BAC Information

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BAC

Clone NameB6Ng01-122F16
Chromosome13 (Build37)
Map Location 33,478,061 - 33,479,243
singlet/doubletsinglet
Overlap genenone
Upstream geneWrnip1, Serpinb1a, Serpinb1-ps1, Serpinb1c, Serpinb6b, Serpinb9, Serpinb9b, Serpinb1b, LOC628301, Serpinb9c, Serpinb9d, Serpinb9e, Serpinb9f
Downstream geneOTTMUSG00000000724, Serpinb9g, LOC100041370, EG619715, LOC382743, OTTMUSG00000000712, LOC193403, Vmn2r-ps94, OTTMUSG00000000720, Serpinb6c, Serpinb6a, Nqo2, 4930482L21Rik, Ripk1, Bphl, Tubb2a, LOC100042686, Tubb2b, 2310047M15Rik, 3110004L20Rik, LOC620132
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122F16.bB6Ng01-122F16.g
ACCDH925802DH925803
length1,2341,148
definitionDH925802|Mus musculus domesticus DNA, BAC clone: B6Ng01-122F16, 5' end.DH925803|Mus musculus domesticus DNA, BAC clone: B6Ng01-122F16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctattagacctccaaaggagacctaattccaactctcgtcaaatg
attacacaaaatagatacagaaggtactcttcccaattcattctatgaag
ccacaattactctgatacctaagccacactaagattcaacaaagaaggag
aacttcagatcaatttctcttattaatatcgatgccaaaatactcaataa
aatccttgcaaaccaaatccaaaaacacatcaaaaggatcatccatcatt
accaagtaggcttcatcccagggatgcagggatggtttaatatacggaaa
tttatcaacgtaatccactatatagacaaactcaaagacaaaaatcacat
tatcatttcattagatgctgtgaaagcatttgacaaaaatccaacacccc
ttcatgagaaaagccatggattgatcaggaattcaaggcccattccttaa
cataataaaagcaatatacagcaaaccagtggcaaacatcaacctaaatg
gagagaagctggaagcattcccactaaaatctgggattagaaaaggctgc
ccacattctccatacctattcaatatagtacttgaagtcctagccagagt
aatttgacaacaaaaggagatcaagaggatacaaattggaaaggtagaat
tcaaaacatccctacttgcagatgatatgatagtatatataagtgatcct
aaaaattccaccagacaactcctaaacctgataaacagcttcattgaagt
agctggatataaaattaactcaaacaaatcagtgacctttctgtacacaa
aggataaacaggctacgaaagagattagggaaaccctccacaatagtcac
aaataatataaaataccttggtgtgaccctaactaagaaagtaaaaaatc
tttatgacagaacttgaagtctctgagaaagaaattgaagagatctcaga
agatgaaaggatctcatgctcatgggattggcaggattaatatagtaaaa
tgactatctgctgaaagcatctacaaatcatgcatcgcatcaactcactc
attcttcactggagttagaaagggcattggcaattactggataacaagaa
ctaggatagcaaagtatactcacataaagatctctgtagaatctgatgcc
tgaactcaaggtatctactagccatgggataactgctgctaatcagagca
tgatgagagatcatgtgatatagatgatagtgaa
gaattcagaatttaaaattgaacctaaaactgtaattccttaaattaatg
ggacgagaaatttttgaacatgcacgttgcactctgaaaaattggctttc
gaaaaaaaggggggtgggatcatgttactgtacactaaaaaaaactctaa
aatttctatgccaaggaaatctctgattgtggggaagagggcatgtttgt
gttttttctacaggatgctgatgctaggtgccagagtgcttaatgagact
tgctgatgctgggaaaaagaatgatgctcatcatgaagtttgtatagtat
cctgacaattatgatagagaagctgtattgggcctacatccctgatgcac
ccttttatacatccaacaatatgggaaggtctagaagtagtggtaatggt
aaacaacactaagttgatggatatgcctaactgaggaaattttactatca
atagagaaattaattactaaagatttagaactaatgtctccatatgcttt
tgtaggatgtgcagctacaggtgcttctgccccagttttgcaaagaaaaa
gttattagcttcttggaacagcaatagatacagaataaagaaaaaaatct
gagtgcacagctctccacattgtccacacattaccctttttcttggctat
ctctcttaagagaggacctgacacttgccaatattactggattaagaaat
gtctcggcctgcttcctttgtgctgcattagatgtcctccttgactgttg
tcccttatcccatccctttgaatacgtcttgtgccagtcctaaaaatttt
gtccaattttgaagtatccttgttcttgatccctgaccaacaacaatgta
attctgctatactagtcttttttaataaattaaggattttcctcattaca
tttccaatgctatcccaaagcccccataccctcccaccttcctacccgtc
actccccacttctgggcctgacattcccttgtactgagaatataattttg
cacgaccatgggcctctgtttccactgatgccactaggcaccttctgtct
atgagctagagacggaagctccgggggtactgttgtccatttttgtccac
ctaagggttgcgatcttatcccttggaactttctatctcccattgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_33478061_33479243
seq2: B6Ng01-122F16.g_67_1214 (reverse)

seq1  CCCCAATGGAGGAGATAGAGAAAGTACCCAAGGAGATAAAGGGATCTGCA  50
      ||||||||  ||||||  |||||||  |||||| |||||   |||| |||
seq2  CCCCAATG--GGAGAT--AGAAAGT-TCCAAGG-GATAA---GATC-GCA  40

seq1  ACCCTTTAGGTGGAACAAAAATATGAACTAACTAGTACCCCCCGGAGCTC  100
      |||| |||||||| ||||||  ||| || ||| |||| ||||||||||| 
seq2  ACCC-TTAGGTGG-ACAAAA--ATGGAC-AAC-AGTA-CCCCCGGAGCTT  83

seq1  CTGTCTCTAGCTTCATATGTATCAGAAGTTGGCCTAGTTGGCCATCAGTG  150
      | ||||||||| |||||     |||||| | |||||||  | ||||||||
seq2  CCGTCTCTAGC-TCATA---GACAGAAGGT-GCCTAGT--GGCATCAGTG  126

seq1  GAAACAGAGGCCCATTGGTCGTGCAAAATTTATATGTCTCAGTACAGGGG  200
      |||||||||||||| ||||||||||||| |||||| |||||||||| |||
seq2  GAAACAGAGGCCCA-TGGTCGTGCAAAA-TTATAT-TCTCAGTACAAGGG  173

seq1  AATGTCAGGGCCAAGAAGT-GGGAGTGGACGGGTAGGGAAGTGGGAGGGT  249
      ||||||| |||| |||||| |||||| |||||||||| | ||||||||||
seq2  AATGTCA-GGCCCAGAAGTGGGGAGT-GACGGGTAGGAAGGTGGGAGGGT  221

seq1  ATGGGGGCTTTTGGGATAGCATTGGAAATGTAAATGAGGAAAATCCCTAA  299
      |||||||| |||||||||||||||||||||| |||||||||||||| |||
seq2  ATGGGGGC-TTTGGGATAGCATTGGAAATGT-AATGAGGAAAATCCTTAA  269

seq1  TTTAATTAAAAAAGACTAGTATAGCAGAATTTACATTGTTGTTGGTCAGG  349
      ||| ||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTT-ATTAAAAAAGACTAGTATAGCAGAA-TTACATTGTTGTTGGTCAGG  317

seq1  GATCAAGAACAAGGATACTTCAAAAATTGGACAAAAATTTTTAGGACTGG  399
      ||||||||||||||||||||| |||||||||| |||||||||||||||||
seq2  GATCAAGAACAAGGATACTTC-AAAATTGGAC-AAAATTTTTAGGACTGG  365

seq1  CACAAGACGTATTCAAAGGGATGGGATAAGGGACAACAGTCAAGGAGGAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGACGTATTCAAAGGGATGGGATAAGGGACAACAGTCAAGGAGGAC  415

seq1  ATCCTAATGCAGCACAAAGGAAGCAGGCCGAGACATTTCTTAATCCAGTA  499
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AT-CTAATGCAGCACAAAGGAAGCAGGCCGAGACATTTCTTAATCCAGTA  464

seq1  ATATTGGCAAGTGTCAGGTCCTCTCTTAAGAGAGATAGCCAAGAAAAAGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGGCAAGTGTCAGGTCCTCTCTTAAGAGAGATAGCCAAGAAAAAGG  514

seq1  GTAATGTGTGGACAATGTGGAGAGCTGTGCACTCAGATTTTTTTCTTTAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGTGTGGACAATGTGGAGAGCTGTGCACTCAGATTTTTTTCTTTAT  564

seq1  TCTGTATCTATTGCTGTTCCAAGAAGCTAATAACTTTTTCTTTGCAAAAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATCTATTGCTGTTCCAAGAAGCTAATAACTTTTTCTTTGCAAAAC  614

seq1  TGGGGCAGAAGCACCTGTAGCTGCACATCCTACAAAAGCATATGGAGACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCAGAAGCACCTGTAGCTGCACATCCTACAAAAGCATATGGAGACA  664

seq1  TTAGTTCTAAATCTTTAGTAATTAATTTCTCTATTGATAGTAAAATTTCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTCTAAATCTTTAGTAATTAATTTCTCTATTGATAGTAAAATTTCC  714

seq1  TCAGTTAGGCATATCCATCAACTTAGTGTTGTTTACCATTACCACTACTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTAGGCATATCCATCAACTTAGTGTTGTTTACCATTACCACTACTT  764

seq1  CTAGACCTTCCCATATTGTTGGATGTATAAAAGGGTGCATCAGGGATGTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACCTTCCCATATTGTTGGATGTATAAAAGGGTGCATCAGGGATGTA  814

seq1  GGCCCAATACAGCTTCTCTATCATAATTGTCAGGATACTATACAAACTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAATACAGCTTCTCTATCATAATTGTCAGGATACTATACAAACTTC  864

seq1  ATGATGAGCATCATTCTTTTTCCCAGCATCAGCAAGTCTCATTAAGCACT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGAGCATCATTCTTTTTCCCAGCATCAGCAAGTCTCATTAAGCACT  914

seq1  CTGGCACCTAGCATCAGCATCCTGTAGAAAAAACACAAACATGCCCTCTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCACCTAGCATCAGCATCCTGTAGAAAAAACACAAACATGCCCTCTT  964

seq1  CCCCACAATCAGAGATTTCCTTGGCATAGAAATTTTAGAGTTTTTTTTAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACAATCAGAGATTTCCTTGGCATAGAAATTTTAGAGTTTTTTTTAG  1014

seq1  TGTACAGTAACATGATCCCACCCCCCTTTTTTTCGAAAGCCAATTTTTCA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAGTAACATGATCCCACCCCCCTTTTTTTCGAAAGCCAATTTTTCA  1064

seq1  GAGTGCAACGTGCATGTTCAAAAATTTCTCGTCCCATTAATTTAAGGAAT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCAACGTGCATGTTCAAAAATTTCTCGTCCCATTAATTTAAGGAAT  1114

seq1  TACAGTTTTAGGTTCAATTTTAAATTCTGAATTC  1183
      ||||||||||||||||||||||||||||||||||
seq2  TACAGTTTTAGGTTCAATTTTAAATTCTGAATTC  1148