BAC Information

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BAC

Clone NameB6Ng01-120A24
Chromosome13 (Build37)
Map Location 39,495,577 - 39,496,716
singlet/doubletsinglet
Overlap genenone
Upstream geneBmp6, Txndc5, Muted, Eef1e1, LOC621102, Slc35b3, EG666867
Downstream geneLOC100041779, LOC382747, A230103O09Rik, Ofcc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120A24.bB6Ng01-120A24.g
ACCDH924107DH924108
length1,127838
definitionDH924107|Mus musculus domesticus DNA, BAC clone: B6Ng01-120A24, 5' end.DH924108|Mus musculus domesticus DNA, BAC clone: B6Ng01-120A24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgttgacataagtcaccatgtatcacaatgaaaaatgtgacaaa
atttaaaaacacgtgtgcaaagagaactttactattcaagtgtaagtagg
aatatttataaaggtgcatatacacaaaaatctctacatctctctctctc
catatatatatatatatatatatatatacatacacattattatatcatat
acatatacacatatatagacacacacagacatgtacatgatgtatatata
tatatatattttttttttgagaggtatttctgataaagaaagtcagttaa
ctcttgtgattcagatttccagcaagatcatcttaactcccaactttggg
caggaaaaaaaagtggttggaacagaagccaggcaggttttcaggttttc
tggttagtgcgtttaaacaaatataacctctgacccagctaccaggtaca
tgaagataaaataactgtgcaaatgcgcatcactcatttgaatacacaga
ttctaaacatctggtttaagacagttctgtacatcttgaggactccaaat
tactgaaaccacagaacattggatgaggaggagtccagacttcagtaggg
ggtggaataagtggagaattattctatttcagtatgcaccgcatgtttat
acttaaaacatgaatatcaggctggggacatgcctcacacactgtttata
aatgagttcacaatgagatcattaacgttggtaacaaaataatttctact
aagtataacatgtgtggtaacttaaagtattttcatgacttcacatttat
ttcaagccatttagaatcaaacccttttaacatatctaaagaatgggata
gaaaataagaatgtaacaatctagttccatgctgtaaaacgaataattag
atggttgtagacagccttgtcaattttatttaccatgtacatatgtatat
acatgcatgccattaccagtggccaacacagaatatttgaacgcatacct
acacacaactcagattctaaaactcacaaatcaaacattttgaatgcgct
ttatttgggtaggtgctgatgcttcggttgatgagaagagagaaacaaga
gctttgagaattcgaaaagagcactaa

gaattctgtgtcatcaagaaaatatctcgctgtaaaaatgaggaacaagg
aatgctatttgtttgtggagctgagaaatatctccctattatagtacata
gcattctgacaaagacacattatgatgccacatgttttgttttccaaagg
aactttgtaggacaaatattcattattcaaagtgaaaatgaagaaaaatg
caatgcagaaaagcactgttcatattatcacatacactcagggaattctg
attaacatccattattctttcaaagaccttatgaagttatatatttgggt
taacaaaattcaataaacgttgaaacttaaaacttagatatatgtatgta
tgtgtatatatatatatatatatatatatatatatatatatatatatata
tatatatatagagagagttatattgtttgtgcgcgcatatatatatatat
atatacacagagagagagagagatgtatgtatgtatatacagagtgtgtg
tgtgtgtgtgtgtgtgggggtgtggcgggggatatatcttttttcacaca
ctctctcatacatatatgtgtgtaaaagagagtgtgtgacagaaaacaaa
gagagtgtgtatagagtgtgtgtgtgtgtgtgtgagagtgtgtgagagag
agagagatatatataactacacacaaatagacacaccccctttctctctc
agagagagatagatatatacacagacagacagagatacatacatacagag
acacacatatatatagatagacaggcggggcgggcgcgcgccccgccatc
ctgctgggtatagtaacatatatatatacagagatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_39495577_39496716
seq2: B6Ng01-120A24.b_49_1174 (reverse)

seq1  TTAGTGGCTCTTTTTCGAATTTCTTCAAAAGCTCTTGTTTCTCTTCTTCT  50
      ||||| |||| |||||||| ||||   |||||||||||||||| ||||||
seq2  TTAGT-GCTC-TTTTCGAA-TTCT--CAAAGCTCTTGTTTCTC-TCTTCT  44

seq1  CAATCAACGGAAAGCATCAGCACCCTACCAAATTAAAAGGCGCATTCAAA  100
      | |||||| | ||||||||||| |||||| || ||||  |||||||||||
seq2  C-ATCAACCG-AAGCATCAGCA-CCTACCCAAATAAA--GCGCATTCAAA  89

seq1  ATGTTTTGAATTTGTGAGTTTTAGAATCTGAGTTGTGTGTAGGTATGCGT  150
      ||||||   |||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTT--GATTTGTGAGTTTTAGAATCTGAGTTGTGTGTAGGTATGCGT  137

seq1  TCAAATATTCTGTGTTGGCCACTTGGTAATGGCATGCATGTATATACATA  200
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCAAATATTCTGTGTTGGCCAC-TGGTAATGGCATGCATGTATATACATA  186

seq1  TGTACATGGTAAATAAAATTGACAAGGCTGTCTACAACCATCTAATTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATGGTAAATAAAATTGACAAGGCTGTCTACAACCATCTAATTATT  236

seq1  CGTTTTACAGCATGGAACTAGATTGTTACATTCTTATTTTCTATCCCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTTACAGCATGGAACTAGATTGTTACATTCTTATTTTCTATCCCATT  286

seq1  CTTTAGATATGTTAAAAGGGTTTGATTCTAAATGGCTTGAAATAAATGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGATATGTTAAAAGGGTTTGATTCTAAATGGCTTGAAATAAATGTG  336

seq1  AAGTCATGAAAATACTTTAAGTTACCACACATGTTATACTTAGTAGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCATGAAAATACTTTAAGTTACCACACATGTTATACTTAGTAGAAAT  386

seq1  TATTTTGTTACCAACGTTAATGATCTCATTGTGAACTCATTTATAAACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGTTACCAACGTTAATGATCTCATTGTGAACTCATTTATAAACAG  436

seq1  TGTGTGAGGCATGTCCCCAGCCTGATATTCATGTTTTAAGTATAAACATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGAGGCATGTCCCCAGCCTGATATTCATGTTTTAAGTATAAACATG  486

seq1  CGGTGCATACTGAAATAGAATAATTCTCCACTTATTCCACCCCCTACTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGCATACTGAAATAGAATAATTCTCCACTTATTCCACCCCCTACTGA  536

seq1  AGTCTGGACTCCTCCTCATCCAATGTTCTGTGGTTTCAGTAATTTGGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGGACTCCTCCTCATCCAATGTTCTGTGGTTTCAGTAATTTGGAGT  586

seq1  CCTCAAGATGTACAGAACTGTCTTAAACCAGATGTTTAGAATCTGTGTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAGATGTACAGAACTGTCTTAAACCAGATGTTTAGAATCTGTGTAT  636

seq1  TCAAATGAGTGATGCGCATTTGCACAGTTATTTTATCTTCATGTACCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGAGTGATGCGCATTTGCACAGTTATTTTATCTTCATGTACCTGG  686

seq1  TAGCTGGGTCAGAGGTTATATTTGTTTAAACGCACTAACCAGAAAACCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGGGTCAGAGGTTATATTTGTTTAAACGCACTAACCAGAAAACCTG  736

seq1  AAAACCTGCCTGGCTTCTGTTCCAACCACTTTTTTTTCCTGCCCAAAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTGCCTGGCTTCTGTTCCAACCACTTTTTTTTCCTGCCCAAAGTT  786

seq1  GGGAGTTAAGATGATCTTGCTGGAAATCTGAATCACAAGAGTTAACTGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTTAAGATGATCTTGCTGGAAATCTGAATCACAAGAGTTAACTGAC  836

seq1  TTTCTTTATCAGAAATACCTCTCAAAAAAAAAATATATATATATATATAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTATCAGAAATACCTCTCAAAAAAAAAATATATATATATATATAC  886

seq1  ATCATGTACATGTCTGTGTGTGTCTATATATGTGTATATGTATATGATAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTACATGTCTGTGTGTGTCTATATATGTGTATATGTATATGATAT  936

seq1  AATAATGTGTATGTATATATATATATATATATATATATATGGAGAGAGAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGTGTATGTATATATATATATATATATATATATATGGAGAGAGAG  986

seq1  AGATGTAGAGATTTTTGTGTATATGCACCTTTATAAATATTCCTACTTAC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTAGAGATTTTTGTGTATATGCACCTTTATAAATATTCCTACTTAC  1036

seq1  ACTTGAATAGTAAAGTTCTCTTTGCACACGTGTTTTTAAATTTTGTCACA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAATAGTAAAGTTCTCTTTGCACACGTGTTTTTAAATTTTGTCACA  1086

seq1  TTTTTCATTGTGATACATGGTGACTTATGTCAACAGAATT  1140
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATTGTGATACATGGTGACTTATGTCAACAGAATT  1126


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