BAC Information

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BAC

Clone NameB6Ng01-126H12
Chromosome13 (Build37)
Map Location 20,931,693 - 20,932,767
singlet/doubletsinglet
Overlap geneAoah
Upstream geneLOC432730, Elmo1, LOC100040226, LOC665381, LOC665386
Downstream geneOlfr1370, Olfr1369-ps1, Olfr42, Olfr1368, Trim27, Gpx5, LOC625752, Gpx6, Olfr1367, Zfp96, LOC665454, Zkscan3, Pgbd1, 4930470G03Rik, Zfp187, 4921504I05Rik, OTTMUSG00000000421, AK157302, LOC100040340, Zfp192, Olfr1366, Olfr1365, Olfr1364, Olfr1362, Olfr1363-ps1, Olfr11, Olfr1361, Olfr1360, Olfr1359, Hist1h2bl, Hist1h2ai, Hist1h3h, Hist1h2aj, Hist1h2bm, Hist1h4j, Hist1h4k, Hist1h2ak, Hist1h2bn, LOC100041150, Hist1h1b, Hist1h3i, Hist1h2an, Hist1h2bp, LOC665596, Rp23-480b19.10, LOC100041230, Hist1h4m, Hist1h2ao, LOC665622
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126H12.bB6Ng01-126H12.g
ACCDH928832DH928833
length1,2441,053
definitionDH928832|Mus musculus domesticus DNA, BAC clone: B6Ng01-126H12, 5' end.DH928833|Mus musculus domesticus DNA, BAC clone: B6Ng01-126H12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagtcccatcttttaagggggttatttgatt
ttctggagtccagcctcttgagttctttatatatattggatattagtccc
ctctctgatttaagataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaagctttgcagtttca
tgaggtcccatttgtcaatcctcgatcttacagcacaagccattgctgtt
ctattcaggaattttttccctgtgcccatatcttcgagacttttccccac
cttctcctctgtaagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagagaggaatgggtagattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtccaagatcaagt
gaacataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtcactataccagtaccatgcagtttttataacaactgc
tctgtaataaagctttaggtcaggcatggtgattccaccagaggtacttt
tatccttgagaagagcttttgctaccctaggttttttgttattccagatg
aatttgcagattgctctttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgaacatggggagatcttttccatc
ttctgagatcttctttaatttctttcttcagggacttgaagtttttatca
tacatatctttcacttccttagatagagtcaccgccaaggtattttatat
tatttgtgactattgagaaaggtgttgtttccttatttctttctcagcct
gtttatctttctgtagagaaggccattgactgtttgagttatttatattc
cagctactcatcgaagctgtttatcaagtttacaagttcctctggtgaat
ttcagtcccttaaatatatcttatcaaactatctggcgaaaagggaattt
gactcatcttccaattgattccttgattcctttgatgcgatgtactggct
gagaacttcaaagactatggtttcaagagcacgtggacgtatca
gaattccatgctggaaaaaggaaaatcctggaagcctggatgtagccaga
agagaaccttgtttcctataaaagagatttcacagttttcaccacttgat
agaatagaatgctttgcagaatgaaactgaagcccagataatgatgggtc
aatggcttagattttcatatctctgggcctctatttaaactttagtctca
cttcagaacagaagattagctggagagcattgctgccatcactttttcct
ctgcccagtgtggtcacattgtacaaacctccctctctacttttttacta
ttaacttggccattttagtaggattagtgatggatggcctaggccagtga
ctgcactgtgacctcaagttgggtaacatggcttattgttgagagactgt
catgaacatgaacatgactcctcctatccagtgctacaaaaagtgatcaa
aacagaaggaaaagaatgaaaaggaaaacaaagaaacagacaaggatggt
tcagaggcactgaggctaggaaccctggaggacagagggctgaaagctac
tggaagagagcagagtatgtattgggagctctgagatagtcagtcaagca
ctttattggtggataccatagggttattgttggtggtgctatctgtaaat
cttgtgtgcaaagtgcttgggaacaaacggagccagatttccacactctt
tgtctatactcatatataactatacaccatactcacagttttatgatgtc
tgagccaaatgtctgaaccaagaaatagcagcggttcttaagacagcttt
tctagaaaaataaaaatggtaatagaatactttgtgtatcatagtttaga
acacgagtcagtgttcatcttgtatgaagaacgagactaatgattcatga
tgactgagtattagctttcagtattttaaagttacgtgctaataaagcat
cacttcaggggtgagcattgctgcagagatcacatgtgactcacacattg
tgctcctagattagggatgaggtaccacttctggacccctccacaccagg
cac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_20931693_20932767
seq2: B6Ng01-126H12.g_71_1123 (reverse)

seq1  GTGCCTGGTGCTGGAGGAGTCCAGAAGTGGGTACCTCATCCCCTAAATCT  50
      |||||||||| |||||| |||||||||| |||||||||||||   |||||
seq2  GTGCCTGGTG-TGGAGGGGTCCAGAAGT-GGTACCTCATCCC--TAATCT  46

seq1  A-GAGCAACAATTGGTGTGAGTCACAATGTGAATCTTCTGCAGCCATTGC  99
      | |||| |||||  ||||||||||| ||||| ||| ||||||| || |||
seq2  AGGAGC-ACAAT--GTGTGAGTCAC-ATGTG-ATC-TCTGCAG-CAATGC  89

seq1  TCCAACCCCTGGAAGTGATGCTTTAATAGCCACGGTAACTTTAAAATTAC  149
      ||  |||||| |||||||||||||| ||| ||| |||||||||||| |||
seq2  TC--ACCCCT-GAAGTGATGCTTTATTAG-CAC-GTAACTTTAAAA-TAC  133

seq1  TGAAAGCTAATACTCAGTCATCATGAATCATTTAGTCTTCGTTCTTCATA  199
      |||||||||||||||||||||||||||||| |||||| ||||||||||||
seq2  TGAAAGCTAATACTCAGTCATCATGAATCA-TTAGTC-TCGTTCTTCATA  181

seq1  C-AGATGAACACTGACTCGTGTTCTAAACTATGATAACACAAAGTATTCT  248
      | ||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CAAGATGAACACTGACTCGTGTTCTAAACTATGAT-ACACAAAGTATTCT  230

seq1  ATTTACCATTTTTATTTTTCTTAGAAAAGCTGTTCTTGAAGACCGCCTGC  298
      | |||||||||||||||||| ||||||||||| |||| |||| |  ||||
seq2  A-TTACCATTTTTATTTTTC-TAGAAAAGCTG-TCTT-AAGAACCGCTGC  276

seq1  TATTTCTTGGTTCAGACATTTGGCTCAGACATCATAAAACTGTGAGTATG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTGGTTCAGACATTTGGCTCAGACATCATAAAACTGTGAGTATG  326

seq1  GTGTATAGTTATATATGAGTATAGACAAAGAGTGTGGAAATCTGGCTCCG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATAGTTATATATGAGTATAGACAAAGAGTGTGGAAATCTGGCTCCG  376

seq1  TTTGTTCCCAAGCACTTTGCACACAAGATTTACAGATAGCACCACCAACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCCCAAGCACTTTGCACACAAGATTTACAGATAGCACCACCAACA  426

seq1  ATAACCCTATGGTATCCACCAATAAAGTGCTTGACTGACTATCTCAGAGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCCTATGGTATCCACCAATAAAGTGCTTGACTGACTATCTCAGAGC  476

seq1  TCCCAATACATACTCTGCTCTCTTCCAGTAGCTTTCAGCCCTCTGTCCTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATACATACTCTGCTCTCTTCCAGTAGCTTTCAGCCCTCTGTCCTC  526

seq1  CAGGGTTCCTAGCCTCAGTGCCTCTGAACCATCCTTGTCTGTTTCTTTGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTCCTAGCCTCAGTGCCTCTGAACCATCCTTGTCTGTTTCTTTGT  576

seq1  TTTCCTTTTCATTCTTTTCCTTCTGTTTTGATCACTTTTTGTAGCACTGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTTCATTCTTTTCCTTCTGTTTTGATCACTTTTTGTAGCACTGG  626

seq1  ATAGGAGGAGTCATGTTCATGTTCATGACAGTCTCTCAACAATAAGCCAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAGGAGTCATGTTCATGTTCATGACAGTCTCTCAACAATAAGCCAT  676

seq1  GTTACCCAACTTGAGGTCACAGTGCAGTCACTGGCCTAGGCCATCCATCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCCAACTTGAGGTCACAGTGCAGTCACTGGCCTAGGCCATCCATCA  726

seq1  CTAATCCTACTAAAATGGCCAAGTTAATAGTAAAAAAGTAGAGAGGGAGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCCTACTAAAATGGCCAAGTTAATAGTAAAAAAGTAGAGAGGGAGG  776

seq1  TTTGTACAATGTGACCACACTGGGCAGAGGAAAAAGTGATGGCAGCAATG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACAATGTGACCACACTGGGCAGAGGAAAAAGTGATGGCAGCAATG  826

seq1  CTCTCCAGCTAATCTTCTGTTCTGAAGTGAGACTAAAGTTTAAATAGAGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGCTAATCTTCTGTTCTGAAGTGAGACTAAAGTTTAAATAGAGG  876

seq1  CCCAGAGATATGAAAATCTAAGCCATTGACCCATCATTATCTGGGCTTCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGATATGAAAATCTAAGCCATTGACCCATCATTATCTGGGCTTCA  926

seq1  GTTTCATTCTGCAAAGCATTCTATTCTATCAAGTGGTGAAAACTGTGAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATTCTGCAAAGCATTCTATTCTATCAAGTGGTGAAAACTGTGAAA  976

seq1  TCTCTTTTATAGGAAACAAGGTTCTCTTCTGGCTACATCCAGGCTTCCAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTTATAGGAAACAAGGTTCTCTTCTGGCTACATCCAGGCTTCCAG  1026

seq1  GATTTTCCTTTTTCCAGCATGGAATTC  1075
      |||||||||||||||||||||||||||
seq2  GATTTTCCTTTTTCCAGCATGGAATTC  1053