatgaatagttttgggtaaagctttttgtcacattcactac
atttgtaaggtttctttcctgtatgaattatttgatgactactaacatta
catttttgggtaaagcatttgttacattcactacatttgtaaggcttctt
tcctgtatgaattatctgatgacttctaggactgtgtttgtcagtacagc
atttgtcacactcactacatttataaggtttctctccagtatgaattctc
tgatgaatactaagactgtatttgtgcaaaaagcatttgtcacattcact
atatatgtaaggtttctctcctgtatggattctctgatgtctaagcttgc
atttcttggtgaaacatctggcacgttcactacatctgtaaggtttcttt
ccactattggtttgtttcagcctgagtatttgcttagagttaaaaacctt
atcaagcactataccattgtgttctttctttcctatgtggattccttgat
gtagaccagtgatagaacacaaatttaaacagtttatacagtttttatgt
ttgcaaggtcctctggtgtttccattttcatgtctgtttatgtttgatga
ctcaacacgtgtattcctgaagttagcttggtaaaatacactttgggtgt
attcataaatgattttgccatgctttgacctttgtaagacttctcctgga
tattcacatgctgggatgtgctggaacttttagtcattatgcattcattt
gtctttaagaggctttactggatatgaatatcttttaaatcttcttcatg
ttttatgtccatataaattcaaatattgtatttatcatattgaagaatag
aattttgttatttcttatataaggtgaggacatgttccactattgataaa
catctcctgctaggtgggtactctttaaagtatttcaggc
gaattcacctttaaaaaataggacccagggctggagagatggctcagtgg
ttaagagacccgactgctctcccgaagattctgagttcaagtcccagcaa
ccacatggtggctcaaaaccatacatagtgagatctgacgacctcatctg
gtgtgtctgaagacagctacagtgaacttacatatagcaataaataaatc
ttaaaaaaaaaaaaaggacccaggagggatggggtgaagaacttggggag
ggaaccagaaaggggggcaacatttggaatgtaaataaataaataattta
cttaaaataaaagaaaattaggatccagtgaaagccaggcatggtggcac
aaacctctaattccattgcttgggagataggggcaagcagatctctgtga
gtttgaagcccagcttggttacatagtatgttccacagctgcatatggag
gccctgtctccaaccaaaccagccaaccaaccaaccaaccatacaggata
tgtggccaatgagatagctctgggagtagagtactgtcagacctgaggaa
aaaaacattctcataactttctgcttaaatgcaagctgtgcccaaggaac
tgaccagacaactgattgcctcctgctaagttggagtttcaaagaacagc
cccttactggcttttgaggtcccctttatgggggtgggttagggttgata
gaaaacagctgttgagatagttggctgttagcacctgaacagaagaatag
gggactcaggcctcaagctgcctaagtcttagataagtgcaggaatactt
catatggaatgggggtcaccacagggttcaggagttagcaggcaaggggt
gggtacacatcatcagtgactaaattcagtataggttgaaaaacattgct
tgcaagatacattaggtttaggaaaaataaagtacagaaactctctctaa
ctctacacaccgcagacccccacccgagacaataaattgattttcaatta
ataaaaaccgtgatctagatagcccttattcggtaagtccttgcctcctc
ccaatatttctttctctctccttgtttagcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_66723031_66724072
seq2: B6Ng01-119G19.b_198_1235

seq1  GGGTTTTCCCCTGTATGAATTCTCTGATGAACATTAAGATTATATTTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTTCCCCTGTATGAATTCTCTGATGAACATTAAGATTATATTTTTG  50

seq1  GGTAAAGCATTTGTCACATTCACTACATTTGTAAGGTTTTTCTCCTGTAT  100
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGTAAAGCATTTCTCACATTCACTACATTTGTAAGGTTTTTCTCCTGTAT  100

seq1  AAACTCTGATGAATACTTTTGGGTAAAGCTTTTTTTCACATTCACTACAT  150
      ||||||||||||||| |||||||||||||||||| |||||||||||||||
seq2  AAACTCTGATGAATAGTTTTGGGTAAAGCTTTTTGTCACATTCACTACAT  150

seq1  TTGTAAGGTTTCTTTCCTGTATGAATTATTTGATGACTACTAACATTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAGGTTTCTTTCCTGTATGAATTATTTGATGACTACTAACATTACA  200

seq1  TTTTTGGGTAAAGCATTTGTTACATTCACTACATTTGTAAGGCTTCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGGTAAAGCATTTGTTACATTCACTACATTTGTAAGGCTTCTTTC  250

seq1  CTGTATGAATTATCTGATGACTTCTAGGACTGTGTTTGTCAGTACAGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGAATTATCTGATGACTTCTAGGACTGTGTTTGTCAGTACAGCAT  300

seq1  TTGTCACACTCACTACATTTATAAGGTTTCTCTCCAGTATGAATTCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACACTCACTACATTTATAAGGTTTCTCTCCAGTATGAATTCTCTG  350

seq1  ATGAATACTAAGACTGTATTTGTGCAAAAAGCATTTGTCACATTCACTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATACTAAGACTGTATTTGTGCAAAAAGCATTTGTCACATTCACTAT  400

seq1  ATATGTAAGGTTTCTCTCCTGTATGGATTCTCTGATGTCTAAGCTTGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAAGGTTTCTCTCCTGTATGGATTCTCTGATGTCTAAGCTTGCAT  450

seq1  TTCTTGGTGAAACATCTGGCACGTTCACTACATCTGTAAGGTTTCTTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGTGAAACATCTGGCACGTTCACTACATCTGTAAGGTTTCTTTCC  500

seq1  ACTATTGGTTTGTTTCAGCCTGAGTATTTGCTTAGAGTTAAAAACCTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTGGTTTGTTTCAGCCTGAGTATTTGCTTAGAGTTAAAAACCTTAT  550

seq1  CAAGCACTATACCATTGTGTTCTTTCTTTCCTATGTGGATTCCTTGATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCACTATACCATTGTGTTCTTTCTTTCCTATGTGGATTCCTTGATGT  600

seq1  AGACCAGTGATAGAACACAAATTTAAACAGTTTATACAGTTTTTATGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGTGATAGAACACAAATTTAAACAGTTTATACAGTTTTTATGTTT  650

seq1  GCAAGGTCCTCTGGTGTTTCCATTTTCATGTCTGTTTATGTTTGATGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGTCCTCTGGTGTTTCCATTTTCATGTCTGTTTATGTTTGATGACT  700

seq1  CAACACGTGTATTCCTGAAGTTAGCTTGGTAAAATACACTTTGGGTGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACGTGTATTCCTGAAGTTAGCTTGGTAAAATACACTTTGGGTGTAT  750

seq1  TCATAAATGATTTTGCCATGCTTTGACCTTTGTAAGACTTCTCCTGGATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAATGATTTTGCCATGCTTTGACCTTTGTAAGACTTCTCCTGGATA  800

seq1  TTCACATGCTGGGATGTGCTGGAACTTTTAGTCATTATGCATTCATTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATGCTGGGATGTGCTGGAACTTTTAGTCATTATGCATTCATTTGT  850

seq1  CTTTAAAGAGGCTTTACTGGATATGAATATCTTTTAAATCATCTTCATG-  899
      |||| ||||||||||||||||||||||||||||||||||| |||||||| 
seq2  CTTT-AAGAGGCTTTACTGGATATGAATATCTTTTAAATCTTCTTCATGT  899

seq1  TTTATGTCCATATGAAAATTCAAATA-TGTATTTATCATATTTAAAAGAA  948
      |||||||||||||  ||||||||||| |||||||||||||||   |||||
seq2  TTTATGTCCATAT--AAATTCAAATATTGTATTTATCATATT--GAAGAA  945

seq1  TAGA--TATGTTA-TTCTTATATAA-GTGAGGACAATGTCCACTA-TGAA  993
      ||||  | ||||| ||||||||||| |||||||||   ||||||| ||| 
seq2  TAGAATTTTGTTATTTCTTATATAAGGTGAGGACATGTTCCACTATTGAT  995

seq1  TAACATCTCCTGGTCTAGTTGTGGTAAACTCTTTAAAAGTAATTCAGGC  1042
       |||||||||||  |||| || |||  ||||||| |||||| |||||||
seq2  AAACATCTCCTG--CTAGGTG-GGT--ACTCTTT-AAAGTATTTCAGGC  1038

seq1: chr13_66822110_66823241
seq2: B6Ng01-119G19.g_68_1149 (reverse)

seq1  CTGCTAAACAAGAGAGA-AGAAAGAAAAAGATGGGGAGGGAGACAAGGAC  49
      |||||||||||| |||| ||||||  ||| || |||| |||| |||||||
seq2  CTGCTAAACAAG-GAGAGAGAAAG--AAATATTGGGA-GGAGGCAAGGAC  46

seq1  TAACTG-ATAAAGGCTAACTAGATCACGTTTTTAATATATTTGAAAATCA  98
      | || | |||| ||||| |||||||||| |||| || || ||||||||||
seq2  TTACCGAATAAGGGCTATCTAGATCACGGTTTTTAT-TAATTGAAAATCA  95

seq1  CATTTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  148
       ||||||                   ||| |  | ||| | || || | |
seq2  -ATTTAT-------------------TGTCT-CGGGTGGGGGTCTGCG-G  123

seq1  TGTGTAGAGTGAGAGAGAGAGAGAGAGAGTCAGTTTCTGTACTTTCTGTT  198
      |||||||||| ||||||              |||||||||||||| | ||
seq2  TGTGTAGAGTTAGAGAG--------------AGTTTCTGTACTTTATTTT  159

seq1  TCCTAAACCTAATGTATCCTGCAAGCAATGTTTTTCAACCTGTACTGAAT  248
      |||||||||||||||||| |||||||||||||||||||||| ||||||||
seq2  TCCTAAACCTAATGTATCTTGCAAGCAATGTTTTTCAACCTATACTGAAT  209

seq1  TT-GTCACCTCATGATGTGTACCCACCCCTTTGCCTTGCTAAACTCCTGA  297
      || |||| || |||||||||||||||||| ||||| |||| |||||||||
seq2  TTAGTCA-CTGATGATGTGTACCCACCCC-TTGCC-TGCT-AACTCCTGA  255

seq1  ACCCTGTGGTGACCCCCCTTCCATATGATGTATTCCTGCACTTATCTACC  347
      ||||||||||||||||| |||||||||| |||||||||||||||||||  
seq2  ACCCTGTGGTGACCCCCATTCCATATGAAGTATTCCTGCACTTATCTAAG  305

seq1  ACTTAGGCAGCCTTGAGGCCCAAGTCCCCTA---TTCTGTTCAGGTGCTA  394
      |||||||||| |||||||||  |||||||||   ||||||||||||||||
seq2  ACTTAGGCAG-CTTGAGGCCTGAGTCCCCTATTCTTCTGTTCAGGTGCTA  354

seq1  ACAGCCAACTATCTCAACAGCTGTTTTCTATCAACCCTAACCCATCCCCA  444
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACAGCCAACTATCTCAACAGCTGTTTTCTATCAACCCTAACCCACCCCCA  404

seq1  TAAAGGGGACCTCAAAAGCCAGTAAGGGGCTGTTCTTTGAAACTCCAACT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGGGACCTCAAAAGCCAGTAAGGGGCTGTTCTTTGAAACTCCAACT  454

seq1  TAGCAGGAGGCAATCAGTTGTCTGGTCAGTTCCTTGGGCACAGCTTGC-T  543
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TAGCAGGAGGCAATCAGTTGTCTGGTCAGTTCCTTGGGCACAGCTTGCAT  504

seq1  TTAAGCAGAAAGTTATGAGAATGTTTTTTTTCCCCCTCAGGTCTGACAGT  593
      ||||||||||||||||||||||||||||||    ||||||||||||||||
seq2  TTAAGCAGAAAGTTATGAGAATGTTTTTTT----CCTCAGGTCTGACAGT  550

seq1  ACTATACTCCCAGAGCTATCTCATTGGCCACATATCCTGTATGGTTGGTT  643
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTACTCCCAGAGCTATCTCATTGGCCACATATCCTGTATGGTTGGTT  600

seq1  GGTTGGTTGGCTGGTTTGGTTGGAGACAGGGCCTCCATATGCAGCTGTGG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGTTGGCTGGTTTGGTTGGAGACAGGGCCTCCATATGCAGCTGTGG  650

seq1  AACATACTATGTAAACCAAGCTGGGCTTCAAACTCACAGAGATCTGCTTG  743
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AACATACTATGT-AACCAAGCTGGGCTTCAAACTCACAGAGATCTGCTTG  699

seq1  CCCCTGTCTCCCAAGCAATGGAATTAGAGGTTTGTGCCACCATGCCTGGC  793
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTATCTCCCAAGCAATGGAATTAGAGGTTTGTGCCACCATGCCTGGC  749

seq1  TTTCACTGGATCCTAATATTCTTTTATTTTAAGTAAATTATTTATTTATT  843
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTTCACTGGATCCTAATTTTCTTTTATTTTAAGTAAATTATTTATTTATT  799

seq1  TACATTCCAAATGTTGCCCCCCTCTCTGGTTCCCCTCCCCAAGTTCTTCA  893
      ||||||||||||||||||||||| ||||||| ||||||||||||||||||
seq2  TACATTCCAAATGTTGCCCCCCTTTCTGGTT-CCCTCCCCAAGTTCTTCA  848

seq1  ACCCATCCCTCCTGGGTCCTTTTTTTCTTTTTTTTTTAAGATTTATTTAT  943
       |||||||||||||||||||||     |||||||||||||||||||||||
seq2  CCCCATCCCTCCTGGGTCCTTT-----TTTTTTTTTTAAGATTTATTTAT  893

seq1  TGCTATATGTAAGTTCACTGTAGCTGTCTTCAGACACACCAGAAGAGGTC  993
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGCTATATGTAAGTTCACTGTAGCTGTCTTCAGACACACCAGATGAGGTC  943

seq1  GTAGGATCTCATTATGTATGGTTTTGAGCCACCATGTGGTTGCTGGGACT  1043
      ||  ||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTCAGATCTCACTATGTATGGTTTTGAGCCACCATGTGGTTGCTGGGACT  993

seq1  TGAACTCAGAATCTTCGGGAGAGCAGTCGGGTCTCTTCACCGCTGAGCCA  1093
      ||||||||||||||||||||||||||||||||||||| ||| ||||||||
seq2  TGAACTCAGAATCTTCGGGAGAGCAGTCGGGTCTCTTAACCACTGAGCCA  1043

seq1  TCTCTCCAGCCCTGGGTCCTATTTTTTAAAGGTGAATTC  1132
      |||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCAGCCCTGGGTCCTATTTTTTAAAGGTGAATTC  1082