BAC Information

Click to search

BAC

Clone NameB6Ng01-133N12
Chromosome13 (Build37)
Map Location 39,521,644 - 39,522,693
singlet/doubletsinglet
Overlap genenone
Upstream geneBmp6, Txndc5, Muted, Eef1e1, LOC621102, Slc35b3, EG666867
Downstream geneLOC100041779, LOC382747, A230103O09Rik, Ofcc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133N12.bB6Ng01-133N12.g
ACCDH934290DH934291
length1,2331,044
definitionDH934290|Mus musculus domesticus DNA, BAC clone: B6Ng01-133N12, 5' end.DH934291|Mus musculus domesticus DNA, BAC clone: B6Ng01-133N12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtagtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgaggtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctgcacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcggtgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttccttaatttctttcttcagagatttgaagttttttatcat
acagatctttcacttccttagttagagtcacgccagatattttatattat
ttgtgactattgagaaggtgttgtttccctatttctttctcagcctgtta
tctttgtatagaagaggccattgactgtttgagttattttatatccagct
actcacggaagctgtttatcagtttaggagtctctgtagaattttaaggc
cacttatatacattcaatcatcgcaaaagtgatttgacttccctttccaa
ttggatccttgatcatttgtgcctatgctcgcaacttcaagactatagtg
gcaatagtagtgaataaatagtggtgctcactg
gaattctgccctgagcattctactttcctggaaaattataaaggtgaatt
ctcttctctttttcctctaatgatggggaaaaaatgaagcaaaagaagca
atggacagggaaagaaatgcagaaaagaaatagaatacccaaaatgctat
atgataaaattgaacagaagtaaatttgatgaatttattttataattaaa
gcaagtggcagaaggcctttctagtatacaaggctttactctcctgcaaa
tattttcataatctattctaagattcataactcaatattttaatatcaca
aaattcataattcctttttctttacaaccctacagttcaaagcgttttta
aatggctacgccctgatctgataagattgttttcagtagcttacacagtg
taattgaagatggtcatttctactgcgtaaatatagatttttttttttta
ctgttcaaagaatagaaaaaatactgatgtcaataaagaaatcactgctc
tgttaaattcttaacggtgtctgttaaacacacacacacacacacacaca
cacacagccatggtgaaattttgatgggttttgggagtctgatatgaagt
gaactttctgactgcaagtttgattcggaacaggcagtggggataccgtc
agaattcagagtaatatgcaagaaagagaggtaaggggcccgaggtgaag
ggtggactggaagccaacctcacagagtaaacagatgtatttattcattg
tttttctgtattttctgtattcattttatttttccggaagtttgaaccca
gggcttcatgcctgctaagcctagaaccactgaggttcactttcagatct
tacgctttttacagacacctcttacccacaccagaaaagagagttcaaaa
tttaaagcaacctaatcttcttaaaagtgagaattgctcacaaattaaat
caatcgtagtccaatgacagtacaaatgactttgggagtctatctgtatc
taaaacatattttatatcaccatattcttacctatgtcatcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_39521644_39522693
seq2: B6Ng01-133N12.g_70_1113

seq1  GAATTCTGCCCTGAGCATTCTACTTTCCTGGAAAATTATAAAGGTGAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCCCTGAGCATTCTACTTTCCTGGAAAATTATAAAGGTGAATT  50

seq1  CTCTTCTCTTTTTCCTCTAATGATGGGGAAAAAATGAAGCAAAAGAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTCTTTTTCCTCTAATGATGGGGAAAAAATGAAGCAAAAGAAGCA  100

seq1  ATGGACAGGGAAAGAAATGCAGAAAAGAAATAGAATACCCAAAATGCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACAGGGAAAGAAATGCAGAAAAGAAATAGAATACCCAAAATGCTAT  150

seq1  ATGATAAAATTGAACAGAAGTAAATTTGATGAATTTATTTTATAATTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAAAATTGAACAGAAGTAAATTTGATGAATTTATTTTATAATTAAA  200

seq1  GCAAGTGGCAGAAGGCCTTTCTAGTATACAAGGCTTTACTCTCCTGCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTGGCAGAAGGCCTTTCTAGTATACAAGGCTTTACTCTCCTGCAAA  250

seq1  TATTTTCATAATCTATTCTAAGATTCATAACTCAATATTTTAATATCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCATAATCTATTCTAAGATTCATAACTCAATATTTTAATATCACA  300

seq1  AAATTCATAATTCCTTTTTCTTTACAACCCTACAGTTCAAAGCGTTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCATAATTCCTTTTTCTTTACAACCCTACAGTTCAAAGCGTTTTTA  350

seq1  AATGGCTACGCCCTGATCTGATAAGATTGTTTTCAGTAGCTTACACAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTACGCCCTGATCTGATAAGATTGTTTTCAGTAGCTTACACAGTG  400

seq1  TAATTGAAGATGGTCATTTCTACTGCGTAAATATAGATTTTTTTTTTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGAAGATGGTCATTTCTACTGCGTAAATATAGATTTTTTTTTTTTA  450

seq1  CTGTTCAAAGAATAGAAAAAATACTGATGTCAATAAAGAAATCACTGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCAAAGAATAGAAAAAATACTGATGTCAATAAAGAAATCACTGCTC  500

seq1  TGTTAAATTCTTAACGGTGTCTGTTAAACACACACACACACACACACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAATTCTTAACGGTGTCTGTTAAACACACACACACACACACACACA  550

seq1  CACACAGCCATGGTGAAATTTTGATGGGTTTTGGGAGTCTGATATGAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGCCATGGTGAAATTTTGATGGGTTTTGGGAGTCTGATATGAAGT  600

seq1  GAACTTTCTGACTGCAAGTTTGATTCGGAACAGGCAGTGGGGATACCGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTCTGACTGCAAGTTTGATTCGGAACAGGCAGTGGGGATACCGTC  650

seq1  AGAATTCAGAGTAATATGCAAGAAAGAGAGGTAAGGGGCCCGAGGTGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCAGAGTAATATGCAAGAAAGAGAGGTAAGGGGCCCGAGGTGAAG  700

seq1  GGTGGACTGGAAGCCAACCTCACAGAGTAAACAGATGTATTTATTCATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGACTGGAAGCCAACCTCACAGAGTAAACAGATGTATTTATTCATTG  750

seq1  -TTTTCTGTA-TTTCTGTATTCA-TTTATTTTTCCGGAAGTTTGAACCCA  797
       ||||||||| |||||||||||| ||||||||||||||||||||||||||
seq2  TTTTTCTGTATTTTCTGTATTCATTTTATTTTTCCGGAAGTTTGAACCCA  800

seq1  GGGCTTCATGCCTGCTAAGCCTAGAACCACTGAGGTTCACTTCCAGATCT  847
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GGGCTTCATGCCTGCTAAGCCTAGAACCACTGAGGTTCACTTTCAGATCT  850

seq1  TACGCTTTTTACAGACACCTCTTACCCACACCAGAAAAGAGAGTTCAAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGCTTTTTACAGACACCTCTTACCCACACCAGAAAAGAGAGTTCAAAA  900

seq1  TTTAAAGCAACCTAAATCTTCTTAAAAGTGAGAATTGCTCACAAATTAAA  947
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGCAACCT-AATCTTCTTAAAAGTGAGAATTGCTCACAAATTAAA  949

seq1  TCAATCGTAGTCCAATGACCAGTACAAAATGACTTTGGGAGTCTTATCTG  997
      |||||||||||||||||| |||||| ||||||||||||||||| ||||||
seq2  TCAATCGTAGTCCAATGA-CAGTAC-AAATGACTTTGGGAGTC-TATCTG  996

seq1  TAATCTAAAAACATAATTTCTATATTCACCATATTCTTACCTATGTCATC  1047
      | |||| |||||||| ||| ||   |||||||||||||||||||||||||
seq2  T-ATCT-AAAACATATTTTATA---TCACCATATTCTTACCTATGTCATC  1041

seq1  TTT  1050
      |||
seq2  TTT  1044