BAC Information

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BAC

Clone NameB6Ng01-126F07
Chromosome13 (Build37)
Map Location 92,870,921 - 93,038,606
singlet/doubletdoublet
Overlap geneRasgrf2, Msh3
Upstream geneAcot12, Zcchc9, Ckmt2, Rasgrf2
Downstream geneDhfr, 6430502M16Rik, 4930405M20Rik, Zfyve16, LOC100039070, Spz1, Serinc5, Ppia-ps13_1124.1, Thbs4, EG624619, EG218444, Papd4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126F07.bB6Ng01-126F07.g
ACCDH928727DH928728
length1,081986
definitionDH928727|Mus musculus domesticus DNA, BAC clone: B6Ng01-126F07, 5' end.DH928728|Mus musculus domesticus DNA, BAC clone: B6Ng01-126F07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,870,921 - 92,872,003)(93,037,617 - 93,038,606)
sequence
gaattctgtcattggcccagagagcctgaaatctcttaaccaaatctgtc
acttgcctctagcaagagaacggtatgtcccagaaaatgtttatcgtgct
gtctgattttcctcgcccttaggttcaaagtttcatttgtttaactggta
gggttttgtttgtttgtttgtttgtttgtttgtttgtttgtttttcagcc
catatgattatatcaaatccttctgaactgaggtataaagataaagcata
tggaaatttcaagaaaagctataagtaatgatggatgtaatttctcatga
agcttaacttatgttttaaacgtcattaaagctacaagcaggtgcaaacc
agaatgatgggccttagagctttccctgaagtgcatcaatgactagttgc
ttcctttctaccttttggaacctccctctgttttctcaagtaaattctga
ttatccaccacctgccacccgccacccaccaccagtcaccagctacctgc
caccagtcaccagtcacctgccaccagtcacctgccaccaaccagccacc
tgccaccagccaccagccatccaccatctcttctgcaaattagaatgttg
gttttcatttctttagcctggagaaagcagtggaactaataactaagttc
tattgttctagccttcaaagtcactcaaagacacagattccctttagctg
aatggacatgaatgttgagttaacagaagacacaattatctcctgcagcc
tcaacctgaagtgccctagacagctacagcaaagagaggatggggtttgc
ccagcatcttaagattaataaggactctggtctagactaattacaaaccc
ctatgcctcacagaccctcaaaatccagtggtccagaagcacaaccacta
accagatacatgcagatcaaggctgttgaaccttcatatataaaagttcc
acctgtcctggaaggggtgtgggtggatgctctctgtcaccttgccacgt
gccaccgaggcagttggggaaagctggacccaggctcatgaatattaggt
gagctgggttctgcccctcactggctgcagc
gaattctcacctgaggaatacagaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgtggatgtggagaaagaggaacagggcagaattcttacat
taacctctgggtggtggagtcagcagagaaggggattgctgtgagacctt
gcagagctttctagaccacgcattcttttttccagtggcttttctttagc
agtaaaactcataaacaaagggtctacctgctcgttcttaggctgtttgg
aaaagggaataactggaaagaagtttcctatcctggagcagagcgcagta
taagccgtgctgaagaacaaaggctaagacctgaggacaggagtgtgagc
acggctgctcgcctgactctgctgtgcctcccgttcttcatgctgtgcac
gcattgacttaatgggcagcggcagtccctggagtgggcgtttgagctgc
tccgtggttctcaggctgcaccttgcttttatgggcttttcagaaggttc
accaagccttcatcaccacctcccacggttaggatgcttccttcctggcg
ccttgaaatttgatatctgcctttgatctagttactctcggggattattt
cataaaatgccagcgtgccttcactgagcattcttaaacccaagaattat
ttagtatagttagtaattttacttttaatcaataatactaaatttttggc
ttgttttcacttaattttatgactacatggcattttttgtactgttcttt
tctaaaagatacactttttaaaataacttaattttatttatctgtgttgg
gctattgctgcacgctaatcccttggaactggatttacaaacaattatga
gctgccttggggtgtgcttgaaattaactaggtccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_92870921_92872003
seq2: B6Ng01-126F07.b_49_1129

seq1  GAATTCTGTCATTGGCCCAGAGAGCCTGAAATCTCTTAACCAAATCTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCATTGGCCCAGAGAGCCTGAAATCTCTTAACCAAATCTGTC  50

seq1  ACTTGCCTCTAGCAAGAGAACGGTATGTCCCAGAAAATGTTTATCGTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCCTCTAGCAAGAGAACGGTATGTCCCAGAAAATGTTTATCGTGCT  100

seq1  GTCTGATTTTCCTCGCCCTTAGGTTCAAAGTTTCATTTGTTTAACTGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGATTTTCCTCGCCCTTAGGTTCAAAGTTTCATTTGTTTAACTGGTA  150

seq1  GGGTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTCAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTCAGCC  200

seq1  CATATGATTATATCAAATCCTTCTGAACTGAGGTATAAAGATAAAGCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGATTATATCAAATCCTTCTGAACTGAGGTATAAAGATAAAGCATA  250

seq1  TGGAAATTTCAAGAAAAGCTATAAGTAATGATGGATGTAATTTCTCATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATTTCAAGAAAAGCTATAAGTAATGATGGATGTAATTTCTCATGA  300

seq1  AGCTTAACTTATGTTTTAAACGTCATTAAAGCTACAAGCAGGTGCAAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAACTTATGTTTTAAACGTCATTAAAGCTACAAGCAGGTGCAAACC  350

seq1  AGAATGATGGGCCTTAGAGCTTTCCCTGAAGTGCATCAATGACTAGTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGATGGGCCTTAGAGCTTTCCCTGAAGTGCATCAATGACTAGTTGC  400

seq1  TTCCTTTCTACCTTTTGGAACCTCCCTCTGTTTTCTCAAGTAAATTCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCTACCTTTTGGAACCTCCCTCTGTTTTCTCAAGTAAATTCTGA  450

seq1  TTATCCACCACCTGCCACCCGCCACCCACCACCAGTCACCAGCTACCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCACCACCTGCCACCCGCCACCCACCACCAGTCACCAGCTACCTGC  500

seq1  CACCAGTCACCAGTCACCTGCCACCAGTCACCTGCCACCAACCAGCCACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGTCACCAGTCACCTGCCACCAGTCACCTGCCACCAACCAGCCACC  550

seq1  TGCCACCAGCCACCAGCCATCCACCATCTCTTCTGCAAATTAGAATGTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACCAGCCACCAGCCATCCACCATCTCTTCTGCAAATTAGAATGTTG  600

seq1  GTTTTCATTTCTTTAGCCTGGAGAAAGCAGTGGAACTAATAACTAAGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCATTTCTTTAGCCTGGAGAAAGCAGTGGAACTAATAACTAAGTTC  650

seq1  TATTGTTCTAGCCTTCAAAGTCACTCAAAGACACAGATTCCCTTTAGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTCTAGCCTTCAAAGTCACTCAAAGACACAGATTCCCTTTAGCTG  700

seq1  AATGGACATGAATGTTGAGTTAACAGAAGACACAATTATCTCCTGCAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGACATGAATGTTGAGTTAACAGAAGACACAATTATCTCCTGCAGCC  750

seq1  TCAACCTGAAGTGCCCTAGACAGCTACAGCAAAGAGAGGATGGGGTTTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCTGAAGTGCCCTAGACAGCTACAGCAAAGAGAGGATGGGGTTTGC  800

seq1  CCAGCATCTTAAGATTAATAAGGACTCTGGTCTAGACTAATTTACAAACC  850
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCAGCATCTTAAGATTAATAAGGACTCTGGTCTAGACTAA-TTACAAACC  849

seq1  CCTATGCCTCACAGACCCTCAAAATCCAGTGGTCCAGAAAGCACAACCAC  900
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CCTATGCCTCACAGACCCTCAAAATCCAGTGGTCCAG-AAGCACAACCAC  898

seq1  TAACCAGATACATGCAGATCAAAGGCTG-TGAACCTTCATATATTAAAAG  949
      |||||||||||||||||||| ||||||| |||||||||||||| ||||||
seq2  TAACCAGATACATGCAGATC-AAGGCTGTTGAACCTTCATATA-TAAAAG  946

seq1  TTTCCACCTGTCCTGGAAGGGGTGTGGGTGGATGCTCTCTGTCACCTTGC  999
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTCCACCTGTCCTGGAAGGGGTGTGGGTGGATGCTCTCTGTCACCTTGC  995

seq1  CACGTGCCACCGGAGGCAGTT-GGGACAGCTGACCCCAGGTTCATG-AGA  1047
      ||||||||||| ||||||||| |||| |||||  |||||| ||||| | |
seq2  CACGTGCCACC-GAGGCAGTTGGGGAAAGCTGGACCCAGGCTCATGAATA  1044

seq1  GTAGGTGAGCT-GGCTCTGCCCCTCACTGGCTGCAGC  1083
       |||||||||| || ||||||||||||||||||||||
seq2  TTAGGTGAGCTGGGTTCTGCCCCTCACTGGCTGCAGC  1081

seq1: chr13_93037617_93038606
seq2: B6Ng01-126F07.g_66_1051 (reverse)

seq1  GGGACCTGAGTTAAATTCCAAGCAC-CCACATGGCAGCTCATAATTGTTT  49
      ||||||| |||| |||| ||||||| || || ||||||||||||||||||
seq2  GGGACCT-AGTT-AATTTCAAGCACACCCCAAGGCAGCTCATAATTGTTT  48

seq1  GTAACTCCAGTTCCAGGGGATCTACGTGCATGCATAGCACCAACACAGAT  99
      |||| |||||||||| |||||   ||||||   ||||| |||||||||||
seq2  GTAAATCCAGTTCCAAGGGATTAGCGTGCAGCAATAGC-CCAACACAGAT  97

seq1  AAAATAAAAATAAAGTTATTTTAAAAAGTGTATCTTTTAGAAAAAGAACA  149
      |||   ||||| |||||||||||||||||||||||||||| |||||||||
seq2  AAA--TAAAATTAAGTTATTTTAAAAAGTGTATCTTTTAG-AAAAGAACA  144

seq1  GTACAAAAATGACCATGTAGTCATAAAAATTAAGTGAAAACAAGCC-AAA  198
      |||||||||   |||||||||||| ||||||||||||||||||||| |||
seq2  GTACAAAAAATGCCATGTAGTCAT-AAAATTAAGTGAAAACAAGCCAAAA  193

seq1  ATTTAGTATTATTGATTAAAAGTAAAATTACTAACTATACTAAATAATTC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTATTATTGATTAAAAGTAAAATTACTAACTATACTAAATAATTC  243

seq1  TTGGGTTTAAGAATGCTCAGTGAAGGCACGCTGGCATTTTATGAAATAAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTTAAGAATGCTCAGTGAAGGCACGCTGGCATTTTATGAAATAAT  293

seq1  -CCCGAGAGTAACTAGATCAAAGGCAGATATCAAATTTCAAGGCGCCAGG  347
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGAGAGTAACTAGATCAAAGGCAGATATCAAATTTCAAGGCGCCAGG  343

seq1  AAGGAAGCATCCTAACCGTGGGAGGTGGTGATGAAGGCTTGGTGAACCTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGCATCCTAACCGTGGGAGGTGGTGATGAAGGCTTGGTGAACCTT  393

seq1  CTGAAAAGCCCATAAAAGCAAGGTGCAGCCTGAGAACCACGGAGCAGCTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAAGCCCATAAAAGCAAGGTGCAGCCTGAGAACCACGGAGCAGCTC  443

seq1  AAACGCCCACTCCAGGGACTGCCGCTGCCCATTAAGTCAATGCGTGCACA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGCCCACTCCAGGGACTGCCGCTGCCCATTAAGTCAATGCGTGCACA  493

seq1  GCATGAAGAACGGGAGGCACAGCAGAGTCAGGCGAGCAGCCGTGCTCACA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAAGAACGGGAGGCACAGCAGAGTCAGGCGAGCAGCCGTGCTCACA  543

seq1  CTCCTGTCCTCAGGTCTTAGCCTTTGTTCTTCAGCACGGCTTATACTGCG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTCCTCAGGTCTTAGCCTTTGTTCTTCAGCACGGCTTATACTGCG  593

seq1  CTCTGCTCCAGGATAGGAAACTTCTTTCCAGTTATTCCCTTTTCCAAACA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTCCAGGATAGGAAACTTCTTTCCAGTTATTCCCTTTTCCAAACA  643

seq1  GCCTAAGAACGAGCAGGTAGACCCTTTGTTTATGAGTTTTACTGCTAAAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAAGAACGAGCAGGTAGACCCTTTGTTTATGAGTTTTACTGCTAAAG  693

seq1  AAAAGCCACTGGAAAAAAGAATGCGTGGTCTAGAAAGCTCTGCAAGGTCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCACTGGAAAAAAGAATGCGTGGTCTAGAAAGCTCTGCAAGGTCT  743

seq1  CACAGCAATCCCCTTCTCTGCTGACTCCACCACCCAGAGGTTAATGTAAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAATCCCCTTCTCTGCTGACTCCACCACCCAGAGGTTAATGTAAG  793

seq1  AATTCTGCCCTGTTCCTCTTTCTCCACATCCACACCAGCATCTGCTGTCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGCCCTGTTCCTCTTTCTCCACATCCACACCAGCATCTGCTGTCA  843

seq1  CCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAG  893

seq1  GGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAGCATTTTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAGCATTTTT  943

seq1  TCAGGTGCTTCTCTGCCATTCTGTATTCCTCAGGTGAGAATTC  990
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTGCTTCTCTGCCATTCTGTATTCCTCAGGTGAGAATTC  986