BAC Information

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BAC

Clone NameB6Ng01-131C01
Chromosome13 (Build37)
Map Location 4,001,632 - 4,002,166
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667375, LOC544917, LOC236294, Speer6-ps1, LOC674228, LOC667411, LOC100039182, 2810429I04Rik, Gdi2, Asb13, Calml3, Calm4, Calm5, LOC100039279, Net1, Tubal3, Ucn3
Downstream geneAkr1c14, Akr1c18, LOC100039262, Akr1c13, Akr1c19, Akr1c12, Akr1c6, Akr1c20, Akr1c21, Akr1e1, EG432721, EG432723
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131C01.bB6Ng01-131C01.g
ACCDH932265DH932266
length1,0341,252
definitionDH932265|Mus musculus domesticus DNA, BAC clone: B6Ng01-131C01, 5' end.DH932266|Mus musculus domesticus DNA, BAC clone: B6Ng01-131C01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatgtcaatgcagtgttcctaaatttcctttaagataaaaacaa
aaaatattgttttgatgttggacaagccaagccaacaggatattaaaaga
gccttaaggaaaggcacaagggtcagagacccactcagtgatattcaagt
gtcctaaactgaaagctataatatgccctggtacagacctgtgcaggccc
cgtgctttctgcttcagtctctgtgagcttctacaatctctgctcagttt
tttgtttttttgttttttttttttgtttttttttgttttttgtttttaga
gggccttgctctggtattccccatcccctctgtctccccagctccttctg
cctcctcttctacaagtttctctgaactctgacaggtgggatttaatgga
ggacattctcatttagagatgtgtgtttcaaggtcgtacagccacttggc
tgtgggtctgtgtatttgttcccatctgaagcaggatggtaatgatgatg
ataaggaaccaatttatgagtagagaagactatcattagtgtttatttat
ttatttatttatttatttatttatttatagattagtattatttggtttta
tcctaggtccctgggctcaggttcttggtcatccaagcagtgtcatgtat
ggtttccatctcatggcatgagtcttaagtcagatcacacactggttggt
cactctcacaagatttgagtcatcattgcgctagagtattttgtaggcag
gtcagattttagattaaatgatttgtgcctgggttggtgtttacttttct
cttttggagcctacagagtaactttccatgtgatagacaatggaacatgt
gggtgaaaggttctatgtaaatagcagttcaacctctccatgttcagtga
gttgtgtggctgttgtcttcaataatagggtctatgtcttataaaagagt
ctggatttggggggatttccatgggactctttcagcaagcattcaattgg
atgaaaccttgtgtcagtactagagcttctttag
gaattcagtaggaattcagcaaggaagttacctattcagtaactaattaa
gcattacagaagatggagccaacatcttatgactagtctgcaaagtattt
actaggacagaaaggacagtcttaactaaataagggtttaccatgagaaa
agttagggaatcccacgaagacaggtttcttcactaggccctaagaattc
aggcagatctatagagcataaataaattttatgcctcagtccagcctttc
ttttttatattaataacagggaggagatataacctccccccccccccaca
gcctgaagtaggctgagccaggcttgacttgttgtcactaggagatacct
ggggtggagcctgcctccctggttcaccctattgttctgccactgctgct
gctgctacctgctgcctagctgttctggagcctacacgtgctcacctgca
gctggactccgaggatgattcggtgggaacgggcgccccccttctttata
aggagtgttccctgattgccgcagaccctctgggctcctttgtctgcgtg
aaaagagtttctcgagcagatggacaaagagttggatggagtgacaaaca
gatatacgcacacaagagaggtgttggatctgaatgtaatattctggtcg
agcttcagacttatattacaacgaattatcagaagatacaaatcacaaaa
agacaagatacactaaaattcaccagttacagcagaaaggaatttgcaag
gactaattaaatgtttacattagggataacaagccctgcctaggatcagc
ctaatgccaggcaagaatttcacactttagggttaatagcatcaggggtt
gttaactcttgacaggcctcaagataatgtatgttactgaccctgaattc
tctaggcttgttattcttatctagtttggagattcccattatcaggatag
tatatcacttgctctgatgtggaacatagtttatagtaaatatttctatc
tcagtgagactttagtctcttcttgcagacagctgattatggctagggct
tatgtttatatggaggctaataagtacggaatgggtaagctctgctacat
tctggaatttgacctgaaaggcttagcttggtgaatcaactttaatgctt
acataagtatcggttgaaggcagtgtactactagctacggactggaacgt
atatttatgtgggtgtggcaggatatgcacgtccatctctcaggagggga
ct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_4001632_4002166
seq2: B6Ng01-131C01.b_44_578

seq1  GAATTCTATGTCAATGCAGTGTTCCTAAATTTCCTTTAAGATAAAAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGTCAATGCAGTGTTCCTAAATTTCCTTTAAGATAAAAACAA  50

seq1  AAAATATTGTTTTGATGTTGGACAAGCCAAGCCAACAGGATATTAAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTGTTTTGATGTTGGACAAGCCAAGCCAACAGGATATTAAAAGA  100

seq1  GCCTTAAGGAAAGGCACAAGGGTCAGAGACCCACTCAGTGATATTCAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTAAGGAAAGGCACAAGGGTCAGAGACCCACTCAGTGATATTCAAGT  150

seq1  GTCCTAAACTGAAAGCTATAATATGCCCTGGTACAGACCTGTGCAGGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAAACTGAAAGCTATAATATGCCCTGGTACAGACCTGTGCAGGCCC  200

seq1  CGTGCTTTCTGCTTCAGTCTCTGTGAGCTTCTACAATCTCTGCTCAGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCTTTCTGCTTCAGTCTCTGTGAGCTTCTACAATCTCTGCTCAGTTT  250

seq1  TTTGTTTTTTTGTTTTTTTTTTTTGTTTTTTTTTGTTTTTTGTTTTTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTTTTGTTTTTTTTTTTTGTTTTTTTTTGTTTTTTGTTTTTAGA  300

seq1  GGGCCTTGCTCTGGTATTCCCCATCCCCTCTGTCTCCCCAGCTCCTTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTTGCTCTGGTATTCCCCATCCCCTCTGTCTCCCCAGCTCCTTCTG  350

seq1  CCTCCTCTTCTACAAGTTTCTCTGAACTCTGACAGGTGGGATTTAATGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCTTCTACAAGTTTCTCTGAACTCTGACAGGTGGGATTTAATGGA  400

seq1  GGACATTCTCATTTAGAGATGTGTGTTTCAAGGTCGTACAGCCACTTGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTCTCATTTAGAGATGTGTGTTTCAAGGTCGTACAGCCACTTGGC  450

seq1  TGTGGGTCTGTGTATTTGTTCCCATCTGAAGCAGGATGGTAATGATGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGTCTGTGTATTTGTTCCCATCTGAAGCAGGATGGTAATGATGATG  500

seq1  ATAAGGAACCAATTTATGAGTAGAGAAGACTATCA  535
      |||||||||||||||||||||||||||||||||||
seq2  ATAAGGAACCAATTTATGAGTAGAGAAGACTATCA  535