BAC Information

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BAC

Clone NameB6Ng01-131K06
Chromosome13 (Build37)
Map Location 33,607,300 - 33,760,971
singlet/doubletdoublet
Overlap geneLOC100041370, EG619715, LOC382743, OTTMUSG00000000712
Upstream geneWrnip1, Serpinb1a, Serpinb1-ps1, Serpinb1c, Serpinb6b, Serpinb9, Serpinb9b, Serpinb1b, LOC628301, Serpinb9c, Serpinb9d, Serpinb9e, Serpinb9f, OTTMUSG00000000724, Serpinb9g
Downstream geneLOC193403, Vmn2r-ps94, OTTMUSG00000000720, Serpinb6c, Serpinb6a, Nqo2, 4930482L21Rik, Ripk1, Bphl, Tubb2a, LOC100042686, Tubb2b, 2310047M15Rik, 3110004L20Rik, LOC620132, EG666666, 1300014I06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131K06.bB6Ng01-131K06.g
ACCDH932646DH932647
length1,124684
definitionDH932646|Mus musculus domesticus DNA, BAC clone: B6Ng01-131K06, 5' end.DH932647|Mus musculus domesticus DNA, BAC clone: B6Ng01-131K06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,759,841 - 33,760,971)(33,607,300 - 33,607,983)
sequence
gaattcactgaacctggagatagcaggtctttgattttttctaaaaaaag
aaatgaacagaaacaacaataaaaaagtaattagatatgtgatggtttta
atgagactggcccacatagattcatagatttgaatgctcagtcgtcagtt
aaattgttttggaagaactagtaggtatagcattttttggaggaggtgta
ttgttgggggtggacattaagatttaaaaacacacagcaggttcaccttg
tctcactcactgcctgctgcttgtcaatcaagatgtaaagttcttagcta
ctagtccagcaccatgtctgactgcttcctggcatattgattatgatcta
aacatataagaactataagcaagcacccagtgtgatgctttcttttataa
aagttgccttggtcatggtatctcttcacagcattagaacagtaacaaag
aaaagaacgaaccaagtatcaagcagagtaggctgatacatgccaaggaa
tcatcagcaagttgtgcaacatcctgctctggtcaagagcatagataaga
cctttcacttctctcaatataaagggacccttgtctttaaagcaacaata
ctggcatcaacaacaagaaagcatgggtttgtgccagcatggtctacaga
gtgaatttcaagactgccagggctacacagaaaaatcctgcaataagaaa
aagagagagttctgattcctgatttagagctaaagatgcagatcaatgtt
agagtactttactctgtgctaggcaaaatattgcttagcatactcaaatc
ttttggttcagtatcaaggcatgtcaaaagaagtccagatttaaagaaca
aatggtcattaatgtttacattttgggtcacatgtgaaggaactaacaca
atgattattaaaattagactaaaaagccaggtacgtggcatgcactttaa
tcctaggacttgtgatacagagcaggcaaacctctgagtttgagttcagc
tgtctacttagtgagttcaggactgggtatagaagagaggccctgtctca
aaacaaaataaaaagaggagaacaggaatggtttcggcaagtacagttgc
tgctaccaaacctgaagaaattga
gaattcagaacttcagaagttatatagaagagtaggcagagctgttatca
gtttttagggcccaaagcactttagtagcatggctaactaagggacttaa
ttatatgggaagcttttttttttcttttttttggcaagggccagaacata
gaattaagaagacaggtatctactattacatagtggaagttcccaaatgg
aaggtagtgagtaatgtccatcagcaatgtggtgttgggtaataaacatc
tggaattcactccccccacccattattaagagatctcagggttcagagac
acacaggtggcacagaaatgagtcagatctttgcattgagacattgagat
ccctggtatatatggtgaaggctctgtgggaataggtaacattgttggtg
cagtgtccaggactgttccaggagatcaagatccacaattataatcattc
agtccttgtgaccattcccctgagccaagatcctgggtaccctgaatgaa
acctaatgtgggaaatataccaaagatatgcctattgtcattgaagttcc
cggagtgtgatgattgtcagatagaggaggttcaagcattctataatctt
ggagaaggagggtgtatgggccacctaaactgtatactggctatcagaaa
aaaaatgttttttgttttttttgggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_33759841_33760971
seq2: B6Ng01-131K06.b_44_1167 (reverse)

seq1  TCAA-TTCTTCAGGTTTGGTAGCAAGCAACTGTACTTGCCG-AACCATTC  48
      |||| |||||||||||||||||| ||||||||||||||||| ||||||||
seq2  TCAATTTCTTCAGGTTTGGTAGC-AGCAACTGTACTTGCCGAAACCATTC  49

seq1  CTGTCTCTCCTCTTTTTATTTTTGTTTTTGGAGACAGGGCCTCTC-TCTA  97
      |||| ||||||||||||| |||||||||  ||||||||||||||| ||||
seq2  CTGT-TCTCCTCTTTTTA-TTTTGTTTT--GAGACAGGGCCTCTCTTCTA  95

seq1  TACCCAGTCCTGAAACTCACTAAGTAGAACAAGCTGAACTCAAACTCAGA  147
      |||||||||||| |||||||||||||||   |||||||||||||||||||
seq2  TACCCAGTCCTG-AACTCACTAAGTAGA--CAGCTGAACTCAAACTCAGA  142

seq1  GGTTTGCCTGCCTCTGTATCACAAGTCCTAGGATTAAAGGTGCATGCCAC  197
      |||||||||| ||||||||||||||||||||||||||| |||||||||| 
seq2  GGTTTGCCTG-CTCTGTATCACAAGTCCTAGGATTAAA-GTGCATGCCA-  189

seq1  CGTACCTGGCTTTTTAGTCTATTTTTAATAATCATTGTGTTAGTTCCTTC  247
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CGTACCTGGCTTTTTAGTCTAATTTTAATAATCATTGTGTTAGTTCCTTC  239

seq1  ACATGTGACCC-AAATGTAAACATTAATGACCATTTGTTCTTTAAATCTG  296
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGACCCAAAATGTAAACATTAATGACCATTTGTTCTTTAAATCTG  289

seq1  GACTTCTTTTGACATGCCTTGATACTGAACCAAAAGATTTGAGTATGCTA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTTTTGACATGCCTTGATACTGAACCAAAAGATTTGAGTATGCTA  339

seq1  AGCAATATTTTGCCTAGCACAGAGTAAAGTACTCTAACATTGATCTGCAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATATTTTGCCTAGCACAGAGTAAAGTACTCTAACATTGATCTGCAT  389

seq1  CTTTAGCTCTAAATCAGGAATCAGAACTCTCTCTTTTTCTTATTGCAGGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGCTCTAAATCAGGAATCAGAACTCTCTCTTTTTCTTATTGCAGGA  439

seq1  TTTTTCTGTGTAGCCCTGGCAGTCTTGAAATTCACTCTGTAGACCATGCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTGTGTAGCCCTGGCAGTCTTGAAATTCACTCTGTAGACCATGCT  489

seq1  GGCACAAACCCATGCTTTCTTGTTGTTGATGCCAGTATTGTTGCTTTAAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAAACCCATGCTTTCTTGTTGTTGATGCCAGTATTGTTGCTTTAAA  539

seq1  GACAAGGGTCCCTTTATATTGAGAGAAGTGAAAGGTCTTATCTATGCTCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGGGTCCCTTTATATTGAGAGAAGTGAAAGGTCTTATCTATGCTCT  589

seq1  TGACCAGAGCAGGATGTTGCACAACTTGCTGATGATTCCTTGGCATGTAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAGAGCAGGATGTTGCACAACTTGCTGATGATTCCTTGGCATGTAT  639

seq1  CAGCCTACTCTGCTTGATACTTGGTTCGTTCTTTTCTTTGTTACTGTTCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTACTCTGCTTGATACTTGGTTCGTTCTTTTCTTTGTTACTGTTCT  689

seq1  AATGCTGTGAAGAGATACCATGACCAAGGCAACTTTTATAAAAGAAAGCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGTGAAGAGATACCATGACCAAGGCAACTTTTATAAAAGAAAGCA  739

seq1  TCACACTGGGTGCTTGCTTATAGTTCTTATATGTTTAGATCATAATCAAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACTGGGTGCTTGCTTATAGTTCTTATATGTTTAGATCATAATCAAT  789

seq1  ATGCCAGGAAGCAGTCAGACATGGTGCTGGACTAGTAGCTAAGAACTTTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAGGAAGCAGTCAGACATGGTGCTGGACTAGTAGCTAAGAACTTTA  839

seq1  CATCTTGATTGACAAGCAGCAGGCAGTGAGTGAGACAAGGTGAACCTGCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGATTGACAAGCAGCAGGCAGTGAGTGAGACAAGGTGAACCTGCT  889

seq1  GTGTGTTTTTAAATCTTAATGTCCACCCCCAACAATACACCTCCTCCAAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTTTTAAATCTTAATGTCCACCCCCAACAATACACCTCCTCCAAA  939

seq1  AAATGCTATACCTACTAGTTCTTCCAAAACAATTTAACTGACGACTGAGC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTATACCTACTAGTTCTTCCAAAACAATTTAACTGACGACTGAGC  989

seq1  ATTCAAATCTATGAATCTATGTGGGCCAGTCTCATTAAAACCATCACATA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAATCTATGAATCTATGTGGGCCAGTCTCATTAAAACCATCACATA  1039

seq1  TCTAATTACTTTTTTATTGTTGTTTCTGTTCATTTCTTTTTTTAGAAAAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTACTTTTTTATTGTTGTTTCTGTTCATTTCTTTTTTTAGAAAAA  1089

seq1  ATCAAAGACCTGCTATCTCCAGGTTCAGTGAATTC  1131
      |||||||||||||||||||||||||||||||||||
seq2  ATCAAAGACCTGCTATCTCCAGGTTCAGTGAATTC  1124

seq1: chr13_33607300_33607983
seq2: B6Ng01-131K06.g_70_753

seq1  GAATTCAGAACTTCAGAAGTTATATAGAAGAGTAGGCAGAGCTGTTATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAACTTCAGAAGTTATATAGAAGAGTAGGCAGAGCTGTTATCA  50

seq1  GTTTTTAGGGCCCAAAGCACTTTAGTAGCATGGCTAACTAAGGGACTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAGGGCCCAAAGCACTTTAGTAGCATGGCTAACTAAGGGACTTAA  100

seq1  TTATATGGGAAGCTTTTTTTTTTCTTTTTTTTGGCAAGGGCCAGAACATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGGGAAGCTTTTTTTTTTCTTTTTTTTGGCAAGGGCCAGAACATA  150

seq1  GAATTAAGAAGACAGGTATCTACTATTACATAGTGGAAGTTCCCAAATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAAGAAGACAGGTATCTACTATTACATAGTGGAAGTTCCCAAATGG  200

seq1  AAGGTAGTGAGTAATGTCCATCAGCAATGTGGTGTTGGGTAATAAACATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAGTGAGTAATGTCCATCAGCAATGTGGTGTTGGGTAATAAACATC  250

seq1  TGGAATTCACTCCCCCCACCCATTATTAAGAGATCTCAGGGTTCAGAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTCACTCCCCCCACCCATTATTAAGAGATCTCAGGGTTCAGAGAC  300

seq1  ACACAGGTGGCACAGAAATGAGTCAGATCTTTGCATTGAGACATTGAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGTGGCACAGAAATGAGTCAGATCTTTGCATTGAGACATTGAGAT  350

seq1  CCCTGGTATATATGGTGAAGGCTCTGTGGGAATAGGTAACATTGTTGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGTATATATGGTGAAGGCTCTGTGGGAATAGGTAACATTGTTGGTG  400

seq1  CAGTGTCCAGGACTGTTCCAGGAGATCAAGATCCACAATTATAATCATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCCAGGACTGTTCCAGGAGATCAAGATCCACAATTATAATCATTC  450

seq1  AGTCCTTGTGACCATTCCCCTGAGCCAAGATCCTGGGTACCCTGAATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTTGTGACCATTCCCCTGAGCCAAGATCCTGGGTACCCTGAATGAA  500

seq1  ACCTAATGTGGGAAATATACCAAAGATATGCCTATTGTCATTGAAGTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAATGTGGGAAATATACCAAAGATATGCCTATTGTCATTGAAGTTCC  550

seq1  CGGAGTGTGATGATTGTCAGATAGAGGAGGTTCAAGCATTCTATAATCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGTGTGATGATTGTCAGATAGAGGAGGTTCAAGCATTCTATAATCTT  600

seq1  GGAGAAGGAGGGTGTATGGGCCACCTAAACTGTATACTGGCTATCAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGGAGGGTGTATGGGCCACCTAAACTGTATACTGGCTATCAGAAA  650

seq1  AAAAATGTTTTTTGTTTTTTTTGGGGGGGGGGGG  684
      ||||||||||||||||||||||||||||||||||
seq2  AAAAATGTTTTTTGTTTTTTTTGGGGGGGGGGGG  684