BAC Information

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BAC

Clone NameB6Ng01-128J01
Chromosome13 (Build37)
Map Location 5,411,420 - 5,412,436
singlet/doubletsinglet
Overlap genenone
Upstream geneAkr1c6, Akr1c20, Akr1c21, Akr1e1, EG432721, EG432723
Downstream gene1700016G22Rik, Klf6, LOC100039388, LOC100039395
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128J01.bB6Ng01-128J01.g
ACCDH930383DH930384
length1,1681,013
definitionDH930383|Mus musculus domesticus DNA, BAC clone: B6Ng01-128J01, 5' end.DH930384|Mus musculus domesticus DNA, BAC clone: B6Ng01-128J01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaagatcagtcttcctttgttaaacacaaaggattaagtagttg
ggtgggtctcttccctgaaattaccatttctaccacacctgggcctcacc
tttatgtgtcccaggctgaccttgaattcaatctgcctgcctttgtatct
ttctgacaagctggctcctagtgcagctgcctttgttcctttagattcat
gaagcccctcataattcatattgcattcttatattttgcatagttgagaa
attatatattttcaaactccggtatctagagctctttcccatagccttaa
gggttgtcttgaaggtcccagacttcaccattttgctgagactttagcca
caccttcacctcctggtctcctgttggctgatcatcaaggagtcattaaa
attaacacagaggacatttcttggaggaatgtgaaatatgtaaattatta
cacaaacaagccttatgcccacagtgcccatctagattccaggaggctta
taccggggcgctgtcctggggcaggaacgatgtcaccatgtcactttgtc
cccaccagggccatgctggactctgcaccttgtggtccatgtgtgtatgc
taatactgtgcggaaaatgtccaccatagctttagtcctgcgaatatttt
cagcctgaagaccgctcctctacagagatcgctactactgagcttaggta
aacctctctcctcatgtcagctggacaccatcaactctgcctcattactt
ttctgtacagaaataaatctatcaccttgatcagttgtatgcagtcaact
ggttgtcttactgttctactttacacatgctgtgcttgtggggtatgggg
gtttctcagagagcctgctctataggatcccaggcttctgttcaaacacc
tgtcttctctcatttcttcattaccacaatcaggttcgtacttgggagtc
atacacagaagcagcacttggtctttgaatttcaacaatcatagtgtagt
gctgtctcactagaatattaataacaagagctcaggagtcaatgggtata
ggcaccttgaaacacatctggctgagtttgcagtatttgggcctggttag
tctgggagggggtttcgtttactttggagggtcctaggcctggactcata
gaactgggaagttcacag
gaattccatgttgttttaaaaaaaattgtctaacacattgcagtctgggc
caaatttttatcccattagatcactgtgtaatgtttaagcttgtgtccct
gcttcctaaactgttctgggaatcaccagaacattcactctaggagcaac
agcactaacaaacaagcctcctcaatgcatcccaggacatcccatgctcc
ccatcaaccaaatcttgattctttgctttcactgtctggtacatggggca
tctgtgagttgacaatggtcatcagcaactgataccagctgacacaatcc
ctctgtcctgttttaactcaggaggaaaataacttatcacacacacagcc
aagagaattgttaatcttagcattttaagaaacagtattaagctggtatg
ggagagatatgtctgtctggaatgctgatccattgtgaaagacatagtgg
tctctttgtaagaccagggtacagtccagtgggaaaaggtttcagatttc
aagtcaagatcccacaacattaaaattttaaggccaacttgggctacagg
actccttatctcaacagcaatccctccctgaaaaataaatgaatacataa
aataagctaatatctgaggctcaatgaaaagtcaaagagctagcagttgg
tagcagtttacatcactgcaactatcctgagtgacttatacaaaactgta
tttaattttcacctcactgtaattattcccttgtctcagagaggaagcct
ggatcattagaagttaaaaatctaagactacgttgaatgggcagctaggt
gtctgatcacttagacttgggtagtcattctagttccattttccttaaag
taagaagtgtgggttaagaaatctttacattttcagcttgttgacctttt
tgaactttgtggacaactgaagtgcccaattgagatgcctcagtcccact
tggagagagaagaagcatcacaagtggaaagggagggagggactggggtt
gagggggggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_5411420_5412436
seq2: B6Ng01-128J01.g_66_1078

seq1  GAATTCCATGTTGTTTTAAAAAAAATTGTCTAACACATTGCAGTCTGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTTGTTTTAAAAAAAATTGTCTAACACATTGCAGTCTGGGC  50

seq1  CAAATTTTTATCCCATTAGATCACTGTGTAATGTTTAAGCTTGTGTCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTTTATCCCATTAGATCACTGTGTAATGTTTAAGCTTGTGTCCCT  100

seq1  GCTTCCTAAACTGTTCTGGGAATCACCAGAACATTCACTCTAGGAGCAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTAAACTGTTCTGGGAATCACCAGAACATTCACTCTAGGAGCAAC  150

seq1  AGCACTAACAAACAAGCCTCCTCAATGCATCCCAGGACATCCCATGCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTAACAAACAAGCCTCCTCAATGCATCCCAGGACATCCCATGCTCC  200

seq1  CCATCAACCAAATCTTGATTCTTTGCTTTCACTGTCTGGTACATGGGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAACCAAATCTTGATTCTTTGCTTTCACTGTCTGGTACATGGGGCA  250

seq1  TCTGTGAGTTGACAATGGTCATCAGCAACTGATACCAGCTGACACAATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGAGTTGACAATGGTCATCAGCAACTGATACCAGCTGACACAATCC  300

seq1  CTCTGTCCTGTTTTAACTCAGGAGGAAAATAACTTATCACACACACAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCCTGTTTTAACTCAGGAGGAAAATAACTTATCACACACACAGCC  350

seq1  AAGAGAATTGTTAATCTTAGCATTTTAAGAAACAGTATTAAGCTGGTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAATTGTTAATCTTAGCATTTTAAGAAACAGTATTAAGCTGGTATG  400

seq1  GGAGAGATATGTCTGTCTGGAATGCTGATCCATTGTGAAAGACATAGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGATATGTCTGTCTGGAATGCTGATCCATTGTGAAAGACATAGTGG  450

seq1  TCTCTTTGTAAGACCAGGGTACAGTCCAGTGGGAAAAGGTTTCAGATTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTGTAAGACCAGGGTACAGTCCAGTGGGAAAAGGTTTCAGATTTC  500

seq1  AAGTCAAGATCCCACAACATTAAAATTTTAAGGCCAACTTGGGCTACAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAAGATCCCACAACATTAAAATTTTAAGGCCAACTTGGGCTACAGG  550

seq1  ACTCCTTATCTCAACAGCAATCCCTCCCTGAAAAATAAATGAATACATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTTATCTCAACAGCAATCCCTCCCTGAAAAATAAATGAATACATAA  600

seq1  AATAAGCTAATATCTGAGGCTCAATGAAAAGTCAAAGAGCTAGCAGTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGCTAATATCTGAGGCTCAATGAAAAGTCAAAGAGCTAGCAGTTGG  650

seq1  TAGCAGTTTACATCACTGCAACTATCCTGAGTGACTTATACAAAACTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTTTACATCACTGCAACTATCCTGAGTGACTTATACAAAACTGTA  700

seq1  TTTAATTTTCACCTCACTGTAATTATTCCCTTGTCTCAGAGAGGAAGCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTTCACCTCACTGTAATTATTCCCTTGTCTCAGAGAGGAAGCCT  750

seq1  GGATCATTAGAAGTTAAAAATCTAAGACTACGTTGAATGGGCAGCTAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCATTAGAAGTTAAAAATCTAAGACTACGTTGAATGGGCAGCTAGGT  800

seq1  GTCTGATCACTTAGACTTGGGTAGTCATTCTAGTTCCATTTTCCTTAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGATCACTTAGACTTGGGTAGTCATTCTAGTTCCATTTTCCTTAAAG  850

seq1  TAAGAAGTGTGGGTTAAGAAATCTTTACATTTTCAGCTTGTTGACCTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGTGTGGGTTAAGAAATCTTTACATTTTCAGCTTGTTGACCTTTT  900

seq1  TGAACTTTGTGGACAAACTGAAGTGCCCAATTGAGGATGCCTCAGTCCCA  950
      |||||||||||||| ||||||||||||||||||| |||||||||||||||
seq2  TGAACTTTGTGGAC-AACTGAAGTGCCCAATTGA-GATGCCTCAGTCCCA  948

seq1  CTTGGGAGAGAGAAGAAAGCAATCACAAGTGGAAAGGGAGGGAGGGACCT  1000
      ||| ||||||||||| |||| |||||||||||||||||||||||||||  
seq2  CTT-GGAGAGAGAAG-AAGC-ATCACAAGTGGAAAGGGAGGGAGGGACTG  995

seq1  GGGGTGA-GGGGAGTGGG  1017
      ||| ||| |||| |||||
seq2  GGGTTGAGGGGGGGTGGG  1013