BAC Information

Click to search

BAC

Clone NameB6Ng01-124P10
Chromosome13 (Build37)4 (Build37)
Map Location 66,769,927 - 66,770,127146,888,716 - 146,889,594
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC628722, LOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746, LOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik
Downstream geneMzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124P10.bB6Ng01-124P10.g
ACCDH927732DH927733
length984915
definitionDH927732|Mus musculus domesticus DNA, BAC clone: B6Ng01-124P10, 5' end.DH927733|Mus musculus domesticus DNA, BAC clone: B6Ng01-124P10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(66,769,927 - 66,770,127)(146,888,716 - 146,889,594)
sequence
gaattcataaaggagagaaaccttacaaatgcagtgaatgtggcaaatgc
tttactgataaaaccagtctgagaattcatcagagaattcatacaggaga
gaaaccttacaaatgcagtgaatgtggcaaatgctttactgaaaaaagca
gtctgagaattcatcagagaattcatacaggagagaaaccttacaaatgc
agtgaatgtggcaaatgctttactgaaaaaagcagtctgagaattcatca
gagaattcatacaggagagaaaccttacaaatgcagtgaatgtgacaaat
gctttacccaacaatcctatcttagtattcatcagagaattcatacagga
gagaaaccttacaaatgcagtgaatgtgacaaatgctttaccaaacaatc
caatcttagtattcatcagagaattcatacaggagagaaaccttacaaat
gcagtgaatgtgacaaatgctttacccaacaatcccatcttagtattcat
cagagaattcatacaggagagaaaccttacaaatgcagtgaatgtgacaa
atgctttacccaacaatcctatcttagtattcatcagagaattcatgcag
gagagaaaccttacaaatgcagtgaatgtgacaaatgctttactacaaaa
ggcaatctgataattcatcagagaattcatacaagagagaaaccttacaa
atgtagtgaatgtggcaaatgctttactgaaaaaagcagtctgagaattc
atcagagaattcatacaggagagaaaccttacaaatgcagtgaatgtgac
aaatgctttaccaacaatccaaacttagtattcatcagagaattcataca
ggagagaaaccttacaaatgcagtgaatgtgaaaaatgctttaaatgaaa
aaaacagtctgaaaattcatcagagaattcatacaggagagagaccttac
aaatgtagtgaatgtgacaaatgctttacccaaa
gaattcatacaggagagaaaccttacaaatgcagtgaatgtgacaaatgc
tttactgaaaaaggcaatttgagaaggcatcagaaaattcatacaggaga
gaaaccttacaaatgtagtgaatgtgacaaatgctttacccaaaaattcc
aacttagtattcatcagagaattcatacaggagagaaaccttacaagtgt
agtgaatgtgaaaaatgttttactgacaaaggcagtctgagaaggcatca
gaaaattcatacaggagagaaactttcaaatgtagtgaaggtgacaaatg
ttttaatcacaaatcccatcttagtatttatcagagaattcatacaggag
aggaaccttacaaatagtttgtatgtgacaaatacaatactcacaatgtc
agtctgagaaatcatcagttatttcatacagtagagaatctttataaatg
aagtgaatgagacaattctttaccaagatacagcatcttaaaattcacta
gagaatacttacagaagaggaacttttcaaatatatcgaaggtatgaatt
ctttatttttgcctatttcctagaatgtaactgtgaatgctaataagcta
gaaacttaacgcatgtattgtatgaagaaatatctttgaattcattttag
tcagagaaaacatctaagaactttttaagggaaagtatttctgttgagaa
aaaggtggcatatgttttattcatggcatattcttggcaatactcaaggc
tccacactagagaattagtataattatgagaatcttttgaaaattttcat
gcatgttcaatcttaaatatgtcgactctgacaatttgaaaaatgtagca
agcctttctttctttcttctttcttcttcttcttcttcttcttttttggg
gggggggttggtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_66769927_66770127
seq2: B6Ng01-124P10.b_140_340 (reverse)

seq1  CACATTCATTGCATTTGTAAGGTTTCTCTAAAACGTGTGTTCCTTTAAGT  50
      |||||||| ||||||||||||||||||||      ||  |||  | | | 
seq2  CACATTCACTGCATTTGTAAGGTTTCTCTCCTGTATGAATTCTCTGATGA  50

seq1  ATTTGGAGAGTACAGTGACACGCAAAGGCTTTAACACTTTTATTACGATC  100
      |||   ||| | |  |     | ||||  |||  ||| || | | |  | 
seq2  ATTCTCAGACTGCTTTTTTCAGTAAAGCATTTGCCACATTCACTGCATTT  100

seq1  ACAGGGCTTCTCTCAACTATGTGCTCATTTATGTACTTGGAAATGACTGT  150
        | || |||||||   ||||   ||  | ||| | |   | |   || |
seq2  GTAAGGTTTCTCTCCTGTATGAATTCTCTGATGAATTCTCAGACTGCTTT  150

seq1  GATATGTAAATGTTTTCTCATATCAATTACATTCATAAGGTTTCTCTCCT  200
        |  |||||   |||  || ||  | | ||||  |||||||||||||||
seq2  TTTCAGTAAAGCATTTGCCACATTCACTGCATTTGTAAGGTTTCTCTCCT  200

seq1  G  201
      |
seq2  G  201

seq1: chr4_146888716_146889594
seq2: B6Ng01-124P10.g_112_982

seq1  AAATGCTTTACTGAAAAAGGCAATTTGAGAAGGCATCAGAAAATTCATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTTTACTGAAAAAGGCAATTTGAGAAGGCATCAGAAAATTCATAC  50

seq1  AGGAGAGAAACCTTACAAATGTAGTGAATGTGACAAATGCTTTACCCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGAAACCTTACAAATGTAGTGAATGTGACAAATGCTTTACCCAAA  100

seq1  AATTCCAACTTAGTATTCATCAGAGAATTCATACAGGAGAGAAACCTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCAACTTAGTATTCATCAGAGAATTCATACAGGAGAGAAACCTTAC  150

seq1  AAGTGTAGTGAATGTGAAAAATGTTTTACTGACAAAGGCAGTCTGAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTAGTGAATGTGAAAAATGTTTTACTGACAAAGGCAGTCTGAGAAG  200

seq1  GCATCAGAAAATTCATACAGGAGAGAAACTTTCAAATGTAGTGAAGGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGAAAATTCATACAGGAGAGAAACTTTCAAATGTAGTGAAGGTGA  250

seq1  CAAATGTTTTAATCACAAATCCCATCTTAGTATTTATCAGAGAATTCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTTTTAATCACAAATCCCATCTTAGTATTTATCAGAGAATTCATA  300

seq1  CAGGAGAGGAACCTTACAAATAGTTTGTATGTGACAAATACAATACTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAGGAACCTTACAAATAGTTTGTATGTGACAAATACAATACTCAC  350

seq1  AATGTCAGTCTGAGAAATCATCAGTTATTTCATACAGTAGAGAATCTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCAGTCTGAGAAATCATCAGTTATTTCATACAGTAGAGAATCTTTA  400

seq1  TAAATGAAGTGAATGAGACAATTCTTTACCAAGATACAGCATCTTAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAAGTGAATGAGACAATTCTTTACCAAGATACAGCATCTTAAAAT  450

seq1  TCACTAGAGAATACTTACAGAAGAGGAACTTTTCAAATATATCGAAGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAGAGAATACTTACAGAAGAGGAACTTTTCAAATATATCGAAGGTA  500

seq1  TGAATTCTTTATTTTTGCCTATTTCCTAGAATGTAACTGTGAATGCTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCTTTATTTTTGCCTATTTCCTAGAATGTAACTGTGAATGCTAAT  550

seq1  AAGCTAGAAACTTAACGCATGTATTGTATGAAGAAATATCTTTGAATTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAGAAACTTAACGCATGTATTGTATGAAGAAATATCTTTGAATTCA  600

seq1  TTTTAGTCAGAGAAAACATCTAAGAACTTTTTAAGGGAAAGTATTTCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTCAGAGAAAACATCTAAGAACTTTTTAAGGGAAAGTATTTCTGT  650

seq1  TGAGAAAAAGGTGGCATATGTTTTATTCATGGCATATTCTTGGCAATACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAAAGGTGGCATATGTTTTATTCATGGCATATTCTTGGCAATACT  700

seq1  CAAGGCTCCACACTAGAGAATTAGTATAATTATGAGAATCTTTTGAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTCCACACTAGAGAATTAGTATAATTATGAGAATCTTTTGAAAAT  750

seq1  TTTCATGCAATGTTCAAATCTTAAATAATGTCGACTCTGACAATTTGAAA  800
      |||||||| |||||| |||||||||| |||||||||||||||||||| ||
seq2  TTTCATGC-ATGTTC-AATCTTAAAT-ATGTCGACTCTGACAATTTG-AA  796

seq1  AAATGTAGCAAGCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  850
      |||||||||||||||||||||||||| ||||||| |||||   |||||  
seq2  AAATGTAGCAAGCCTTTCTTTCTTTC-TTCTTTC-TTCTT--CTTCTTCT  842

seq1  TTTCTTTTTTTTGGGGGGGGGTTGGTTTT  879
      | |  |||||| |||||||||||||||||
seq2  TCTTCTTTTTTGGGGGGGGGGTTGGTTTT  871