BAC Information

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BAC

Clone NameB6Ng01-134A18
Chromosome13 (Build37)
Map Location 17,428,659 - 17,429,815
singlet/doubletsinglet
Overlap gene5033411D12Rik
Upstream geneLOC665191
Downstream gene2810021B07Rik, Cdc2l5, Rala, LOC434585, LOC382732, 1600012F09Rik, Vdac3-ps1, LOC625310, 4930448F12Rik, Pou6f2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134A18.bB6Ng01-134A18.g
ACCDH934443DH934444
length1,2211,145
definitionDH934443|Mus musculus domesticus DNA, BAC clone: B6Ng01-134A18, 5' end.DH934444|Mus musculus domesticus DNA, BAC clone: B6Ng01-134A18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgttgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcgtttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctattctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtaaattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaattctttcttcagagatttgaagttttatcataca
gatcttcacctccttagttagagtcacgccagatatttttatattatttg
tgactatgagaaggtgtgtttcccttacttctgtctcagcctgtttatct
ttgtaagagaaaggccattgactgttcgagttcatttatattcagctact
caccggagcagtttattcaggttaagaggttccttgggagagcttaggta
ccttagaataacatgcgattagtctgccagagtattttggactgcccttc
caatggatcatggatcttgtggtcgaatggacggctaatctcagatacag
atgatgaaaagtgagcggaga
gaattcactggcagtaaccatctctctttaacttccctcttatatcccaa
acatagtatgacactcatggctttacaccatacatgccataccgaaaaat
atcacaggggacaagaagcctaaactgacctgagactcacgggaagggtg
tactgagcagaaatttattcaagcagtcacagcattttaccagcagctaa
agactcaagacttagaataagaataccttaaagaaatttgtggaattgat
tggcaacgttttcaagcatgaattaactccacatttattagttaaaaaaa
aatcaaaaaagcaagaatcaggagataaaaaacaaacaaacaaacaaaaa
accaaaaaacaatgttagacctgtgcaggcctagatgacagctaaatttc
accccagggcaatttgagtaaccacaattatggaaaacagtgattcagat
atagtatgagggtgtagaaaggaatatgttcaaaacctgccagaatagta
tgtgaaatgcctatttcgttgtagattagcctataagagatatggtaact
ataggggcccgactatagactcggagctttgctccagactttacataggg
gattgtgatcacaggggtaaaatggtttggcaagaatatagaatttagcc
tagacaaacaaaaacaacaaacagaaaatataggagaagcaaaagccaag
tgctcacaacagacattgtgaagaaggagactgatggttagtacatgtaa
gtttgtgaacaacaggcaagagcacactccatttctgtttcttttatatg
gccaaggagaacttccacagtgtttttgcagaatgtgtgctgtgttggtg
gaatctttgtctttgccattctgtacagtgccttgtagtggacaaagaat
ccagaaatgtaagcaattatagatcatttggtcaaaggatatctctaaca
tttcattattgaagagagttacctttctagatacatgtctggtgacagta
caggctgaaatttgctgttcgagtcaatgagttatgctcttcaacatgac
atgcatgaaagaccatgcttggtactatttgaactggcattcttctaaac
aggcagagaagagattggaaacgagtagtccagagatgtttactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_17428659_17429815
seq2: B6Ng01-134A18.g_66_1210

seq1  GAATTCACTGGCAGTAACCATCTCTCTTTAACTTCCCTCTTATATCCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGGCAGTAACCATCTCTCTTTAACTTCCCTCTTATATCCCAA  50

seq1  ACATAGTATGACACTCATGGCTTTACACCATACATGCCATACCGAAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGTATGACACTCATGGCTTTACACCATACATGCCATACCGAAAAAT  100

seq1  ATCACAGGGGACAAGAAGCCTAAACTGACCTGAGACTCACGGGAAGGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGGGGACAAGAAGCCTAAACTGACCTGAGACTCACGGGAAGGGTG  150

seq1  TACTGAGCAGAAATTTATTCAAGCAGTCACAGCATTTTACCAGCAGCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGCAGAAATTTATTCAAGCAGTCACAGCATTTTACCAGCAGCTAA  200

seq1  AGACTCAAGACTTAGAATAAGAATACCTTAAAGAAATTTGTGGAATTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCAAGACTTAGAATAAGAATACCTTAAAGAAATTTGTGGAATTGAT  250

seq1  TGGCAACGTTTTCAAGCATGAATTAACTCCACATTTATTAGTTAAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAACGTTTTCAAGCATGAATTAACTCCACATTTATTAGTTAAAAAAA  300

seq1  AATCAAAAAAGCAAGAATCAGGAGATAAAAAACAAACAAACAAACAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAAAAAGCAAGAATCAGGAGATAAAAAACAAACAAACAAACAAAAA  350

seq1  ACCAAAAAACAATGTTAGACCTGTGCAGGCCTAGATGACAGCTAAATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAAAACAATGTTAGACCTGTGCAGGCCTAGATGACAGCTAAATTTC  400

seq1  ACCCCAGGGCAATTTGAGTAACCACAATTATGGAAAACAGTGATTCAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAGGGCAATTTGAGTAACCACAATTATGGAAAACAGTGATTCAGAT  450

seq1  ATAGTATGAGGGTGTAGAAAGGAATATGTTCAAAACCTGCCAGAATAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTATGAGGGTGTAGAAAGGAATATGTTCAAAACCTGCCAGAATAGTA  500

seq1  TGTGAAATGCCTATTTCGTTGTAGATTAGCCTATAAGAGATATGGTAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAATGCCTATTTCGTTGTAGATTAGCCTATAAGAGATATGGTAACT  550

seq1  ATAGGGGCCCGACTATAGACTCGGAGCTTTGCTCCAGACTTTACATAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGGCCCGACTATAGACTCGGAGCTTTGCTCCAGACTTTACATAGGG  600

seq1  GATTGTGATCACAGGGGTAAAATGGTTTGGCAAGAATATAGAATTTAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTGATCACAGGGGTAAAATGGTTTGGCAAGAATATAGAATTTAGCC  650

seq1  TAGACAAACAAAAACAACAAACAGAAAATATAGGAGAAGCAAAAGCCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAAACAAAAACAACAAACAGAAAATATAGGAGAAGCAAAAGCCAAG  700

seq1  TGCTCACAACAGACATTGTGAAGAAGGAGACTGATGGTTAGTACATGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCACAACAGACATTGTGAAGAAGGAGACTGATGGTTAGTACATGTAA  750

seq1  GTTTGTGAACAACAGGCAAGAGCACACTCCATTTCTGTTTCTTTTATATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGAACAACAGGCAAGAGCACACTCCATTTCTGTTTCTTTTATATG  800

seq1  GCCAAGGAGAACTTCCACAGTGTTTTTGCAGAATGTGTGCTGTGTTTGGT  850
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GCCAAGGAGAACTTCCACAGTGTTTTTGCAGAATGTGTGCTGTG-TTGGT  849

seq1  GGAATCTTTTGTCTTTGCCATTCTGTACAGTGCCTTGTAGTGGACAAAGA  900
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATC-TTTGTCTTTGCCATTCTGTACAGTGCCTTGTAGTGGACAAAGA  898

seq1  ATCCAGAAAATGTAAAGCAATTATAGATCAATTTGGTCAAAGGATAATCT  950
      |||||| |||||| ||||||||||||||| ||||||||||||||| ||||
seq2  ATCCAG-AAATGT-AAGCAATTATAGATC-ATTTGGTCAAAGGAT-ATCT  944

seq1  CTAAACATTTCATTATTGAAGAGAGTTACCTTTCTAAGAATACATGTCTG  1000
      || |||||||||||||||||||||||||||||||||   |||||||||||
seq2  CT-AACATTTCATTATTGAAGAGAGTTACCTTTCTA--GATACATGTCTG  991

seq1  GTGTACAGTACAGGCTGAAATTTTGCTGTTCGAGTCATTGAGTTATGCTC  1050
      ||| |||||||||||||||| |||||||||||||||| ||||||||||||
seq2  GTG-ACAGTACAGGCTGAAA-TTTGCTGTTCGAGTCAATGAGTTATGCTC  1039

seq1  TTCAACAATGACATGCATGAAAGACACATACTTGGTAC-ATTTG-ACTTG  1098
      |||||| |||||||||||||||||| ||| |||||||| ||||| ||| |
seq2  TTCAAC-ATGACATGCATGAAAGAC-CATGCTTGGTACTATTTGAACTGG  1087

seq1  CATGTCTTCTAAAACAGCAAGAGA--AGATTTAGAACGAGTAGTCCAGAA  1146
      ||| |||||| ||||||  |||||  |||||   ||||||||||||||| 
seq2  CAT-TCTTCT-AAACAGGCAGAGAAGAGATTGGAAACGAGTAGTCCAGAG  1135

seq1  ATTGTTTACTC  1157
      | |||||||||
seq2  A-TGTTTACTC  1145