BAC Information

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BAC

Clone NameB6Ng01-124F06
Chromosome13 (Build37)
Map Location 85,649,924 - 85,832,025
singlet/doubletdoublet
Overlap geneLOC435373
Upstream geneLOC382786, LOC100042841, LOC100042851, LOC100042857, LOC100042862, Ccnh, Rasa1
Downstream geneLOC675662, Cox7c, LOC100042887, LOC100042893
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124F06.bB6Ng01-124F06.g
ACCDH927264DH927265
length270257
definitionDH927264|Mus musculus domesticus DNA, BAC clone: B6Ng01-124F06, 5' end.DH927265|Mus musculus domesticus DNA, BAC clone: B6Ng01-124F06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,649,924 - 85,650,193)(85,831,786 - 85,832,025)
sequence
ccctggaatgaattatagctatggatagtgggaactgaacttgggtcctc
tgcaagaggtatatgagctcttaaaccttgaaccatttcttcagccctaa
gaaatagttttaaaagtagtggtatctggtggagcatcattgtgctaaaa
ataatgtgtgtgtgtgtgagtgtgtgtatgtatgtgtatgtgtgtgtgca
tgtgtgtgtgtgtattagtttctttcatacaattagttctctgaaatacc
acacattacttgcacataca
cggaattgaagaacaggctcccactgagtacataattattccatgataaa
taaagaagaaaggaacttaaacactctgaaaaagagcaggtcctgtgtac
ctttgattggtacaattatggaaccatgctcacaaccaagaaaactcaat
tcatctctaagcatcatttaaagtagagagtaatcttgtactgattttaa
caatcagtggttgtgtacgatgtgtccctcaggtttagatttggaaacaa
gttgtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_85649924_85650193
seq2: B6Ng01-124F06.b_50_319

seq1  CCCTGGAATGAATTATAGCTATGGATAGTGGGAACTGAACTTGGGTCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGAATGAATTATAGCTATGGATAGTGGGAACTGAACTTGGGTCCTC  50

seq1  TGCAAGAGGTATATGAGCTCTTAAACCTTGAACCATTTCTTCAGCCCTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGAGGTATATGAGCTCTTAAACCTTGAACCATTTCTTCAGCCCTAA  100

seq1  GAAATAGTTTTAAAAGTAGTGGTATCTGGTGGAGCATCATTGTGCTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGTTTTAAAAGTAGTGGTATCTGGTGGAGCATCATTGTGCTAAAA  150

seq1  ATAATGTGTGTGTGTGTGAGTGTGTGTATGTATGTGTATGTGTGTGTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTGTGTGTGTGTGAGTGTGTGTATGTATGTGTATGTGTGTGTGCA  200

seq1  TGTGTGTGTGTGTATTAGTTTCTTTCATACAATTAGATCTCTGAAATACC  250
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGTGTGTGTGTGTATTAGTTTCTTTCATACAATTAGTTCTCTGAAATACC  250

seq1  ACACATAACTTGCAGATACA  270
      |||||| ||||||| |||||
seq2  ACACATTACTTGCACATACA  270

seq1: chr13_85831786_85832025
seq2: B6Ng01-124F06.g_85_324 (reverse)

seq1  TTACAACTTGTTTCCAAATCTAAACCTGAGGGACACATCGTACACAACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAACTTGTTTCCAAATCTAAACCTGAGGGACACATCGTACACAACCA  50

seq1  CTGATTGTTAAAATCAGTACAAGATTTCTCTCTACTTTAAATGATGCTTA  100
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTGATTGTTAAAATCAGTACAAGATTACTCTCTACTTTAAATGATGCTTA  100

seq1  GAGATGAATTGAGTTTTCTTGGTTGTGGGCATGGTTCCATAATTGTACCA  150
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GAGATGAATTGAGTTTTCTTGGTTGTGAGCATGGTTCCATAATTGTACCA  150

seq1  ATCAAAGGTACACAGGACCTGCTCTTTTTCAGAGTGTTTAAGTTCCTGAG  200
      |||||||||||||||||||||||||||||||||||||||||||||||   
seq2  ATCAAAGGTACACAGGACCTGCTCTTTTTCAGAGTGTTTAAGTTCCTTTC  200

seq1  GCAGTGATTTATCATGGAATAATTATGTACTCAGTGGGAG  240
          | ||||||||||||||||||||||||||||||||||
seq2  TTCTTTATTTATCATGGAATAATTATGTACTCAGTGGGAG  240