BAC Information

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BAC

Clone NameB6Ng01-127A09
Chromosome13 (Build37)
Map Location 33,661,466 - 33,662,620
singlet/doubletsinglet
Overlap genenone
Upstream geneWrnip1, Serpinb1a, Serpinb1-ps1, Serpinb1c, Serpinb6b, Serpinb9, Serpinb9b, Serpinb1b, LOC628301, Serpinb9c, Serpinb9d, Serpinb9e, Serpinb9f, OTTMUSG00000000724, Serpinb9g, LOC100041370, EG619715
Downstream geneLOC382743, OTTMUSG00000000712, LOC193403, Vmn2r-ps94, OTTMUSG00000000720, Serpinb6c, Serpinb6a, Nqo2, 4930482L21Rik, Ripk1, Bphl, Tubb2a, LOC100042686, Tubb2b, 2310047M15Rik, 3110004L20Rik, LOC620132, EG666666
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127A09.bB6Ng01-127A09.g
ACCDH929248DH929249
length1,1661,145
definitionDH929248|Mus musculus domesticus DNA, BAC clone: B6Ng01-127A09, 5' end.DH929249|Mus musculus domesticus DNA, BAC clone: B6Ng01-127A09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaactgcaaatcagaacaaccctgagat
tccacctcacaccaaacagaatggctaagatcaaaaattcaggagacagc
agatgctggcgtggatgtgcagaaagaggaacgctcctccattgttggtt
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcttgggc
atatatccagaagatgccccaacttgtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtagtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagcgatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtttcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacaggcacccaa
tggaggagctagagaagtagccaagagctaaagggatctgcaaccctata
ggtggaacaacattatgactacagtacctcggagctcttgactctagctg
catatgtatcaaagatggctagtcagcatcactggaagagaggtcattgg
acatgcaaactttatatgccagtacagggaacgcaagggccaaagaaagg
gaggggtgggtggcag
gaattcagtgttggacagggtaggagaatttttctgggaactgctatctt
gttatggcagctgcatagtcattttgactactacatttctgaaattttct
tcagagggggaagtggtaggttgtcttgaatttgttttggattctacaac
accagtatccacttgggtaagcaagactgaaaagtggagatatggataca
gatgttacctgccatcaaaacaattactccctccatacctgcctgtctta
cacactaaataaagttctagtcaataaaaaggtttagactcacaaacagg
tatcctgttttagttaaaatgtaaaaaactctgtaaaacctggtaaaagt
gataactaggaataataaaaagcttgtttttgtaacaacatttgaattaa
gttaaatgctaaaacatttacaatttttagagtttaggacagaagtaaag
atgaattctaaaatagttctctccacatcttgtcctctgatctggcatct
ttttctttatcttagaattttccttgagtagccttttctcttttaactgt
catgcctacattaagatgtgtttattatagaacccagcctgaaaattcct
ttttagtctttgaaccagaaatttcagcttaacctgcatcaaggcctcct
cagcttggggtaagtcctcagaatgttaaaaacaaacaacaaagctgcat
ataatgaatgaagcattgctgatgagtctccctgtctgtcatttggatta
tcagttcaattaaacctgagctctgtgcccttagcttcactagtcttcca
ctccccaatccccttccttttcccctgccagatacatggtttctctgtgt
agccatggctaacctggactcactgtgtataccaggctgggccttgaact
cacagagagtctcctgactctacctgggataaagggggagtgccaccata
cacaatatattttttgaatactgcctggagagattagaacctagtgatat
caacctacatttcgatcgtgagtggtagtagaaacacattattttatgag
cggggaggtgtcattatttatagaaccagtacgttccatgtgtctgactt
atgggtacaagaattaaacaaggaaccttacagtgtgggagattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_33661466_33662620
seq2: B6Ng01-127A09.g_70_1214

seq1  GAATTCAGTGTTGGACAGGGTAGGAGAATTTTTCTGGGAACTGCTATCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGTTGGACAGGGTAGGAGAATTTTTCTGGGAACTGCTATCTT  50

seq1  GTTATGGCAGCTGCATAGTCATTTTGACTACTACATTTCTGAAATTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGGCAGCTGCATAGTCATTTTGACTACTACATTTCTGAAATTTTCT  100

seq1  TCAGAGGGGGAAGTGGTAGGTTGTCTTGAATTTGTTTTGGATTCTACAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGGGGAAGTGGTAGGTTGTCTTGAATTTGTTTTGGATTCTACAAC  150

seq1  ACCAGTATCCACTTGGGTAAGCAAGACTGAAAAGTGGAGATATGGATACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTATCCACTTGGGTAAGCAAGACTGAAAAGTGGAGATATGGATACA  200

seq1  GATGTTACCTGCCATCAAAACAATTACTCCCTCCATACCTGCCTGTCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTACCTGCCATCAAAACAATTACTCCCTCCATACCTGCCTGTCTTA  250

seq1  CACACTAAATAAAGTTCTAGTCAATAAAAAGGTTTAGACTCACAAACAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTAAATAAAGTTCTAGTCAATAAAAAGGTTTAGACTCACAAACAGG  300

seq1  TATCCTGTTTTAGTTAAAATGTAAAAAACTCTGTAAAACCTGGTAAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGTTTTAGTTAAAATGTAAAAAACTCTGTAAAACCTGGTAAAAGT  350

seq1  GATAACTAGGAATAATAAAAAGCTTGTTTTTGTAACAACATTTGAATTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACTAGGAATAATAAAAAGCTTGTTTTTGTAACAACATTTGAATTAA  400

seq1  GTTAAATGCTAAAACATTTACAATTTTTAGAGTTTAGGACAGAAGTAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAATGCTAAAACATTTACAATTTTTAGAGTTTAGGACAGAAGTAAAG  450

seq1  ATGAATTCTAAAATAGTTCTCTCCACATCTTGTCCTCTGATCTGGCATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTCTAAAATAGTTCTCTCCACATCTTGTCCTCTGATCTGGCATCT  500

seq1  TTTTCTTTATCTTAGAATTTTCCTTGAGTAGCCTTTTCTCTTTTAACTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTATCTTAGAATTTTCCTTGAGTAGCCTTTTCTCTTTTAACTGT  550

seq1  CATGCCTACATTAAGATGTGTTTATTATAGAACCCAGCCTGAAAATTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTACATTAAGATGTGTTTATTATAGAACCCAGCCTGAAAATTCCT  600

seq1  TTTTAGTCTTTGAACCAGAAATTTCAGCTTAACCTGCATCAAGGCCTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTCTTTGAACCAGAAATTTCAGCTTAACCTGCATCAAGGCCTCCT  650

seq1  CAGCTTGGGGTAAGTCCTCAGAATGTTAAAAACAAACAACAAAGCTGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTGGGGTAAGTCCTCAGAATGTTAAAAACAAACAACAAAGCTGCAT  700

seq1  ATAATGAATGAAGCATTGCTGATGAGTCTCCCTGTCTGTCATTTGGATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGAATGAAGCATTGCTGATGAGTCTCCCTGTCTGTCATTTGGATTA  750

seq1  TCAGTTCAATTAAACCTGAGCTCTGTGCCCTTAGCTTCACTAGTCTTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCAATTAAACCTGAGCTCTGTGCCCTTAGCTTCACTAGTCTTCCA  800

seq1  CTCCCCAATCCCCTTCCTTTTCCCCTGCCAGATACATGGTTTCTCTGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCAATCCCCTTCCTTTTCCCCTGCCAGATACATGGTTTCTCTGTGT  850

seq1  AGCCATGGCTAACCTGGAACTCACTGTGTATACCAGGCT-GGCCTTGAAC  899
      ||||||||||||||||| ||||||||||||||||||||| ||||||||||
seq2  AGCCATGGCTAACCTGG-ACTCACTGTGTATACCAGGCTGGGCCTTGAAC  899

seq1  TCACAGAGAGTCTCCTGACTCTACCTGGGATTAAAGGTGAGTGCCACCAT  949
      ||||||||||||||||||||||||||||||| || || ||||||||||||
seq2  TCACAGAGAGTCTCCTGACTCTACCTGGGATAAAGGGGGAGTGCCACCAT  949

seq1  ACACAATAATTATTTTTTGAATACTGCCTTGAGAAGATTAGAAACTAGTG  999
      ||||||||  ||||||||||||||||||| ||| ||||||||| ||||||
seq2  ACACAATA--TATTTTTTGAATACTGCCTGGAG-AGATTAGAACCTAGTG  996

seq1  ATATCAAACTTACA-TTCGATTCGTGAGTTGTATGTAGAAACACATAATT  1048
      ||||| ||| |||| ||||| |||||||| ||| |||||||||||| |||
seq2  ATATC-AACCTACATTTCGA-TCGTGAGTGGTA-GTAGAAACACATTATT  1043

seq1  TTATGAGCGGGGA-GTGTCTATTA-TTATAGAACCAAGTACGTCCCATGT  1096
      ||||||||||||| ||||| |||| |||||||||| ||||||| ||||||
seq2  TTATGAGCGGGGAGGTGTC-ATTATTTATAGAACC-AGTACGTTCCATGT  1091

seq1  GTCTGACCTATATGGCTATCAGAGAATTAAAACAAGGGACACTAACAGTG  1146
      |||||||   ||||| || || |||||| |||||||| || || ||||||
seq2  GTCTGAC--TTATGGGTA-CA-AGAATT-AAACAAGGAAC-CTTACAGTG  1135

seq1  TGGGA-ATTT  1155
      ||||| ||||
seq2  TGGGAGATTT  1145