BAC Information

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BAC

Clone NameB6Ng01-120F12
Chromosome13 (Build37)
Map Location 26,558,241 - 26,559,327
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC214973, LOC666221
Downstream geneLOC100042180, LOC100042191, Hdgfl1, LOC100040939, LOC100040945, LOC100040957, Prl, Prl3d1, Prl3d2, Prl3d3, Prl3c1, Prl3b1, Prl3a1, Prl6a1, Prl8a2, Prl2b1, Prl8a6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120F12.bB6Ng01-120F12.g
ACCDH924311DH924312
length1,0871,201
definitionDH924311|Mus musculus domesticus DNA, BAC clone: B6Ng01-120F12, 5' end.DH924312|Mus musculus domesticus DNA, BAC clone: B6Ng01-120F12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttgacagtggcagcttgttacttccatggccactttattctct
gagatattcaaagcttatttcttcccctagttatggcgcaactcaaatgc
taccttttcttaccatttccaccagctgtctatcttggcatgcctacatg
ttttcctggcaacattacactttaaaatcatgttatggatggattggccc
aattcctggctgtccactttcttgtaggagaatgtaaggtctcatggcat
gaagactttgcaagtgtttcaccatcaagaacactgcaacatagaacata
tatatctaatacatatatgcttgaatgtataaatgaaggtacacacacaa
actctctctctctctctctctctctctctctctttctcacacacacacac
acacacacacacacatacacacacacacacacacatacacagatacccta
ctatacatgtatggtgagttcattcttgaaggaaagaaaataaagtttat
aggtatatggggtgcttctgctgcttctgaccactaaaaacatctttacc
tgaagacatactctttccaaaatactcaaatgaagtgcctgctttgcagt
gccatggcctcatgtgatttgcatgtatctgaaggtttttaggaatcttt
gcagctagttcaggctactatctgagcaggaagttgaaataccaccattc
tgcagctatcaggattgcaattctttcatggaaaatatcttaccttttga
atggccaagaagagtaaaaatagtcattttgggcatgttcagtctttagt
gaacatatgtggcatttgagaattttaaattctgtttgtccagggtgtgc
ttgtgtgctgaagtgcatgtgtacatgtgcgtgtgtgtgtgtgtgtgtct
gtgtgtgtgtgaataaaaggtgcattttaacacatttcaaatggatggga
tgtagctcagctgctagagcttacatagtttgtcccaagcactttattaa
agcccatatactgcattaaaaccagtcatcatgggcactgtgcatgccta
tatttcactgccctcttgtaggggtaggaagaagatc
gaattctcacttgaggaataccgaatggctgagaaacacctgaaaaaaat
gttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccatctcacaccagtaagaatggctaaaatcaaaaattcaggggacag
cagatgctggcaaggatgtggagaaagaggaacactcctccactgttggt
gggattgcaagcttatacaaccactctggaaatcagtttggcggtttctc
acaaaattggacatggtactaccagaggatcccccaatacctctcctggg
catatatccagaagatgtcccaactggtaagaaggacacatactccacta
tgttcatggcagtcttatttataatagctagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacaaaaaaatgtggtacatttacacaa
cggagtactactaagctcttaaaaataatgaatttattacattcctaggc
aaatgtgtgggactgaagggcaatatcctgagtgaggtaacccaatcaca
taatcactcgaatgagttgtactcactgatcagtgaatattagcgccgaa
acttacagtacccaagatataagttacaattgactaaacacatgaaactc
agcatgaacgaagaccgtattgtagacactttgcccctaattaaaatgtg
aacaaaacactcatggaaagaggtacagagacatagtttcgatctgagac
actcgatagaccatggcgtagactgccatatccagggatccattccataa
tcagcctccgaacgttgactccattgtatactctaacaaaattgtgctga
taggatcgtgatatagctgtctctagtgagactacgctggggccaaccaa
atacattattgcggaagcccaagtcatctagtgggaaggatcgagggccc
ccaatcgagtagctacgaaaattccccaagcagctaaggcgatctgcatc
cttcagatgtgacaacatatgaactagccagtaccccggcaccttataac
ctctaactgcatagtttcaaaagaaggccctacttggcacactacctgaa
agaaaagcccattggccctgtcaagttctgaatgactcgaatactgtgca
caccaggcctaacaaattgaccattgccggtttatgacgagaaatgctta
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_26558241_26559327
seq2: B6Ng01-120F12.b_47_1133

seq1  GAATTCCTTGACAGTGGCAGCTTGTTACTTCCATGGCCACTTTATTCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGACAGTGGCAGCTTGTTACTTCCATGGCCACTTTATTCTCT  50

seq1  GAGATATTCAAAGCTTATTTCTTCCCCTAGTTATGGCGCAACTCAAATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATATTCAAAGCTTATTTCTTCCCCTAGTTATGGCGCAACTCAAATGC  100

seq1  TACCTTTTCTTACCATTTCCACCAGCTGTCTATCTTGGCATGCCTACATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTTCTTACCATTTCCACCAGCTGTCTATCTTGGCATGCCTACATG  150

seq1  TTTTCCTGGCAACATTACACTTTAAAATCATGTTATGGATGGATTGGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTGGCAACATTACACTTTAAAATCATGTTATGGATGGATTGGCCC  200

seq1  AATTCCTGGCTGTCCACTTTCTTGTAGGAGAATGTAAGGTCTCATGGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTGGCTGTCCACTTTCTTGTAGGAGAATGTAAGGTCTCATGGCAT  250

seq1  GAAGACTTTGCAAGTGTTTCACCATCAAGAACACTGCAACATAGAACATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACTTTGCAAGTGTTTCACCATCAAGAACACTGCAACATAGAACATA  300

seq1  TATATCTAATACATATATGCTTGAATGTATAAATGAAGGTACACACACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTAATACATATATGCTTGAATGTATAAATGAAGGTACACACACAA  350

seq1  ACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCACACACACACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCACACACACACAC  400

seq1  ACACACACACACACATACACACACACACACACACATACACAGATACCCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACATACACACACACACACACACATACACAGATACCCTA  450

seq1  CTATACATGTATGGTGAGTTCATTCTTGAAGGAAAGAAAATAAAGTTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACATGTATGGTGAGTTCATTCTTGAAGGAAAGAAAATAAAGTTTAT  500

seq1  AGGTATATGGGGTGCTTCTGCTGCTTCTGACCACTAAAAACATCTTTACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATATGGGGTGCTTCTGCTGCTTCTGACCACTAAAAACATCTTTACC  550

seq1  TGAAGACATACTCTTTCCAAAATACTCAAATGAAGTGCCTGCTTTGCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACATACTCTTTCCAAAATACTCAAATGAAGTGCCTGCTTTGCAGT  600

seq1  GCCATGGCCTCATGTGATTTGCATGTATCTGAAGGTTTTTAGGAATCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGGCCTCATGTGATTTGCATGTATCTGAAGGTTTTTAGGAATCTTT  650

seq1  GCAGCTAGTTCAGGCTACTATCTGAGCAGGAAGTTGAAATACCACCATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTAGTTCAGGCTACTATCTGAGCAGGAAGTTGAAATACCACCATTC  700

seq1  TGCAGCTATCAGGATTGCAATTCTTTCATGGAAAATATCTTACCTTTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTATCAGGATTGCAATTCTTTCATGGAAAATATCTTACCTTTTGA  750

seq1  ATGGCCAAGAAGAGTAAAAATAGTCATTTTGGGCATGTTCAGTCTTTAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCAAGAAGAGTAAAAATAGTCATTTTGGGCATGTTCAGTCTTTAGT  800

seq1  GAACATATGTGGCATTTGAGAATTTTAAATTCTGTTTGTCCAGGGTGTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATATGTGGCATTTGAGAATTTTAAATTCTGTTTGTCCAGGGTGTGC  850

seq1  TTGTGTGCTGAAGTGCATGTGTACATGTGCGTGTGTGTGTGTGTGTGTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGCTGAAGTGCATGTGTACATGTGCGTGTGTGTGTGTGTGTGTCT  900

seq1  GTGTGTGTGTGAATTAAAAGTTGCATTTTAACACATTTCAAATGGATGGG  950
      ||||||||||||| |||||| |||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGAA-TAAAAGGTGCATTTTAACACATTTCAAATGGATGGG  949

seq1  ATGTAGCTCAGCTGCTAGAGCTTACATAGTATGTCCAAAGCACTGTATTA  1000
      |||||||||||||||||||||||||||||| ||||| ||||||| |||||
seq2  ATGTAGCTCAGCTGCTAGAGCTTACATAGTTTGTCCCAAGCACTTTATTA  999

seq1  AAGCCCATATACTGCATTAAAACCAGTCATCATGGTCACTGTGCATGCCT  1050
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAGCCCATATACTGCATTAAAACCAGTCATCATGGGCACTGTGCATGCCT  1049

seq1  ATA-TTCACTGCACTCTTGAAGGTG-AGGAAGAAAGATC  1087
      ||| |||||||| |||||| ||| | |||||| ||||||
seq2  ATATTTCACTGCCCTCTTGTAGGGGTAGGAAG-AAGATC  1087