BAC Information

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BAC

Clone NameB6Ng01-132C15
Chromosome13 (Build37)
Map Location 13,495,443 - 13,638,027
singlet/doubletdoublet
Overlap geneLOC664960, Nid1
Upstream geneHeatr1, LOC546246, Lgals8, LOC100039900, Edaradd, Ero1lb, LOC664862, EG238507, LOC100039744, EG630757, Prl2c3, LOC100039999, LOC100039754, Prl2c2, LOC434483, LOC674723, Prl2c5, LOC630611, LOC100039786, LOC385049, LOC630663, LOC100040108, Gpr137b
Downstream geneLyst, LOC100039831, Gng4, EG665000, EG665008, LOC630894, LOC100040205, B3galnt2, Tbce, Ggps1, LOC100040243, Arid4b, LOC100039916, Hecw1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132C15.bB6Ng01-132C15.g
ACCDH933038DH933039
length7091,148
definitionDH933038|Mus musculus domesticus DNA, BAC clone: B6Ng01-132C15, 5' end.DH933039|Mus musculus domesticus DNA, BAC clone: B6Ng01-132C15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,637,319 - 13,638,027)(13,495,443 - 13,496,618)
sequence
gaattctagaatggggtcagaccagtcatctttcaagggctcagaagtgg
ataagagatgaccaaagagacataataaccagaaaagtgtacgcgaggaa
gactgtgcgataattggagcgtttgagtgcaggctgttttggatcctgtt
attttgtctatggtaattgtgtgttggatgtttctgtctccctaaatgaa
gactctattccagggttttaagagggaaagggatttaggtgaggtcacgg
ggtggggccctgtccttgcatgatctctcctccacccctctttttgtatc
tatttatttctctcctatttcttctcttttttgtctatgctctctctctt
catcccttcctctcctcttacatgtgaggatacaggaagacagtgccaag
agcaaatcaggacaaggatcttaccatggcaattagcaccttggccttgg
gttttcaactttgggactgtgggaaaaaaccataaggtgtctatgtccat
aggctgcaacattgcagtcaaatgcaagctgagggttaggcccagtgctg
cctgccagacactgctttgctttcagtcaattctctacactccagggcgt
ttacagtaaaagctgcgaaggctgtggtttatttctatgtggtgcaataa
attgctggtaaatggtaaataaataagaggtgagagagggagtgtgtgtg
tgtgtgtgt
gaattcaataaaagacgttgttataggactggggaagaagggaatctgga
aggcctggggctcttcccaggagaagtggagatccaagaattaggaggca
atctggggagtcagtggaacccaaagccaagctgggtgtgacaacgaagg
cctgtgcttccagcacaccagaggcgatagcaggcagatcaacagttcaa
ggacagcctctgctacactgcaaatttgaggccagtttggactatgtgag
gccatgtctcaggaaccaggagaaagaatataaaatcaccctgtggcttc
agtggtgacctttaatacaggatgccacctcaccacggcttggctgctgg
gacatgactgctaagggtccagcaagagcaccttattaggtagagagcga
gaggcaacttgctgtgcccctgtgggtgagtgcagatgtgcttagtcagg
aagtcctggaagcagtggggtccacaagggaggaacaagaaatgcatggc
tgtgggcatggaaaccacagacaagaacaatccctgatttgccaaaagcc
tgtgagaatcccaactttctgcgccagtgaaccccagtcactatgaaaat
ggtggacgctggatatgtgtgcccatagcacaggatcccaggctcaggag
atcacagcaccccatacaactcaaacaaacttcaggcatagggttagccc
gcagacagagtcgcttttgtaaggaacatctgagtctagaaacagtctca
taggtgagaacgtctattggcaggagagggtgagtatgtcactgggagaa
gtctcatcagaggagcttcctacttcaatctgtgggcaagtctcagccct
acttgtatacttctcctgggtgacgccccacactgagctgtccccacccc
cagaggtttccatatgttcctcttcttggtttagaggcaacagattgaca
cagttgccttggtgctcccatgggtctgggaaggctagtagcagctacca
gtaggtttaccgctaggctgacagtaggcacgtcttccttttccacttgt
tgacctctgtgacgtttgtattgcctgaccaaaggtgcatataggggggt
ggcctgttgaatggagtgaacttggcaaagctttatccgcctagctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_13637319_13638027
seq2: B6Ng01-132C15.b_45_753 (reverse)

seq1  ACACACACACACACACACTCCCTCTCTCACCTCTTATTTATTTACCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACTCCCTCTCTCACCTCTTATTTATTTACCATTT  50

seq1  ACCAGCAATTTATTGCACCACATAGAAATAAACCACAGCCTTCGCAGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCAATTTATTGCACCACATAGAAATAAACCACAGCCTTCGCAGCTT  100

seq1  TTACTGTAAACGCCCTGGAGTGTAGAGAATTGACTGAAAGCAAAGCAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTAAACGCCCTGGAGTGTAGAGAATTGACTGAAAGCAAAGCAGTG  150

seq1  TCTGGCAGGCAGCACTGGGCCTAACCCTCAGCTTGCATTTGACTGCAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCAGGCAGCACTGGGCCTAACCCTCAGCTTGCATTTGACTGCAATG  200

seq1  TTGCAGCCTATGGACATAGACACCTTATGGTTTTTTCCCACAGTCCCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGCCTATGGACATAGACACCTTATGGTTTTTTCCCACAGTCCCAAA  250

seq1  GTTGAAAACCCAAGGCCAAGGTGCTAATTGCCATGGTAAGATCCTTGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAAACCCAAGGCCAAGGTGCTAATTGCCATGGTAAGATCCTTGTCC  300

seq1  TGATTTGCTCTTGGCACTGTCTTCCTGTATCCTCACATGTAAGAGGAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGCTCTTGGCACTGTCTTCCTGTATCCTCACATGTAAGAGGAGAG  350

seq1  GAAGGGATGAAGAGAGAGAGCATAGACAAAAAAGAGAAGAAATAGGAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGATGAAGAGAGAGAGCATAGACAAAAAAGAGAAGAAATAGGAGAG  400

seq1  AAATAAATAGATACAAAAAGAGGGGTGGAGGAGAGATCATGCAAGGACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATAGATACAAAAAGAGGGGTGGAGGAGAGATCATGCAAGGACAG  450

seq1  GGCCCCACCCCGTGACCTCACCTAAATCCCTTTCCCTCTTAAAACCCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCACCCCGTGACCTCACCTAAATCCCTTTCCCTCTTAAAACCCTGG  500

seq1  AATAGAGTCTTCATTTAGGGAGACAGAAACATCCAACACACAATTACCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGTCTTCATTTAGGGAGACAGAAACATCCAACACACAATTACCAT  550

seq1  AGACAAAATAACAGGATCCAAAACAGCCTGCACTCAAACGCTCCAATTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAATAACAGGATCCAAAACAGCCTGCACTCAAACGCTCCAATTAT  600

seq1  CGCACAGTCTTCCTCGCGTACACTTTTCTGGTTATTATGTCTCTTTGGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACAGTCTTCCTCGCGTACACTTTTCTGGTTATTATGTCTCTTTGGTC  650

seq1  ATCTCTTATCCACTTCTGAGCCCTTGAAAGATGACTGGTCTGACCCCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTATCCACTTCTGAGCCCTTGAAAGATGACTGGTCTGACCCCATT  700

seq1  CTAGAATTC  709
      |||||||||
seq2  CTAGAATTC  709

seq1: chr13_13495443_13496618
seq2: B6Ng01-132C15.g_65_1212

seq1  GAATTCAATAAAAGACGTTGTTATAGGACTGGGGAAGAAGGGAATCTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAAAAGACGTTGTTATAGGACTGGGGAAGAAGGGAATCTGGA  50

seq1  AGGCCTGGGGCTCTTCCCAGGAGAAGTGGAGATCCAAGAATTAGGAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGGGGCTCTTCCCAGGAGAAGTGGAGATCCAAGAATTAGGAGGCA  100

seq1  ATCTGGGGAGTCAGTGGAACCCAAAGCCAAGCTGGGTGTGACAACGAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGGGAGTCAGTGGAACCCAAAGCCAAGCTGGGTGTGACAACGAAGG  150

seq1  CCTGTGCTTCCAGCACACCAGAGGCGATAGCAGGCAGATCAACAGTTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGCTTCCAGCACACCAGAGGCGATAGCAGGCAGATCAACAGTTCAA  200

seq1  GGACAGCCTCTGCTACACTGCAAATTTGAGGCCAGTTTGGACTATGTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCCTCTGCTACACTGCAAATTTGAGGCCAGTTTGGACTATGTGAG  250

seq1  GCCATGTCTCAGGAACCAGGAGAAAGAATATAAAATCACCCTGTGGCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTCTCAGGAACCAGGAGAAAGAATATAAAATCACCCTGTGGCTTC  300

seq1  AGTGGTGACCTTTAATACAGGATGCCACCTCACCACGGCTTGGCTGCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTGACCTTTAATACAGGATGCCACCTCACCACGGCTTGGCTGCTGG  350

seq1  GACATGACTGCTAAGGGTCCAGCAAGAGCACCTTATTAGGTAGAGAGCGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGACTGCTAAGGGTCCAGCAAGAGCACCTTATTAGGTAGAGAGCGA  400

seq1  GAGGCAACTTGCTGTGCCCCTGTGGGTGAGTGCAGATGTGCTTAGTCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAACTTGCTGTGCCCCTGTGGGTGAGTGCAGATGTGCTTAGTCAGG  450

seq1  AAGTCCTGGAAGCAGTGGGGTCCACAAGGGAGGAACAAGAAATGCATGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCTGGAAGCAGTGGGGTCCACAAGGGAGGAACAAGAAATGCATGGC  500

seq1  TGTGGGCATGGAAACCACAGACAAGAACAATCCCTGATTTGCCAAAAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGCATGGAAACCACAGACAAGAACAATCCCTGATTTGCCAAAAGCC  550

seq1  TGTGAGAATCCCAACTTTCTGCGCCAGTGAACCCCAGTCACTATGAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGAATCCCAACTTTCTGCGCCAGTGAACCCCAGTCACTATGAAAAT  600

seq1  GGTGGACGCTGGATATGTGTGCCCATAGCACAGGATCCCAGGCTCAGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGACGCTGGATATGTGTGCCCATAGCACAGGATCCCAGGCTCAGGAG  650

seq1  ATCACAGCACCCCATACAACTCAAACAAACTTCAGGCATAGGGTTAGCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGCACCCCATACAACTCAAACAAACTTCAGGCATAGGGTTAGCCC  700

seq1  GCAGACAGAGTCGCTTTTGTAAGGAACATCTGAGTCTAGAAACAGTCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GCAGACAGAGTCGCTTTTGTAAGGAACATCTGAGTCTAGAAACAGTCTCA  750

seq1  TAGGTGAGAACGTCTATTGGCAGGAGAGGGTGAGTATGTCACTGGGAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGAGAACGTCTATTGGCAGGAGAGGGTGAGTATGTCACTGGGAGAA  800

seq1  GTCTCATCAGAGGAGCTTCCTACTTCAATCTGTGGGCAAGTCTCAGCCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCATCAGAGGAGCTTCCTACTTCAATCTGTGGGCAAGTCTCAGCCCT  850

seq1  ACTTGTATACTTCTCCTGGGTGACGCCCCACACTGAGCTGTCCCCACCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTATACTTCTCCTGGGTGACGCCCCACACTGAGCTGTCCCCACCCC  900

seq1  CAGAGGTTTCCATATGTTCCTCTTCTTGGTTTTAGAGGCAACAAGATTGA  950
      ||||||||||||||||||||||||||||| |||||||||||| |||||||
seq2  CAGAGGTTTCCATATGTTCCTCTTCTTGG-TTTAGAGGCAAC-AGATTGA  948

seq1  CACAGTTGCCTGGTTGCTCCCATGGGTCTGGGAAGGCTAAGTAGCAGGCT  1000
      ||||||||||| | |||||||||||||||||||||||| ||||||| |||
seq2  CACAGTTGCCTTGGTGCTCCCATGGGTCTGGGAAGGCT-AGTAGCA-GCT  996

seq1  AACCAGTAGGTTTACCGCTAGGCTGACCAGTAGGGCACGTCTTCCTTTTT  1050
       ||||||||||||||||||||||||| ||||| |||||||||||||||| 
seq2  -ACCAGTAGGTTTACCGCTAGGCTGA-CAGTA-GGCACGTCTTCCTTTTC  1043

seq1  CACTTGTTGACCTCTGTGACGTTTTGTATATGCTTGACCCAGAAGGTGGC  1100
      ||||||||||||||||||||| ||||||| ||| |||||   ||||| ||
seq2  CACTTGTTGACCTCTGTGACG-TTTGTAT-TGCCTGACC--AAAGGT-GC  1088

seq1  ATTATTAGGGGGTGTGGCCCTGTTGGAATGGGTGTGTCACTGTGGGCAAG  1150
      ||   ||||||| |||| |||||| |||| || |||  ||  | ||||| 
seq2  AT--ATAGGGGG-GTGG-CCTGTT-GAAT-GGAGTG-AAC--TTGGCAA-  1128

seq1  AGCTTTAATACCCTTGTCCTAGCTGC  1176
      |||||||      |   |||||||||
seq2  AGCTTTA------TCCGCCTAGCTGC  1148