BAC Information

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BAC

Clone NameB6Ng01-130F21
Chromosome13 (Build37)
Map Location 21,097,014 - 21,097,947
singlet/doubletsinglet
Overlap geneAoah
Upstream geneElmo1, LOC100040226, LOC665381, LOC665386
Downstream geneOlfr1370, Olfr1369-ps1, Olfr42, Olfr1368, Trim27, Gpx5, LOC625752, Gpx6, Olfr1367, Zfp96, LOC665454, Zkscan3, Pgbd1, 4930470G03Rik, Zfp187, 4921504I05Rik, OTTMUSG00000000421, AK157302, LOC100040340, Zfp192, Olfr1366, Olfr1365, Olfr1364, Olfr1362, Olfr1363-ps1, Olfr11, Olfr1361, Olfr1360, Olfr1359, Hist1h2bl, Hist1h2ai, Hist1h3h, Hist1h2aj, Hist1h2bm, Hist1h4j, Hist1h4k, Hist1h2ak, Hist1h2bn, LOC100041150, Hist1h1b, Hist1h3i, Hist1h2an, Hist1h2bp, LOC665596, Rp23-480b19.10, LOC100041230, Hist1h4m, Hist1h2ao, LOC665622, LOC665634, Zfp184, Gm24, Prss16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130F21.bB6Ng01-130F21.g
ACCDH931699DH931700
length1,155937
definitionDH931699|Mus musculus domesticus DNA, BAC clone: B6Ng01-130F21, 5' end.DH931700|Mus musculus domesticus DNA, BAC clone: B6Ng01-130F21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgcccgggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaggagctaaaggatctcaccctata
gtggacacatatgaactaccagtacccctgagctcttgactctagctgca
atgtatcaaagaatggcctagtcgcatcactgaaagaaagccattgacac
gctgactttgggtgctcgttacagggaacgccaggcaacgtgaagtgctg
ggtag
gaattcattaataagtctttaactctgcattttaatgagaggctatttat
caaaaatgtctctccccatgagagagatgtgtgtcatgtaggcaggagat
ctggtaaaggcagatcagtcttgttgaaaggatgttcagagctaaagtat
cagagtctgtaatgcaaaatgtgtcagctaatgtaatattcaataattca
tgatggccatctgccccattccagatgcctgggctgggggaggggggctg
ggagcgatgtaccgagatgaggagtattccctctgctgcacacactgaag
catttcattagcatcatctcgctggcagtcaggcaacatgggtttttctc
atggagaaaaatggcttaacaatgaaaatgaatcttgggagggttacaat
caataactagggttttcttttagagagtcaagatgtaaaggataaatcag
cggctctggttagcaagcctgagtttgtacggctacttgtcagtgactct
aaaagaaaaaaaaaatttttttttcccagagagttgggacgtgggtttac
ttttcaaatagcatttctttacattttgcccctccctaagagatttcagt
tagttacaggtctaggcctgttcaaggtagtccagcactccaccagagga
ggcatggccctactcctccctttggtcacctttagtttttaatacataca
tagaaataaggcatcgctaatctggccaagaactgttgggtgctcccaac
agttgcttcagagacttttcagagatggtgaagtgaggaggtgacgttaa
gtctcaacttgtttttgcctttgctcaatgctgagagttatgtcagagag
ttaggggtgaacctccctagtctgtccagtggtgctttgtaacataaccc
cccactgcagctgctgtgcttgcctacttgtcaagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_21097014_21097947
seq2: B6Ng01-130F21.g_69_1005 (reverse)

seq1  GTCTTGAC-AGTAGGCAAGCACAGCAGCTGCAGTGGGGGGCTATGTTACA  49
      |||||||| ||||||||||||||||||||||||||||||| |||||||||
seq2  GTCTTGACAAGTAGGCAAGCACAGCAGCTGCAGTGGGGGGTTATGTTACA  50

seq1  AAGCA-CACTGGACAGACTAGGGAGGTTCACCCCTAACTCTCTGACATAA  98
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACCACTGGACAGACTAGGGAGGTTCACCCCTAACTCTCTGACATAA  100

seq1  CTCTCAGCATTGAGCAAAGGCAAAAACAAGTTGAGACTTAACGTCACCTC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGCATTGAGCAAAGGCAAAAACAAGTTGAGACTTAACGTCACCTC  150

seq1  CTCACTTCACCATCTCTGAAAAGTCTCTGAAGCAACTGTTGGGAGCACCC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTCACCATCTCTGAAAAGTCTCTGAAGCAACTGTTGGGAGCACCC  200

seq1  AACAGTTCTT-GCCAGATTAGCGATGCCTTATTTCTATGTATGTATTAAA  247
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTCTTGGCCAGATTAGCGATGCCTTATTTCTATGTATGTATTAAA  250

seq1  AACTAAAGGTGACCAAAGGGAGGAGTAGGGCCATGCCTCCTCTGGTGGAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAAGGTGACCAAAGGGAGGAGTAGGGCCATGCCTCCTCTGGTGGAG  300

seq1  TGCTGGACTACCTTGAACAGGCCTAGACCTGTAACTAACTGAAATCTCTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGACTACCTTGAACAGGCCTAGACCTGTAACTAACTGAAATCTCTT  350

seq1  AGGGAGGGGCAAAATGTAAAGAAATGCTATTTGAAAAGTAAACCCACGTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGGGCAAAATGTAAAGAAATGCTATTTGAAAAGTAAACCCACGTC  400

seq1  CCAACTCTCTGGGAAAAAAAAATTTTTTTTTTCTTTTAGAGTCACTGACA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTCTCTGGGAAAAAAAAATTTTTTTTTTCTTTTAGAGTCACTGACA  450

seq1  AGTAGCCGTACAAACTCAGGCTTGCTAACCAGAGCCGCTGATTTATCCTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCCGTACAAACTCAGGCTTGCTAACCAGAGCCGCTGATTTATCCTT  500

seq1  TACATCTTGACTCTCTAAAAGAAAACCCTAGTTATTGATTGTAACCCTCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCTTGACTCTCTAAAAGAAAACCCTAGTTATTGATTGTAACCCTCC  550

seq1  CAAGATTCATTTTCATTGTTAAGCCATTTTTCTCCATGAGAAAAACCCAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATTCATTTTCATTGTTAAGCCATTTTTCTCCATGAGAAAAACCCAT  600

seq1  GTTGCCTGACTGCCAGCGAGATGATGCTAATGAAATGCTTCAGTGTGTGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCTGACTGCCAGCGAGATGATGCTAATGAAATGCTTCAGTGTGTGC  650

seq1  AGCAGAGGGAATACTCCTCATCTCGGTACATCGCTCCCAGCCCCCCTCCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGGGAATACTCCTCATCTCGGTACATCGCTCCCAGCCCCCCTCCC  700

seq1  CCAGCCCAGGCATCTGGAATGGGGCAGATGGCCATCATGAATTATTGAAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCAGGCATCTGGAATGGGGCAGATGGCCATCATGAATTATTGAAT  750

seq1  ATTACATTAGCTGACACATTTTGCATTACAGACTCTGATACTTTAGCTCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATTAGCTGACACATTTTGCATTACAGACTCTGATACTTTAGCTCT  800

seq1  GAACATCCTTTCAACAAGACTGATCTGCCTTTACCAGATCTCCTGCCTAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATCCTTTCAACAAGACTGATCTGCCTTTACCAGATCTCCTGCCTAC  850

seq1  ATGACACACATCTCTCTCATGGGGAGAGACATTTTTGATAAATAGCCTCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACACACATCTCTCTCATGGGGAGAGACATTTTTGATAAATAGCCTCT  900

seq1  CATTAAAATGCAGAGTTAAAGACTTATTAATGAATTC  934
      |||||||||||||||||||||||||||||||||||||
seq2  CATTAAAATGCAGAGTTAAAGACTTATTAATGAATTC  937