BAC Information

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BAC

Clone NameB6Ng01-133G14
Chromosome13 (Build37)
Map Location 117,243,163 - 117,389,246
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041023, LOC547402, LOC100041045, EG623174, Isl1, EG668276, Gm280
Downstream geneLOC100041169, Parp8, LOC668288, LOC623312, Emb, EG623365, LOC382807
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133G14.bB6Ng01-133G14.g
ACCDH933965DH933966
length7531,098
definitionDH933965|Mus musculus domesticus DNA, BAC clone: B6Ng01-133G14, 5' end.DH933966|Mus musculus domesticus DNA, BAC clone: B6Ng01-133G14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,243,163 - 117,243,914)(117,388,138 - 117,389,246)
sequence
gaattcaatttatttactacatattgtggaagagttgagacttctttaga
tcctcacagaacacttagttgggcctacatttaacaatctattagaaagc
ccgttcgacaggaaatgtcgcatgtctcatgtaagtaattgactatagtg
cactgcaggtacggtattacttgtttactttcatgatcatagagtcactg
gatgccatagctggttatatattactcagaaaaaggttccatatcatcca
acatactgctatacctaaaaaagagatgaaaatccaactgtcaacatgca
gcttccatggaatggacactgtcatcacaacactgtaaattcacccataa
accaagtgatcgtaaactggaagctacctatgcaccatcgtgtccttgag
tggaagcaccaaggttgtaatgataccgactcacatttgtgttgtgtagc
acagagacagagtgtctacaccaagaagacatactacatttagtttactt
ttgataactctttcttccttccctcctttcttccctcctttctttctttc
tttctttctttctttctttctttctttctttctttctttctttctttctt
tctttctctctctctctctctctctctctctctctctctctctctctctc
tctttctttctacctttcttcttccgttccgcctctctcatgtatgggat
gatttgtgtgccacccaaaaagatgaattaaaatcacatggtaatacatt
tat
gaattctggctcaaagtgtcctctccagagctactctggagtgaggagtg
cacggaaaaacaaggttatagatggaagaatgatgtcatctgtagcagtg
aaggggatgtggtccaggatggcgaagacatggctatcattcagagacca
gatacgaggctccttttattccccattttaaagatgagttcatttgcccc
tgtagggtaattttttttttccaatgggataaatactgaaatgataggta
atagagattagagacccatagatttacttaggaattatcatataattgct
agaagtgatatgagtggccattttagaaaagtagaatattgtgatagaaa
agtgcccattactcagaaccaaaaacattgatgttacaaattcaggctct
gactgaatttaggaagttctgtacagtgaagaaaagagctttctcttcaa
tcagaccttttctttggtgacaatggagatgctgtagctgtaactctgct
tcctatgttatgatgatgaacatgcaaggttctgcgtgggcgtgccttgt
gagtgacaatgggttgtatgcatgttctttatcatctctttcatttctga
gggtggttctgagtgtgtatgggggagggcattagagcttacatgcaggc
agaggtgaaggctttctggctcatcatgaacacacacacacacacacaca
cacacacacacacacaaagaagttgtgaaggtccgaacatgaaatcaaga
tctttggaatttaagcaatagagaatgcatgctaatgttttttttctcaa
atagctttacataattgaagcaaatgaattaattgtgcttgctaagtgct
aaatgaatcaaggtgatattgaacctcacatatcactgaacacttttgca
gaaacaaaggctgatgtattctcgctatcgtgtatcctagtgttctcact
ctaataaatgaacatctctgggtccaatatgtggacaaacatgaaaatgc
agacttgtctcacagtatctcagtctcatcttcatcttctttctcaaaca
ctatgaggaatatacactatgacactctgcccagtaaggaaacaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_117243163_117243914
seq2: B6Ng01-133G14.b_48_800

seq1  GAATTCAATTTATTTACTACATATTGTGGATGAGTTGAGACTTCTTTAGA  50
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GAATTCAATTTATTTACTACATATTGTGGAAGAGTTGAGACTTCTTTAGA  50

seq1  TCCTCACAGAACACTTAGTTGGGCCTACATTTAACAATCTATTAGAAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACAGAACACTTAGTTGGGCCTACATTTAACAATCTATTAGAAAGC  100

seq1  CCGTTCGACAGGAAATGTCGCATGTCTCATGTAAGTAATTGACTATAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTCGACAGGAAATGTCGCATGTCTCATGTAAGTAATTGACTATAGTG  150

seq1  CACTGCAGGTACGGTATTACTTGTTTACTTTCATGATCATAGAGTCACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCAGGTACGGTATTACTTGTTTACTTTCATGATCATAGAGTCACTG  200

seq1  GATGCCATAGCTGGTTATATATTACTCAGAAAAAGGTTCCATATCATCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCATAGCTGGTTATATATTACTCAGAAAAAGGTTCCATATCATCCA  250

seq1  ACATACTGCTATACCTAAAAAAGAGATGAAAATCCAACTGTCAACATGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACTGCTATACCTAAAAAAGAGATGAAAATCCAACTGTCAACATGCA  300

seq1  GCTTCCATGGAATGGACACTGTCATCACAACACTGTAAATTCACCCATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCATGGAATGGACACTGTCATCACAACACTGTAAATTCACCCATAA  350

seq1  ACCAAGTGATCGTAAACTGGAAGCTACCTATGCACCATCGTGTCCTTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGTGATCGTAAACTGGAAGCTACCTATGCACCATCGTGTCCTTGAG  400

seq1  TGGAAGCACCAAGGTTGTAATGATACCGACTCACATTTGTGTTGTGTAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCACCAAGGTTGTAATGATACCGACTCACATTTGTGTTGTGTAGC  450

seq1  ACAGAGACAGAGTGTCTACACCAAGAAGACATACTACATTTAGTTTACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGACAGAGTGTCTACACCAAGAAGACATACTACATTTAGTTTACTT  500

seq1  TTGATAACTCTTTCTTCCTTCCCTCCTTTCTTCCCTCCTTTCTTTCTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAACTCTTTCTTCCTTCCCTCCTTTCTTCCCTCCTTTCTTTCTTTC  550

seq1  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  600

seq1  TCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  650

seq1  TCTTTCTTTCTTCCTTTCTTCTTCCTTTCTTCCTCTCTCATGTAT-GGAT  699
      ||||||||||| ||||||||||||| |||  |||||||||||||| ||||
seq2  TCTTTCTTTCTACCTTTCTTCTTCCGTTCCGCCTCTCTCATGTATGGGAT  700

seq1  GTTTTGTGTGCACACCCAAAAAGTTGAA-TCAAATCCCATGGGACTACAT  748
      | ||||||||| ||||||||||| |||| | ||||| ||||| | |||||
seq2  GATTTGTGTGC-CACCCAAAAAGATGAATTAAAATCACATGGTAATACAT  749

seq1  TTAT  752
      ||||
seq2  TTAT  753

seq1: chr13_117388138_117389246
seq2: B6Ng01-133G14.g_68_1165 (reverse)

seq1  TTCCTGTTTCCCTACTGTGGCAGAGTGTCAATAGTGTAATAATTCCTCAT  50
      ||||||||||| ||||| ||||||||||| ||||||||   |||||||||
seq2  TTCCTGTTTCCTTACTG-GGCAGAGTGTC-ATAGTGTA--TATTCCTCAT  46

seq1  AAGTGTTTGAGGAAAGGAGATG-AGATGAGACTGAGATACTGTGGAGACC  99
       ||||||||| ||||| ||||| |||||||||||||||||||| |||| |
seq2  -AGTGTTTGA-GAAAGAAGATGAAGATGAGACTGAGATACTGT-GAGA-C  92

seq1  AGGTCTTGCATTTTCATGTTTGTCCCACATATTGGACCCAGAGATGTTCA  149
      | ||| ||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAGTC-TGCATTTTCATGTTTGT-CCACATATTGGACCCAGAGATGTTCA  140

seq1  TTTATTTAGAGTGAG-ACACTAGGATACACGGATAGCGAGAATACATCAG  198
      |||| |||||||||| |||||||||||||| |||||||||||||||||||
seq2  TTTA-TTAGAGTGAGAACACTAGGATACAC-GATAGCGAGAATACATCAG  188

seq1  CCTTTGTTTCTGC-AAAGTGTTCAGTGATATGTGAGGTTCAATAATCACC  247
      ||||||||||||| ||||||||||||||||||||||||||||| ||||||
seq2  CCTTTGTTTCTGCAAAAGTGTTCAGTGATATGTGAGGTTCAAT-ATCACC  237

seq1  TTGATTCATTTTAGCACTTAGCAAGCACAATTAATTCATTTGCTTCAATT  297
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTCA-TTTAGCACTTAGCAAGCACAATTAATTCATTTGCTTCAATT  286

seq1  ATGTAAAGCTATTTGAGAAAAAAAACATTAGCATGCATTCTCTATTGCTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAAGCTATTTGAGAAAAAAAACATTAGCATGCATTCTCTATTGCTT  336

seq1  AATTTCCAAAGATCTTGATTTCATGTTCGGACCTTCACAACTTCTTTGTG  397
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCAAAGATCTTGATTTCATGTTCGGACCTTCACAACTTCTTTGTG  386

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCATGATGAGCCAGAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCATGATGAGCCAGAAA  436

seq1  GCCTTCACCTCTGCCTGCATGTAAGCTCTAATGCCCTCCCCCATACACAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCACCTCTGCCTGCATGTAAGCTCTAATGCCCTCCCCCATACACAC  486

seq1  TCAGAACCACCCTCAGAAATGAAAGAGATGATAAAGAACATGCATACAAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACCACCCTCAGAAATGAAAGAGATGATAAAGAACATGCATACAAC  536

seq1  CCATTGTCACTCACAAGGCACGCCCACGCAGAACCTTGCATGTTCATCAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGTCACTCACAAGGCACGCCCACGCAGAACCTTGCATGTTCATCAT  586

seq1  CATAACATAGGAAGCAGAGTTACAGCTACAGCATCTCCATTGTCACCAAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACATAGGAAGCAGAGTTACAGCTACAGCATCTCCATTGTCACCAAA  636

seq1  GAAAAGGTCTGATTGAAGAGAAAGCTCTTTTCTTCACTGTACAGAACTTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGTCTGATTGAAGAGAAAGCTCTTTTCTTCACTGTACAGAACTTC  686

seq1  CTAAATTCAGTCAGAGCCTGAATTTGTAACATCAATGTTTTTGGTTCTGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATTCAGTCAGAGCCTGAATTTGTAACATCAATGTTTTTGGTTCTGA  736

seq1  GTAATGGGCACTTTTCTATCACAATATTCTACTTTTCTAAAATGGCCACT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGGGCACTTTTCTATCACAATATTCTACTTTTCTAAAATGGCCACT  786

seq1  CATATCACTTCTAGCAATTATATGATAATTCCTAAGTAAATCTATGGGTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCACTTCTAGCAATTATATGATAATTCCTAAGTAAATCTATGGGTC  836

seq1  TCTAATCTCTATTACCTATCATTTCAGTATTTATCCCATTGGAAAAAAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATCTCTATTACCTATCATTTCAGTATTTATCCCATTGGAAAAAAAA  886

seq1  AATTACCCTACAGGGGCAAATGAACTCATCTTTAAAATGGGGAATAAAAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACCCTACAGGGGCAAATGAACTCATCTTTAAAATGGGGAATAAAAG  936

seq1  GAGCCTCGTATCTGGTCTCTGAATGATAGCCATGTCTTCGCCATCCTGGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTCGTATCTGGTCTCTGAATGATAGCCATGTCTTCGCCATCCTGGA  986

seq1  CCACATCCCCTTCACTGCTACAGATGACATCATTCTTCCATCTATAACCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATCCCCTTCACTGCTACAGATGACATCATTCTTCCATCTATAACCT  1036

seq1  TGTTTTTCCGTGCACTCCTCACTCCAGAGTAGCTCTGGAGAGGACACTTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTCCGTGCACTCCTCACTCCAGAGTAGCTCTGGAGAGGACACTTT  1086

seq1  GAGCCAGAATTC  1109
      ||||||||||||
seq2  GAGCCAGAATTC  1098