BAC Information

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BAC

Clone NameB6Ng01-130B24
Chromosome13 (Build37)
Map Location 5,111,926 - 5,112,793
singlet/doubletsinglet
Overlap genenone
Upstream geneAkr1c18, LOC100039262, Akr1c13, Akr1c19, Akr1c12, Akr1c6, Akr1c20, Akr1c21, Akr1e1, EG432721, EG432723
Downstream gene1700016G22Rik, Klf6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130B24.bB6Ng01-130B24.g
ACCDH931519DH931520
length8951,036
definitionDH931519|Mus musculus domesticus DNA, BAC clone: B6Ng01-130B24, 5' end.DH931520|Mus musculus domesticus DNA, BAC clone: B6Ng01-130B24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaactgaggaataccgcatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaaacaaaacaaccttgagat
tctatctcacaccagtcagaatggctaagatcaaaagaaattcaggtgac
ttaagcagagacttatactgattgttttatctgcctgtggacactgtcct
cctaactgggctgttttggctgggctcaggaggaaaggatatacctggtc
ctgcagtgacttgtggtgttagagtgggttgatacccagggagaacctca
cccttctcagagaaaaaggagagagtgcgagggggaagtagccatgcgaa
ggaggccttgagggaagggatgagattgtcattttttattagatattttc
ttcatttacatttcaaatgctatcccaaagatcccctatactctcccccc
accctgattgtcatttaatgtgaataaatataataattaataggaacaaa
attttaaattaaaacataattattttcttgatatgctttatttgttttat
gtacttgtctatattacgaaacaacttaacacatcttaaaagtaacatgg
aatccttatttgtctttctgactggaaaattatcactgtggaaatgggct
taactggtgtttattaccttgtaacatgctcaggtttgtgatataactat
gacacatctaaaaagaatcatgagaaaacatgagctaaaatacacattga
gaatatgtatcaaaatagttaaagactattctaacatatcaataataaca
aaatgactcaaacaatgttctaaattaaggaaaattagacaggccaggga
acctcatgaaatcaatcagtttaattggtggtggtggtggtggtg
gaattcatacagttgaatccttcttaacagtctgctttacgggaaccttt
attaccgcgacccgcagttctggttctggaatgagggatcttccttgcgc
cagtcccgagttttttctcgtcccggaattcggcaccaattgttattaga
cgcattctcacgaccggccaggaagaacaccacagaccagaatcttctgc
ggcaaagctttattcttacatcttcaggagccagggtgcaggaagcaaga
gagcaagaagcaagagagagagaaaaacgaaaccccgtccctcttaagga
gcattctccttcgcctcggacgtgtcactccctgattggctgcagcccat
cggccgagttgacgtcacggggaaggcagagcacaagtagtcataagata
cccttggcacatgcgcagattatttgtttaccacttagaacacagctgtc
agcgccatcttgtaacggcgaatgtgggcgcggctcccaacagattcaca
tcattaaactggtgttatggtttcagttggctcccaaggaccaagtgtta
tcaatttttcttaaatatattttattaatccttgagaatatcataaattc
atataacgcactttgatcacatttatctccccatcactcctctcagatcc
agtaaccatcttcccattatttcctaacttcatcttctttcctttgcttt
aaaataattacacaatcccaatttgtgccacacatatacactgcatgtga
gcattcactggtggatggtcaaaccccccatgttccacatctaagaaaat
tgaagcctcttcatcaccggaagccagaactgtagaagctcttcagttag
gtgataaggagcacttgagaagtctatcacttccatgttagaaggattac
tggcttgatcgtggtacacactccctggagagcaacccacagttttgtat
gtgcctcatgaatacagtgaacgctgtccatgtcctgaaactctttaatt
tgaagacctctctttggagatttggatggggagctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_5111926_5112793
seq2: B6Ng01-130B24.b_72_939

seq1  GCTGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAAT  50

seq1  GCAAAACAAAACAACCTTGAGATTCTATCTCACACCAGTCAGAATGGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAACAAAACAACCTTGAGATTCTATCTCACACCAGTCAGAATGGCTA  100

seq1  AGATCAAAAGAAATTCAGGTGACTTAAGCAGAGACTTATACTGATTGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAAAAGAAATTCAGGTGACTTAAGCAGAGACTTATACTGATTGTTT  150

seq1  TATCTGCCTGTGGACACTGTCCTCCTAACTGGGCTGTTTTGGCTGGGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGCCTGTGGACACTGTCCTCCTAACTGGGCTGTTTTGGCTGGGCTC  200

seq1  AGGAGGAAAGGATATACCTGGTCCTGCAGTGACTTGTGGTGTTAGAGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAAAGGATATACCTGGTCCTGCAGTGACTTGTGGTGTTAGAGTGG  250

seq1  GTTGATACCCAGGGAGAACCTCACCCTTCTCAGAGAAAAAGGAGAGAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATACCCAGGGAGAACCTCACCCTTCTCAGAGAAAAAGGAGAGAGTG  300

seq1  CGAGGGGGAAGTAGCCATGCGAAGGAGGCCTTGAGGGAAGGGATGAGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGGGGAAGTAGCCATGCGAAGGAGGCCTTGAGGGAAGGGATGAGATT  350

seq1  GTCATTTTTTATTAGATATTTTCTTCATTTACATTTCAAATGCTATCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTTTTATTAGATATTTTCTTCATTTACATTTCAAATGCTATCCCA  400

seq1  AAGATCCCCTATACTCTCCCCCCACCCTGATTGTCATTTAATGTGAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCCCCTATACTCTCCCCCCACCCTGATTGTCATTTAATGTGAATAA  450

seq1  ATATAATAATTAATAGGAACAAAATTTTAAATTAAAACATAATTATTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATAATTAATAGGAACAAAATTTTAAATTAAAACATAATTATTTTC  500

seq1  TTGATATGCTTTATTTGTTTTATGTACTTGTCTATATTACGAAACAACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATATGCTTTATTTGTTTTATGTACTTGTCTATATTACGAAACAACTT  550

seq1  AACACATCTTAAAAGTAACATGGAATCCTTATTTGTCTTTCTGACTGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATCTTAAAAGTAACATGGAATCCTTATTTGTCTTTCTGACTGGAA  600

seq1  AATTATCACTGTGGAAATGGGCTTAACTGGTGTTTATTACCTTGTAACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCACTGTGGAAATGGGCTTAACTGGTGTTTATTACCTTGTAACAT  650

seq1  GCTCAGGTTTGTGATATAACTATGACACATCTAAAAAGAATCATGAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGTTTGTGATATAACTATGACACATCTAAAAAGAATCATGAGAAA  700

seq1  ACATGAGCTAAAATACACATTGAGAATATGTATCAAAATAGTTAAAGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGCTAAAATACACATTGAGAATATGTATCAAAATAGTTAAAGACT  750

seq1  ATTCTAACATATCAATAATAACAAAATGACTCAAACAATGTTCTAAATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAACATATCAATAATAACAAAATGACTCAAACAATGTTCTAAATTA  800

seq1  AGGAAAATTAGACAGGCCAGGGAACCTCATGAAATCAATCAGTTTAATTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAATTAGACAGGCCAGGGAACCTCATGAAATCAATCAGTTTAATTG  850

seq1  GTGGTGGTGGTGGTGGTG  868
      ||||||||||||||||||
seq2  GTGGTGGTGGTGGTGGTG  868