BAC Information

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BAC

Clone NameB6Ng01-129J02
Chromosome13 (Build37)
Map Location 37,068,731 - 37,069,695
singlet/doubletsinglet
Overlap geneF13a1
Upstream geneLyrm4, LOC100042773, Fars2, LOC100041590, LOC666758, Nrn1
Downstream geneLy86, LOC100042794, LOC100042800, LOC100042802, LOC100041624, Rreb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129J02.bB6Ng01-129J02.g
ACCDH931116DH931117
length1,174961
definitionDH931116|Mus musculus domesticus DNA, BAC clone: B6Ng01-129J02, 5' end.DH931117|Mus musculus domesticus DNA, BAC clone: B6Ng01-129J02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaaacagaacactgttagcacaggcacgcacacacacacacac
acacacacacacacacacacacacacacacacaaaatcaacaattaataa
ataggaccttgtagaactgaaaagcttctgtaaggcaagtgggaaaagat
ttttaccaatctcatatctgatagagcactaatatttcaaatgtataaag
aattcaaggaactagatttcaagaaaccaaataatctacaattttaaaaa
tggggtacaggtctaaacagagaattgctaatagagaataatactcaaac
ggctgagggacaaagaaacattcaacatcctcatcaatcaaggaattgca
aatcaaaactactttgagattctatcttatacctgtcagggtagtgaaga
tcaataacacaagtgacagcccatgctggagaggatgtggaacaagggag
atattcataacattgctggtgggattgcaaacgcaaacaaccactatgga
aataagtatggtggttcctcagaaagatgaaagttgatctacatcaagat
tgagctatatatcacccttgggcatatgcccaaagaatacttcatcctac
cacaaggacacttgctcaaccatgtctgctgctgtcctttatataatagc
tagaaattggaaacaatctagatgttctagaagagtggataaagaaaatg
tggtacatttatacagtagagtattgctcagctgttttcttttaaaaaaa
tgacatcctgaaaatcaaaggcaagtggatgacccaaagtgagatcagtc
agttacagaaagagaaagatggtatatatttgctcatatgcagatattag
ccatttaactaaatgataaccaagctacaacccataaactcaaagaggtt
aggtatagaagaagagactagaggaaatgtatagattttttttaggaggg
aaaaataaaataaattttatgagtggactggcacagtttaagcagaaaat
agggagagggagagatatgggaatgaaggaggtatttgatgaagagacgc
ttagaatttgtgaagatttgaaagaagattcaaatttagttgtatagacc
ctctaaaacacattgtagcgtatcttagagtttctattataagggtgagg
gatgtcaaatgccatactcaggtt
gaattcagccaacactcagactttagaagcctgaatgttgattcaaaaat
ttgactgaaacaaagaatttgtaaaattttcctggagtaattttttttta
agaagaaagagaagatggaagcttccttctgactttggttaactttggtt
tatggggatttagcagaagtgtaacaagaaaggcattgttgcatgtagcc
tgtgacatcatacctttcttgttttctttagagaaatgtagtctggcaaa
tatgctggtctaacaatgagtatcttcatagctgtgcaagaagaggagtg
tctctcatgtgaagtaggattaactggtttagaggcctcatctatatgag
cccaatatgaacactttgagaacaaatgttcatctatgcatgccataggt
ttcctggttctaaattacagagtcttactgtgaacacaattaactaaggc
agtgttacaattaaaattagtattggcatggcaacatataacacctaggt
gtgcattggatcttaatatgtagagagatggtttttaaaacctttgagca
atgattgacctgatcactacatgttgttgtgactactgcttgtctacatg
ggaaagaagtttctgtgacatctcattcacctgtgacatgaaagcatatc
gacaggtttaagatatgcacgtgtctcttcctaacagttctttagcttcc
tcaacatggtccaggtaataccacatacagaagcaaaatccacattaagt
gtatgccaagatgttcaacttccctaataatcagagaaatgcaagctaaa
ataacagtaaaataatcatgatttcccactgtatcatcaaacattaatta
aaaaggtaacacccaacattaataaggttaaaagaaatgaatatagctca
tattttgtctccactaaatgattgccttttattaggggttgttatatttt
taaatggcggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_37068731_37069695
seq2: B6Ng01-129J02.g_67_1027

seq1  GAATTCAGCCAACACTCAGACTTTAGAAGCCTGAATGTTGATTCAAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCAACACTCAGACTTTAGAAGCCTGAATGTTGATTCAAAAAT  50

seq1  TTGACTGAAACAAAGAATTTGTAAAATTTTCCTGGAGTAATTTTTTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTGAAACAAAGAATTTGTAAAATTTTCCTGGAGTAATTTTTTTTTA  100

seq1  AGAAGAAAGAGAAGATGGAAGCTTCCTTCTGACTTTGGTTAACTTTGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAGAGAAGATGGAAGCTTCCTTCTGACTTTGGTTAACTTTGGTT  150

seq1  TATGGGGATTTAGCAGAAGTGTAACAAGAAAGGCATTGTTGCATGTAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGGATTTAGCAGAAGTGTAACAAGAAAGGCATTGTTGCATGTAGCC  200

seq1  TGTGACATCATACCTTTCTTGTTTTCTTTAGAGAAATGTAGTCTGGCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACATCATACCTTTCTTGTTTTCTTTAGAGAAATGTAGTCTGGCAAA  250

seq1  TATGCTGGTCTAACAATGAGTATCTTCATAGCTGTGCAAGAAGAGGAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTGGTCTAACAATGAGTATCTTCATAGCTGTGCAAGAAGAGGAGTG  300

seq1  TCTCTCATGTGAAGTAGGATTAACTGGTTTAGAGGCCTCATCTATATGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCATGTGAAGTAGGATTAACTGGTTTAGAGGCCTCATCTATATGAG  350

seq1  CCCAATATGAACACTTTGAGAACAAATGTTCATCTATGCATGCCATAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATATGAACACTTTGAGAACAAATGTTCATCTATGCATGCCATAGGT  400

seq1  TTCCTGGTTCTAAATTACAGAGTCTTACTGTGAACACAATTAACTAAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGTTCTAAATTACAGAGTCTTACTGTGAACACAATTAACTAAGGC  450

seq1  AGTGTTACAATTAAAATTAGTATTGGCATGGCAACATATAACACCTAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTACAATTAAAATTAGTATTGGCATGGCAACATATAACACCTAGGT  500

seq1  GTGCATTGGATCTTAATATGTAGAGAGATGGTTTTTAAAACCTTTGAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATTGGATCTTAATATGTAGAGAGATGGTTTTTAAAACCTTTGAGCA  550

seq1  ATGATTGACCTGATCACTACATGTTGTTGTGACTACTGCTTGTCTACATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTGACCTGATCACTACATGTTGTTGTGACTACTGCTTGTCTACATG  600

seq1  GGAAAGAAGTTTCTGTGACATCTCATTCACCTGTGACATGAAAGCATATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAAGTTTCTGTGACATCTCATTCACCTGTGACATGAAAGCATATC  650

seq1  GACAGGTTTAAGATATGCACGTGTCTCTTCCTAACAGTTC-TTAGCTTCC  699
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GACAGGTTTAAGATATGCACGTGTCTCTTCCTAACAGTTCTTTAGCTTCC  700

seq1  TCAACATGGTCCAGGTAATACCACATACAGAAGCAAAATCCACATTAAGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATGGTCCAGGTAATACCACATACAGAAGCAAAATCCACATTAAGT  750

seq1  GTATGCCAAGATGTTCAACTTCCCTAATAATCAGAGAAATGCAAGCTAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCCAAGATGTTCAACTTCCCTAATAATCAGAGAAATGCAAGCTAAA  800

seq1  ATAACAGTAAAATAATCATGATTTCCCACTGTATCATCAAACATTTAATT  849
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATAACAGTAAAATAATCATGATTTCCCACTGTATCATCAAACA-TTAATT  849

seq1  AAAAAGGTAACACCCAACAATAATAAGGGTAAAAAGAAATGAATATTAGC  899
      ||||||||||||||||||| |||||| ||| |||||||||||||| ||||
seq2  AAAAAGGTAACACCCAACATTAATAA-GGTTAAAAGAAATGAATA-TAGC  897

seq1  TCATATTTTGTCTACACTAAATGA-TGCCTTTTATTAAGGGGTTGTTTAT  948
      ||||||||||||| |||||||||| ||||||||||| |||||||| ||||
seq2  TCATATTTTGTCTCCACTAAATGATTGCCTTTTATT-AGGGGTTG-TTAT  945

seq1  ATTTTAAATTGGGCGGT  965
      ||||| || | ||||||
seq2  ATTTTTAAAT-GGCGGT  961