BAC Information

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BAC

Clone NameB6Ng01-133K21
Chromosome13 (Build37)
Map Location 8,383,478 - 8,572,914
singlet/doubletdoublet
Overlap geneAdarb2, EG666941
Upstream geneEG623516, LOC791083, LOC382722
Downstream geneWdr37, LOC100039632, Idi1, EG382723, LOC100039655, Idi2, Gtpbp4, LOC667721, Larp5, EG667727, LOC100039719, Dip2c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133K21.bB6Ng01-133K21.g
ACCDH934166DH934167
length1,1921,125
definitionDH934166|Mus musculus domesticus DNA, BAC clone: B6Ng01-133K21, 5' end.DH934167|Mus musculus domesticus DNA, BAC clone: B6Ng01-133K21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,383,478 - 8,384,696)(8,571,783 - 8,572,914)
sequence
gaattctttgtctaagctgatttaggtatggaaccccaatatttgtaata
agaatcgcacacccacctgttcccacaaaagagaggcaagaattctaaga
agcccttgatccctagctgaaaacaaaacaaaactagagtttgcattact
ttttactgttttcctttttagccctccattatttcctgcctcaagatgaa
aagccctgtcaaatcaagagacaatcttataaattgtctttaagttccta
agagcatttagagtcaattcaaggcagaatataaagaactggaagggccc
tttgctcttctgattttgtttccatcccttctactatccatactcccaaa
tctccctgatatcaaaccaccccactccaggttctctttccatttcctgt
caaatctggatggggatccattagccagcatttatatttccggatgacac
tagtgtagctgagtgttttcttatctccagaagaatttgggtttctgaca
ggtcaatagcagaagaaaagccatctggatcccaggccccagtcctccca
tgttgtaaactgtcttctctgaggaagaatcctgggagatgttttgacct
tgtgacatattagtattttcagaacactgatatattgtaaggaacagttt
caaaaataaacaactacctatatgcacatacgtggatggatgtgaaaaca
tcacttaacttactcagcctgcctcaccacagctgtgcacttctctaagg
agtatgtcatgctgggtctttgccctgaggggactcatctttcttttggt
tgcactactataagcagcttgagtgcttcagcattctagagcctctcatg
aacacagatgacagatgtcgcagcacttttcccagactttacctaagcct
ttggggaaatgatgttgccaacacttaccagacaggcacacaggtgaggg
cccaattgtgagcaaacagaagttctcagttaactttagtttagtgagca
gagcaagtacatatattctattatattcatacatgataagggttcggagg
aaatgagctgagcatccaatggctgtgattctatagaggacttggaaaga
agatcgttgatcacaactggataggaaagatggggcttggccggggtgga
gctctggagcttaagcctcataggtcactttctactccgaag

gaattccaggtagcagaaggtagaatggggggaagtcagaaacataaaaa
aaagacaaagacatagaaaagagaggaagcaaggccatagagttccttgt
tagtaaatgcacagggatggatctaggaattgttcttgtgtctttctcta
gcaccctccctccccctggtagagctatgcatttatttgagcccaagctg
aaagtcaggactgatgaaggttaggttttacctgctccttaaagtgatta
ttgcatatgcagtaaatacttgaggtgaagtaactgaatagaaggcaggg
agagcaggaaaacccactctccgtcacccgggactcattatctatagatt
atcctttccctcacccaagattggtgaagagcaggatatttggggccagg
aagatggctgagtcaataaagtgaatgttatgcaagcatgagtttgggtc
atcagcatccacataagaagcaggaaatggtagcatgtgcctaaggtcta
aagcggtggggatagaaggactactggggtatgctgacccactagtcttg
ccaaattgtcgagctccaggttcagtgagagagtctgtatcaaaaataag
gaggagacgctggagagatggctcagcagttaagagtagatactcctatt
gcagcgagatccataatcttctagcacccacatcagtgggctcacaactg
cctattgccctaggtccaggggatctgagtccctcttctggacttgagag
cactgaagtgatgtgcatgccccctacatacagccatagttaaaaaataa
acacaaataaaaataagaaggaaagcgataggagggagcatctcacatta
atccctgacatgcctctatttgcacgcacacacatgtgaatactcacaca
tgcacatgtacatactgcacacgcacatacattggcccatattcaaagaa
cagctgctgtggcctttatcttggtgcctgtttatagtcagataaatgtg
gaatgaatgaatgaatgaatgaatgccctactagtcattattcaagtgaa
gagtccctatgttcttgtgcttcacacacacccctaggcagaatctggat
ttgatgactgcccagattcttctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_8383478_8384696
seq2: B6Ng01-133K21.b_49_1240

seq1  GAATTCTTTGTCTAAGCTGATTTAGGTATGGAACCCCAATATTTGTAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTCTAAGCTGATTTAGGTATGGAACCCCAATATTTGTAATA  50

seq1  AGAATCGCACACCCACCTGTTCCCACAAAAGAGAGGCAAGAATTCTAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCGCACACCCACCTGTTCCCACAAAAGAGAGGCAAGAATTCTAAGA  100

seq1  AGCCCTTGATCCCTAGCTGAAAACAAAACAAAACTAGAGTTTGCATTACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTTGATCCCTAGCTGAAAACAAAACAAAACTAGAGTTTGCATTACT  150

seq1  TTTTACTGTTTTCCTTTTTAGCCCTCCATTATTTCCTGCCTCAAGATGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTGTTTTCCTTTTTAGCCCTCCATTATTTCCTGCCTCAAGATGAA  200

seq1  AAGCCCTGTCAAATCAAGAGACAATCTTATAAATTGTCTTTAAGTTCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCTGTCAAATCAAGAGACAATCTTATAAATTGTCTTTAAGTTCCTA  250

seq1  AGAGCATTTAGAGTCAATTCAAGGCAGAATATAAAGAACTGGAAGGGCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCATTTAGAGTCAATTCAAGGCAGAATATAAAGAACTGGAAGGGCCC  300

seq1  TTTGCTCTTCTGATTTTGTTTCCATCCCTTCTACTATCCATACTCCCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTCTTCTGATTTTGTTTCCATCCCTTCTACTATCCATACTCCCAAA  350

seq1  TCTCCCTGATATCAAACCACCCCACTCCAGGTTCTCTTTCCATTTCCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTGATATCAAACCACCCCACTCCAGGTTCTCTTTCCATTTCCTGT  400

seq1  CAAATCTGGATGGGGATCCATTAGCCAGCATTTATATTTCCGGATGACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCTGGATGGGGATCCATTAGCCAGCATTTATATTTCCGGATGACAC  450

seq1  TAGTGTAGCTGAGTGTTTTCTTATCTCCAGAAGAATTTGGGTTTCTGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTAGCTGAGTGTTTTCTTATCTCCAGAAGAATTTGGGTTTCTGACA  500

seq1  GGTCAATAGCAGAAGAAAAGCCATCTGGATCCCAGGCCCCAGTCCTCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAATAGCAGAAGAAAAGCCATCTGGATCCCAGGCCCCAGTCCTCCCA  550

seq1  TGTTGTAAACTGTCTTCTCTGAGGAAGAATCCTGGGAGATGTTTTGACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTAAACTGTCTTCTCTGAGGAAGAATCCTGGGAGATGTTTTGACCT  600

seq1  TGTGACATATTAGTATTTTCAGAACACTGATATATTGTAAGGAACAGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACATATTAGTATTTTCAGAACACTGATATATTGTAAGGAACAGTTT  650

seq1  CAAAAATAAACAACTACCTATATGCACATACGTGGATGGATGTGAAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATAAACAACTACCTATATGCACATACGTGGATGGATGTGAAAACA  700

seq1  TCACTTAACTTACTCAGCCTGCCTCACCACAGCTGTGCACTTCTCTAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTAACTTACTCAGCCTGCCTCACCACAGCTGTGCACTTCTCTAAGG  750

seq1  AGTATGTCATGCTGGGTCTTTGCCCTGAGGGGACTCATCTTTCTTTTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGTCATGCTGGGTCTTTGCCCTGAGGGGACTCATCTTTCTTTTGGT  800

seq1  TGCACTACTATAAGCAGCTTGAGTGCTTCAGCATTCTAGAGCCTCTCATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTACTATAAGCAGCTTGAGTGCTTCAGCATTCTAGAGCCTCTCATG  850

seq1  AACACAGATGACAGATGTCGCAGCACTTTTCCCAGACTTTACCTAAGCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGATGACAGATGTCGCAGCACTTTTCCCAGACTTTACCTAAGCCT  900

seq1  TTGGGGAAATGATGTTGCCAAACACTTACCAGACAGGCACACAGGTGAGG  950
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTGGGGAAATGATGTTGCC-AACACTTACCAGACAGGCACACAGGTGAGG  949

seq1  GCCCCAATTGTGAGCAAAACAGAAAGTTCTCAGTTAACTTTAGTTTTAGT  1000
      | ||||||||||||| |||||| |||||||||||||||||||| ||||||
seq2  G-CCCAATTGTGAGC-AAACAG-AAGTTCTCAGTTAACTTTAG-TTTAGT  995

seq1  GGAGCAGAGCAAGTAACAATATATTCTATTATATTCATACATGATAAAGG  1050
       ||||||||||||||   ||||||||||||||||||||||||||| ||||
seq2  -GAGCAGAGCAAGTA--CATATATTCTATTATATTCATACATGAT-AAGG  1041

seq1  GTTCGGGAGGAAATGAGGCTGAGCAATCCATGGCTGTGAATTCATATAGA  1100
      |||| ||||||||||| ||||||||  | ||||||||| |||| ||||||
seq2  GTTC-GGAGGAAATGA-GCTGAGCATCCAATGGCTGTG-ATTC-TATAGA  1087

seq1  GGACTTGGAGAAGAGGATCGTTTGATCACAACCTGAATGAGGGAAAAGAT  1150
      ||||||||| |||| ||||| |||||||||| ||| || |||  ||||||
seq2  GGACTTGGA-AAGAAGATCG-TTGATCACAA-CTGGAT-AGG--AAAGAT  1131

seq1  GGAGCTTGGGCCGGGGTGTGGAGCCTCAGGAGCTTAAGCTTCATAAAGCT  1200
      || |||| |||||||  |||||| ||| ||||||||||| ||||  || |
seq2  GGGGCTT-GGCCGGG--GTGGAG-CTCTGGAGCTTAAGCCTCAT--AGGT  1175

seq1  CATCTTTCTTACTCCGAAG  1219
      || ||||| ||||||||||
seq2  CA-CTTTC-TACTCCGAAG  1192


seq1: chr13_8571783_8572914
seq2: B6Ng01-133K21.g_69_1193 (reverse)

seq1  GCAGAAGAATCTGGGCTGTCATCAAAATCCAGATCCTGCCTAGGGGTGTG  50
      |||||||||||||||| |||||| |||||||||| |||||||||||||||
seq2  GCAGAAGAATCTGGGCAGTCATC-AAATCCAGATTCTGCCTAGGGGTGTG  49

seq1  TGTGAAGCCACAAAGAACATAAAGGGACTCTTCACCTTGAATAATGACTA  100
      ||||||| ||| ||||||||  |||||||||||| |||||||||||||||
seq2  TGTGAAG-CAC-AAGAACAT--AGGGACTCTTCA-CTTGAATAATGACTA  94

seq1  GGTAGGGCATTCATTCATTCATTCATTCATTCCACATTTATCTGACTATA  150
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -GTAGGGCATTCATTCATTCATTCATTCATTCCACATTTATCTGACTATA  143

seq1  AACAGGCA-CAAGATAAAGGCCACAGCAGCTGTTCTTTGAATATGGGCAC  199
      |||||||| |||||||||||||||||||||||||||||||||||||||  
seq2  AACAGGCACCAAGATAAAGGCCACAGCAGCTGTTCTTTGAATATGGGCCA  193

seq1  ATGTATGTGCGTGTGCAGTATGTACATGTGCATGTGTGAGTATTCACATG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGTGCGTGTGCAGTATGTACATGTGCATGTGTGAGTATTCACATG  243

seq1  TGTTGTGCGTGCAAATAGAGGCATGTCAGGGATTAATGTGAGATGCTCCC  299
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TG-TGTGCGTGCAAATAGAGGCATGTCAGGGATTAATGTGAGATGCTCCC  292

seq1  TCCTATCGCTTTCCTTCTTATTTTTATTTGTGTTTATTTTTTAACTATGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATCGCTTTCCTTCTTATTTTTATTTGTGTTTATTTTTTAACTATGG  342

seq1  CTGTATGTAGGGGGCATGCACATCACTTCAGTGCTCTCAAGTCCAGAAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGTAGGGGGCATGCACATCACTTCAGTGCTCTCAAGTCCAGAAGA  392

seq1  GGGACTCAGATCCCCTGGACCTAGGGCAATAGGCAGTTGTGAGCCCACTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTCAGATCCCCTGGACCTAGGGCAATAGGCAGTTGTGAGCCCACTG  442

seq1  ATGTGGGTGCTAGAAGATTATGGATCTCGCTGCAATAGGAGTATCTACTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGGTGCTAGAAGATTATGGATCTCGCTGCAATAGGAGTATCTACTC  492

seq1  TTAACTGCTGAGCCATCTCTCCAGCGTCTCCTCCTTATTTTTGATACAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGCTGAGCCATCTCTCCAGCGTCTCCTCCTTATTTTTGATACAGA  542

seq1  CTCTCTCACTGAACCTGGAGCTCGACAATTTGGCAAGACTAGTGGGTCAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCACTGAACCTGGAGCTCGACAATTTGGCAAGACTAGTGGGTCAG  592

seq1  CATACCCCAGTAGTCCTTCTATCCCCACCGCTTTAGACCTTAGGCACATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCCCAGTAGTCCTTCTATCCCCACCGCTTTAGACCTTAGGCACATG  642

seq1  CTACCATTTCCTGCTTCTTATGTGGATGCTGATGACCCAAACTCATGCTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCATTTCCTGCTTCTTATGTGGATGCTGATGACCCAAACTCATGCTT  692

seq1  GCATAACATTCACTTTATTGACTCAGCCATCTTCCTGGCCCCAAATATCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAACATTCACTTTATTGACTCAGCCATCTTCCTGGCCCCAAATATCC  742

seq1  TGCTCTTCACCAATCTTGGGTGAGGGAAAGGATAATCTATAGATAATGAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTCACCAATCTTGGGTGAGGGAAAGGATAATCTATAGATAATGAG  792

seq1  TCCCGGGTGACGGAGAGTGGGTTTTCCTGCTCTCCCTGCCTTCTATTCAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGGGTGACGGAGAGTGGGTTTTCCTGCTCTCCCTGCCTTCTATTCAG  842

seq1  TTACTTCACCTCAAGTATTTACTGCATATGCAATAATCACTTTAAGGAGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTCACCTCAAGTATTTACTGCATATGCAATAATCACTTTAAGGAGC  892

seq1  AGGTAAAACCTAACCTTCATCAGTCCTGACTTTCAGCTTGGGCTCAAATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAAACCTAACCTTCATCAGTCCTGACTTTCAGCTTGGGCTCAAATA  942

seq1  AATGCATAGCTCTACCAGGGGGAGGGAGGGTGCTAGAGAAAGACACAAGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATAGCTCTACCAGGGGGAGGGAGGGTGCTAGAGAAAGACACAAGA  992

seq1  ACAATTCCTAGATCCATCCCTGTGCATTTACTAACAAGGAACTCTATGGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCCTAGATCCATCCCTGTGCATTTACTAACAAGGAACTCTATGGC  1042

seq1  CTTGCTTCCTCTCTTTTCTATGTCTTTGTCTTTTTTTTATGTTTCTGACT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTCCTCTCTTTTCTATGTCTTTGTCTTTTTTTTATGTTTCTGACT  1092

seq1  TCCCCCCATTCTACCTTCTGCTACCTGGAATTC  1132
      |||||||||||||||||||||||||||||||||
seq2  TCCCCCCATTCTACCTTCTGCTACCTGGAATTC  1125


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