BAC Information

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BAC

Clone NameB6Ng01-133H13
Chromosome13 (Build37)
Map Location 67,083,658 - 67,084,509
singlet/doubletsinglet
Overlap genePtdss1
Upstream geneEG628746, LOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1
Downstream geneZfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133H13.bB6Ng01-133H13.g
ACCDH934009DH934010
length8521,255
definitionDH934009|Mus musculus domesticus DNA, BAC clone: B6Ng01-133H13, 5' end.DH934010|Mus musculus domesticus DNA, BAC clone: B6Ng01-133H13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagttgttctctaatgttcttaacgtaaattgcaaactttgttgt
gtcatcctcagagctcaggaaaggcagaggatggacagaactttaaagga
gattttaactaaatatacccatgagaatggtggtaactctggcctcacac
ccttctcagggtccgatatacccacttacaaaaaaagttcacccaacatg
aaacatgggacaaccacctcccatgatctcctgagtacatgctggactgt
cccgctccaatctctgagtccttaaaaagattgcagttaaccttggataa
gatttttccctcaggtccaggctgctcaaccagttgggtggtctctacct
gatgacccattccagcctggagacactatactaatccactgcttcaaaac
tgaccagcttgaaactaggtggggagggcttacattagatgattcgttgg
atgctgactgctgttgagattgtttgctactcttgtctgggttcattagt
tgcacctaaagaaggcacctgatgaatccatagaagaagaacccaacccc
cagaggtgaaaagggaataaaaaagaccattcattaaaagtcaaactttc
tgttttgcagccccataggaggaacaacaatatgaactaaccagtactcc
cagagctcccttggactaaaccaccaatcaaagaaaacacatgatgggac
tcgtgtctctaactgcatatgtagcagaggatggcctagtccgtcttcaa
tgggaggagaggcccttggtcctgtgaaggctctatgccccagtataggg
gaatgccagtgctaggaggaggcaggagtgggtgggttggggagcaaaag
ga
gaattcaaggcccatacctagacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcagttctacaacaaaaggagatcaagggg
atacaaattggaaaagatgaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaattcctaaacc
tgataaacagcttcggtgaagtagctggatataaaataaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgcgaaagaaattag
ggaaacaacacccttctcaatagtcacgaataatataaagtatctcggcg
tgactctaactaagtgaaagatctgtatgataaaaacttcaagtctctga
agaaagaaattaaagatctcagaagatggaaagatctcccatgctcatgg
attggcaggatcaacattgtaaaaatggctatcttgccaaaagcaatcta
cagattcaatgcaatccccatcaaaattccaaatcaattcttcaatgaat
tagaaggagcaatttgcaaattcatctggaataacaaaaaacctaggata
gcaaaaactcttctcaaggataaaataacctctggtggaatcaccatgcc
tgacctaaagctttactacagagcaattgtgataaaaactgcatggtact
ggtatagagacagacaagtagaccaatggaacagaattgaagacccagag
atgaacccacacacctatggtcacttgatcttcgacaagggagctaaaac
cagctagtggaagaaagacagcattttcaacaattggtgctggcacagct
gggtgttatcatgtagaagatgtgaatcgatccatacttatctctgtact
aagtcaatctagtggatcaaggaacttcacataaaatcagagaaactgaa
acttatagaggagaaagtggaggaaagccttgagattgggcacaagggga
aaattctgaacgaacaacatgcttgtgctgttaagaatcgagatgaacat
gggaactaatgaactcaaagttctgcagccaagaatccgtcatagacaaa
gacctccacgatgtggtaggagatcgtgcactctcctaatcgaatagagg
ggact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67083658_67084509
seq2: B6Ng01-133H13.b_47_898 (reverse)

seq1  TCCTTCTGCTCCCCAACCCACCCACTCCTGCCTCCTCCTAGCACTGGCAT  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTGCTCCCCAACCCACCCACTCCTGCCTCCTCCTAGCACTGGCAT  50

seq1  TCCCCTATACTGGGGCATAGAGCCTTCACAGGACCAAGGGCCTCTCCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTATACTGGGGCATAGAGCCTTCACAGGACCAAGGGCCTCTCCTCC  100

seq1  CATTGAAGACGGACTAGGCCATCCTCTGCTACATATGCAGTTAGAGACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAAGACGGACTAGGCCATCCTCTGCTACATATGCAGTTAGAGACAC  150

seq1  GAGTCCCATCATGTGTTTTCTTTGATTGGTGGTTTAGTCCAAGGGAGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCCATCATGTGTTTTCTTTGATTGGTGGTTTAGTCCAAGGGAGCTC  200

seq1  TGGGAGTACTGGTTAGTTCATATTGTTGTTCCTCCTATGGGGCTGCAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGTACTGGTTAGTTCATATTGTTGTTCCTCCTATGGGGCTGCAAAA  250

seq1  CAGAAAGTTTGACTTTTAATGAATGGTCTTTTTTATTCCCTTTTCACCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGTTTGACTTTTAATGAATGGTCTTTTTTATTCCCTTTTCACCTC  300

seq1  TGGGGGTTGGGTTCTTCTTCTATGGATTCATCAGGTGCCTTCTTTAGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGTTGGGTTCTTCTTCTATGGATTCATCAGGTGCCTTCTTTAGGTG  350

seq1  CAACTAATGAACCCAGACAAGAGTAGCAAACAATCTCAACAGCAGTCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAATGAACCCAGACAAGAGTAGCAAACAATCTCAACAGCAGTCAGC  400

seq1  ATCCAACGAATCATCTAATGTAAGCCCTCCCCACCTAGTTTCAAGCTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAACGAATCATCTAATGTAAGCCCTCCCCACCTAGTTTCAAGCTGGT  450

seq1  CAGTTTTGAAGCAGTGGATTAGTATAGTGTCTCCAGGCTGGAATGGGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTGAAGCAGTGGATTAGTATAGTGTCTCCAGGCTGGAATGGGTCA  500

seq1  TCAGGTAGAGACCACCCAACTGGTTGAGCAGCCTGGACCTGAGGGAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTAGAGACCACCCAACTGGTTGAGCAGCCTGGACCTGAGGGAAAAA  550

seq1  TCTTATCCAAGGTTAACTGCAATCTTTTTAAGGACTCAGAGATTGGAGCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATCCAAGGTTAACTGCAATCTTTTTAAGGACTCAGAGATTGGAGCG  600

seq1  GGACAGTCCAGCATGTACTCAGGAGATCATGGGAGGTGGTTGTCCCATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGTCCAGCATGTACTCAGGAGATCATGGGAGGTGGTTGTCCCATGT  650

seq1  TTCATGTTGGGTGAACTTTTTTTGTAAGTGGGTATATCGGACCCTGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTTGGGTGAACTTTTTTTGTAAGTGGGTATATCGGACCCTGAGAA  700

seq1  GGGTGTGAGGCCAGAGTTACCACCATTCTCATGGGTATATTTAGTTAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGAGGCCAGAGTTACCACCATTCTCATGGGTATATTTAGTTAAAA  750

seq1  TCTCCTTTAAAGTTCTGTCCATCCTCTGCCTTTCCTGAGCTCTGAGGATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTTAAAGTTCTGTCCATCCTCTGCCTTTCCTGAGCTCTGAGGATG  800

seq1  ACACAACAAAGTTTGCAATTTACGTTAAGAACATTAGAGAACAACTGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAACAAAGTTTGCAATTTACGTTAAGAACATTAGAGAACAACTGAAT  850

seq1  TC  852
      ||
seq2  TC  852