BAC Information

Click to search

BAC

Clone NameB6Ng01-121O23
Chromosome13 (Build37)
Map Location 66,009,578 - 66,009,779
singlet/doubletsinglet
Overlap genenone
Upstream geneEG432767, 4930458L03Rik, LOC218301, LOC628515, 4932441B19Rik, Gm274, Hiatl1, LOC100042311, Olfr465-ps1, Olfr466, Nlrp4f, ENSMUSG00000074847, Zfp369, LOC100042347, LOC100042341, LOC665738, EG665742, LOC665750, LOC665753, EG544944, EG665767, LOC665777, EG628648, LOC665809, LOC100042404, LOC628722, LOC665851, Vmn2r-ps99, LOC628794
Downstream geneEG665897, LOC100041855, EG628746, LOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121O23.bB6Ng01-121O23.g
ACCDH925491DH925492
length1,224944
definitionDH925491|Mus musculus domesticus DNA, BAC clone: B6Ng01-121O23, 5' end.DH925492|Mus musculus domesticus DNA, BAC clone: B6Ng01-121O23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatacaggagagaaaccttacaaatgtaatgaatgtgacaaatgc
tttactgacaaaggcagtctgagagttcatcagagaattcatacaggaga
gaaaccttacaaatgcagtgagtgtgacaaatgctttacccgaccatccc
atcttagtattcatcgtagaattcattcaggagagaaaccttacaaatgt
agtgaatgcgacaaatgctttactgacaaaggcagtctgagaaagcatca
gagaattcatacaggagagaaaccttacaaatgtagtgaatgcgacaaat
gctttactgacaaattcactctgagaaagcatcagagaattcatacagga
gagaaaccttacaaatgtaatgaatgtgacaaatgctttactgacaaagg
cagtctgagagttcatcagagaattcatacaggagagaaaccttacaaat
gcagtgagtgtgacaaatgctttacccaaccatcccatcttagtattcat
cgtagaattcattcaggagagaaaccttacaaatgtagtgagtgtgacaa
atgctttacccaaccatcccatcttagtattcatcgtagaattcattcag
gagagaaaccttacaaatgtagtgaatgcgacaaatggtttactgacaaa
ggctatctgagagttcatcatagaattcatacaggagagaaaccgtacca
atgcagtgagtgtgacaaatgctttactgacaaaagcagtcttagagttc
atcatagaattcatgcaggagagaaaccttacaaatgtagtgaatgcgac
aaatgctttactgacaaattcactctgagaaagcatcagagaattcatac
aggagagaaacctttacaaatgtaatgaatgtgacaaatgctttactgac
aaaggcagtctgagagttcatcagagaattcatacaggagagaaacctta
caaatgcagtgagtgtgacaaatgctttacccaaccatcccatcttagta
ttcatcgtagaattcattcaggagagaaaccttacaaatgtagtgaatgc
gacaaatgcttactgacaaagcagtctgagagtcatcaagattcataagg
agagaacgtatcaatgcagtggaggtggggacaatgctttacttgaccaa
agccagtcttaggtcatcatgaatcaatgccaggagaaaacctttacaat
gttatgtgagaaatggtcgcgacc
gaattctcagactgcttttttcagtaaagcatttgccacattcattgcat
ttgtaaggtttctctcctgtatgaattctctgatgaattctcagactgct
ttttttcagtaaagcatttgccacattcactgcatttgtaaggtttctct
cctgtatgaattctctgatgaattctcagactgcttttttcagtaaagca
tttgccacattcagtgcatttgtaaggtttctctcctgtatgaattctct
gatgaatactaagattggattgttgggtaaagcatttgtcacattcactg
catttgtaaggtttctctcctgtatgaattctctgatgaatactaagatg
ggattgttgggtaaagcatttgtcacattcactgcatttgtaaggtttct
ctcctgtatgaattctctgatgaattctcagactgcttttttcagtaaag
catttgccacattcactgcatttgtaaggtttctctcctgtatgaattct
ctgatgaatactaagataggattcttgggtaaagcatttgtcacattcac
tgcatttgtaaggtttctctcctgtatgaattctctgatgaatactaaga
ttggattgtttggtaaagcatttgtcacattcactgcatttgtaaggttt
ctctcctgtatgaattctctgatgaattctcagattgccttttccagtaa
agcatttgtcacattcgctacatttgtaaggtttctctcctgtatgaatt
ctctgatgaattctgagactgcctttttcggtaaagcatttgtcgcattc
actgcatttgtaagatttctctcctgcatgaattttctgatgaaaattaa
gatgggatttttgggaaaagcatttgtcccattcagtacatttgtgagtg
tataatggaggattctagaatcacattgctaagcttgttccatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_66009578_66009779
seq2: B6Ng01-121O23.g_102_304 (reverse)

seq1  CAGGAGAGAAACCTTATGAATGTAATTGATATGAGAAAACATTTACATAT  50
      ||||||||||||||||  |||| | |  || ||  |||   |||||  | 
seq2  CAGGAGAGAAACCTTACAAATGCACTGAATGTGGCAAATGCTTTACTGAA  50

seq1  CACAGTCATTTCCAAGTACATAAATGAGCACATAGTTGAGAGAAGCCCTG  100
       | ||   | |   | | ||| |  ||   ||||   ||||||| || | 
seq2  AAAAGCAGTCTGAGAATTCATCAGAGAATTCATACAGGAGAGAAACCTTA  100

seq1  TGATCGTAATAAAAGTGTTAAAGCCTTTGC-GTGTCACTGTACTCTCCAA  149
        |  | | | || |||  |||  |||| | |    |  | | |||   |
seq2  CAAATGCAGTGAATGTGGCAAATGCTTTACTGAAAAAAAGCAGTCTGAGA  150

seq1  ATACTTAAAGGAACACACGTTTTAGAGAAACCTTACAAATGCAATGAATG  199
      || | | |  |||  ||      |||||||||||||||||||||||||||
seq2  ATTCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGCAATGAATG  200

seq1  TGG  202
      |||
seq2  TGG  203