BAC Information

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BAC

Clone NameB6Ng01-133M20
Chromosome13 (Build37)
Map Location 67,055,947 - 67,192,656
singlet/doubletdoublet
Overlap genePtdss1, Zfp712, Zfp708
Upstream geneEG628746, LOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1
Downstream geneZfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133M20.bB6Ng01-133M20.g
ACCDH934258DH934259
length820313
definitionDH934258|Mus musculus domesticus DNA, BAC clone: B6Ng01-133M20, 5' end.DH934259|Mus musculus domesticus DNA, BAC clone: B6Ng01-133M20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,191,799 - 67,192,656)(67,055,947 - 67,056,259)
sequence
gaattcttccacttaggagtgattctctccctaatccttcagtcctatat
catttcatcaattaattgtgtattttcttaggttagtctttttattcatt
tttagttccagtacactgtgttctgataggatatacaaaatttgtttctt
tttctttccttttttcttttcctttcctttcctttcctttcctttccttt
cctttcctttcctttcctttcctttcctttcctttcctttcctttccttt
cctttccttatggtttggctcttggcctgtgatgtggtgcattttagaga
agatatcttatgccactgagcagaatatattctttttgtggttgtgcata
atgttctgtagctatttttttttaaacccagttaatgttttggatattta
tcttgaagcatcctttgcacatggttggtttgtttgtacgacctgtctag
gtgtaagactgcaatatgggaatgccctgtttttattttctttgaaccat
ttgatttcccatgtcatttatgttatctaggtagaactgacacctgattt
gtgtggaacattacattacttgtgtctgtgttacttacacagagtgcgct
ctcatgcttctgatcgttttgttgagtactctatccgtagatattcctat
atgttcatagcttcactgttttacagttgatgacatgttccagcatgtca
tcttcagtgatcggtctgagagagagaagagactgaataatgtcatagat
aagcagataagatagagagatgtgatgactgagaactccattatgctagc
atcatctgcacgcagtagac
agactgtgggcagagtaaggagtgtgggcgcagaggacattggagagctt
tcttagaaggatggagtgattgtatttactatttgaaaaggatttccctg
gtgctacacagtgcttgcttcacaagcataaggaactgagttcagtccct
agcaccccaagcactcacaccatttgtgctctagtacctagggtttcata
gtacttgcagctcagcctagaactctagcctaaatatttctgtgtcatag
atcatttctatggtaaaagaattatctcacaaattttaaaaggttatagt
ggggggggggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67191799_67192656
seq2: B6Ng01-133M20.b_48_867 (reverse)

seq1  GTCTACTGCGTGCCAAGATGGATGCCTAGCATAAAATGGGAGTTTCTTCA  50
      |||||||||||||  |||| |||| |||||||||    ||||||   |||
seq2  GTCTACTGCGTGC--AGAT-GATG-CTAGCATAA---TGGAGTT--CTCA  41

seq1  GTCATCACAATCTTCTCTATCTTTATTCTGCTTTATCTTATGACCTTTAT  100
      |||||||| ||| ||||||||||   ||||| ||||| ||||| | ||||
seq2  GTCATCAC-ATC-TCTCTATCTT--ATCTGC-TTATC-TATGA-CATTAT  84

seq1  CCAGGTTCTCTCTCTCTCTCTCAAGACCCCATCACTGAAGAATGACCTGC  150
       |||  ||||| |||||||||| ||| || |||||||||| ||||| |||
seq2  TCAG--TCTCT-TCTCTCTCTC-AGA-CCGATCACTGAAG-ATGACATGC  128

seq1  TGGAACATGTCATCAAACTGTAAAACAAGTGAAGCTATGAAAACATATAG  200
      |||||||||||||| ||||||||||| ||||||||||||  |||||||||
seq2  TGGAACATGTCATC-AACTGTAAAAC-AGTGAAGCTATG--AACATATAG  174

seq1  GAATAATCCTACCGGATAGAGTAACTTCAAACAAAAACGAATCAGAAGCA  250
      |||||   ||| |||||||||||   ||||   |||||| ||||||||| 
seq2  GAATA--TCTA-CGGATAGAGTA--CTCAA--CAAAACG-ATCAGAAGC-  215

seq1  ATGAAGAGCGCCACTCTGTGTAAGTAAACACAGACACAAGTAATGTAAAT  300
      ||| |||||| |||||||||||||| |||||||||||||||||||| |||
seq2  ATG-AGAGCG-CACTCTGTGTAAGT-AACACAGACACAAGTAATGT-AAT  261

seq1  GTTTCCACACAAAATCAGGTTTTCAGTTCTACCTAGATAACATTAAAAGA  350
      | |||||||| |||||||| | |||||||||||||||||||| |||| ||
seq2  G-TTCCACAC-AAATCAGG-TGTCAGTTCTACCTAGATAACA-TAAATGA  307

seq1  CATGGGAAATCAAATGGTTCAAAGAAAATAAAAACAGGGCATTCCCATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGAAATCAAATGGTTCAAAGAAAATAAAAACAGGGCATTCCCATAT  357

seq1  TGCAGTCTTACACCTAGACAGGTCGTACAAACAAACCAACCATGTGCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTCTTACACCTAGACAGGTCGTACAAACAAACCAACCATGTGCAAA  407

seq1  GGATGCTTCAAGATAAATATCCAAAACATTAACTGGGTTTAAAAAAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCTTCAAGATAAATATCCAAAACATTAACTGGGTTTAAAAAAAAAT  457

seq1  AGCTACAGAACATTATGCACAACCACAAAAAGAATATATTCTGCTCAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACAGAACATTATGCACAACCACAAAAAGAATATATTCTGCTCAGTG  507

seq1  GCATAAGATATCTTCTCTAAAATGCACCACATCACAGGCCAAGAGCCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAGATATCTTCTCTAAAATGCACCACATCACAGGCCAAGAGCCAAA  557

seq1  CCAT-----AAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAA  645
      ||||     |||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAA  607

seq1  AGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAAGAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAAGAA  657

seq1  AAAAGGAAAGAAAAAGAAACAAATTTTGTATATCCTATCAGAACACAGTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAAAGAAAAAGAAACAAATTTTGTATATCCTATCAGAACACAGTG  707

seq1  TACTGGAACTAAAAATGAATAAAAAGACTAACCTAAGAAAATACACAATT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGAACTAAAAATGAATAAAAAGACTAACCTAAGAAAATACACAATT  757

seq1  AATTGATGAAATGATATAGGACTGAAGGATTAGGGAGAGAATCACTCCTA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATGAAATGATATAGGACTGAAGGATTAGGGAGAGAATCACTCCTA  807

seq1  AGTGGAAGAATTC  858
      |||||||||||||
seq2  AGTGGAAGAATTC  820

seq1: chr13_67055947_67056259
seq2: B6Ng01-133M20.g_75_387

seq1  AGACTGTGGGCAGAGTAAGGAGTGTGGGCGCAGAGGACATTGGAGAGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTGGGCAGAGTAAGGAGTGTGGGCGCAGAGGACATTGGAGAGCTT  50

seq1  TCTTAGAAGGATGGAGTGATTGTATTTACTATTTGAAAAGGATTTCCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGAAGGATGGAGTGATTGTATTTACTATTTGAAAAGGATTTCCCTG  100

seq1  GTGCTACACAGTGCTTGCTTCACAAGCATAAGGAACTGAGTTCAGTCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTACACAGTGCTTGCTTCACAAGCATAAGGAACTGAGTTCAGTCCCT  150

seq1  AGCACCCCAAGCACTCACACCATTTGTGCTCTAGTACCTAGGGTTTCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCCCAAGCACTCACACCATTTGTGCTCTAGTACCTAGGGTTTCATA  200

seq1  GTACTTGCAGCTCAGCCTAGAACTCTAGCCTAAATATTTCTGTGTCATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTGCAGCTCAGCCTAGAACTCTAGCCTAAATATTTCTGTGTCATAG  250

seq1  ATCATTTCTATGGTAAAAGAATTATCTCACAAATTTTAAAAGGTTATAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTCTATGGTAAAAGAATTATCTCACAAATTTTAAAAGGTTATAGT  300

seq1  GGGGGGGGGGTGG  313
      |||||||||||||
seq2  GGGGGGGGGGTGG  313