BAC Information

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BAC

Clone NameB6Ng01-134H10
Chromosome13 (Build37)
Map Location 34,932,161 - 35,034,816
singlet/doubletdoublet
Overlap geneLOC666677, Prpf4b, 4933417A18Rik, LOC666697
Upstream geneOTTMUSG00000000720, Serpinb6c, Serpinb6a, Nqo2, 4930482L21Rik, Ripk1, Bphl, Tubb2a, LOC100042686, Tubb2b, 2310047M15Rik, 3110004L20Rik, LOC620132, EG666666, 1300014I06Rik, D0H6S2654E, EG432746
Downstream gene1810022C23Rik, Peci, Cdyl, Rpp40
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134H10.bB6Ng01-134H10.g
ACCDH934754DH934755
length1,037687
definitionDH934754|Mus musculus domesticus DNA, BAC clone: B6Ng01-134H10, 5' end.DH934755|Mus musculus domesticus DNA, BAC clone: B6Ng01-134H10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,034,001 - 35,034,816)(34,932,161 - 34,932,845)
sequence
gaattcactgtgccaagtgaaatagccaaacctaaaagaacaagtataat
tccacttacctgaaacacattgaatgggcacgtttataggctgggaaaaa
ataatagttgccaagtgccataaagatattgaactcgggtattgttattt
tacgagtatagaaattcagttggtgactcaagggattgtcaatattggtg
acagaatattggtgcaaatggactcagggccactgatctgtacacaaaga
catgcttcaatgacaaatttaaagctttatagtttttactgtagttaaaa
tatctttacaaaatcagtaacaagaaaattgggaacatgactcattcaat
agacagagggaaagcattggacaaaattcagcactgagtcatgataacaa
ttacaaagacagcaacagtagagagcttactgaactactaaagggaattt
acagagacttacagtgaaccttttattgatttttccacctcagaatgaga
aaaaaatagcaaggatgcatacttctgccacattgtattggagaccttgg
cttttgtaataaagtaaggggtaaaaggattaaaaatagaaaattaaaac
ataaaaatgcccctgcataatttgcagtgaattatacgatccagcaatct
cacttgtgggcatttatccaaaagaaatgaaatcagttatctctctatat
atagattttatagttctaatcctgtgtgcattataacactgttcacaaaa
aaataagatattttcctgtcttctgacgtggattttttttatggcttcta
ctccatggtttcaggtgcatttcttcgaggtttggtccttggagattttt
tttctttttggtgggtacagtgaacttttattgatggtattcaagaaagt
agagagggctccctaagccctcctgttattatggggggtctgggatgaaa
attgtgaggagatcagtggccctgagtcctcagtgtagcccaggatgacc
tttagtgggcccttggaagcctgcttcaccattttct
gaattcctcccatatgtagtggttatatttatacccagagaaacgggagt
gacttagggaaataatctgattggctccattcagaccttcatgccctata
tgggcatggtgtgatcaagtggcagcctgtgattggctgaagctagactt
ttgtctagaatgaattatctgctgcaagaacacacttctaagttagctta
cagggtgtttgtttgtttgtttattttaacacaccaaggttacagtttat
tacatacagaggcagatttcggccacgttttaatctagatacagacccaa
gccaaacatcactttaacactgtcagaaaataaacaaataaataattgag
agaaagaacttagattaggaaatacgtttttggctcactatctcagaagt
ccaagtccatgttcacttgactttgttgcttcttggtctgtggtgaggta
gaacatcatggtggtgagaacatgaagagaaggaggggagtgagggggag
gaggctgatcatcttatagaggcaaggaagcagagaaagaaaagggaaac
agtggaggataatttgtacactctttccaggtcatgctttccagtaactc
ccaccagtcaggctctgctttctatagttctaccaactctcacagtctgt
tcacagtcttcaatccatttatgatatcccaccgcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_35034001_35034816
seq2: B6Ng01-134H10.b_46_861 (reverse)

seq1  ACCTGAAACCATGGAGTAGAAGCCATAAAAAAAATCCACGTCAGAAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAAACCATGGAGTAGAAGCCATAAAAAAAATCCACGTCAGAAGACA  50

seq1  GGAAAATATCTTATTTTTTTGTGAACAGTGTTATAATGCACACAGGATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATATCTTATTTTTTTGTGAACAGTGTTATAATGCACACAGGATTA  100

seq1  GAACTATAAAATCTATATATAGAGAGATAACTGATTTCATTTCTTTTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTATAAAATCTATATATAGAGAGATAACTGATTTCATTTCTTTTGGA  150

seq1  TAAATGCCCACAAGTGAGATTGCTGGATCGTATAATTCACTGCAAATTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCCCACAAGTGAGATTGCTGGATCGTATAATTCACTGCAAATTAT  200

seq1  GCAGGGGCATTTTTATGTTTTAATTTTCTATTTTTAATCCTTTTACCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGGCATTTTTATGTTTTAATTTTCTATTTTTAATCCTTTTACCCCT  250

seq1  TACTTTATTACAAAAGCCAAGGTCTCCAATACAATGTGGCAGAAGTATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTATTACAAAAGCCAAGGTCTCCAATACAATGTGGCAGAAGTATGC  300

seq1  ATCCTTGCTATTTTTTTCTCATTCTGAGGTGGAAAAATCAATAAAAGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGCTATTTTTTTCTCATTCTGAGGTGGAAAAATCAATAAAAGGTT  350

seq1  CACTGTAAGTCTCTGTAAATTCCCTTTAGTAGTTCAGTAAGCTCTCTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTAAGTCTCTGTAAATTCCCTTTAGTAGTTCAGTAAGCTCTCTACT  400

seq1  GTTGCTGTCTTTGTAATTGTTATCATGACTCAGTGCTGAATTTTGTCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTGTCTTTGTAATTGTTATCATGACTCAGTGCTGAATTTTGTCCAA  450

seq1  TGCTTTCCCTCTGTCTATTGAATGAGTCATGTTCCCAATTTTCTTGTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCCCTCTGTCTATTGAATGAGTCATGTTCCCAATTTTCTTGTTAC  500

seq1  TGATTTTGTAAAGATATTTTAACTACAGTAAAAACTATAAAGCTTTAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTGTAAAGATATTTTAACTACAGTAAAAACTATAAAGCTTTAAAT  550

seq1  TTGTCATTGAAGCATGTCTTTGTGTACAGATCAGTGGCCCTGAGTCCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATTGAAGCATGTCTTTGTGTACAGATCAGTGGCCCTGAGTCCATT  600

seq1  TGCACCAATATTCTGTCACCAATATTGACAATCCCTTGAGTCACCAACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCAATATTCTGTCACCAATATTGACAATCCCTTGAGTCACCAACTG  650

seq1  AATTTCTATACTCGTAAAATAACAATACCCGAGTTCAATATCTTTATGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTATACTCGTAAAATAACAATACCCGAGTTCAATATCTTTATGGC  700

seq1  ACTTGGCAACTATTATTTTTTCCCAGCCTATAAACGTGCCCATTCAATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGCAACTATTATTTTTTCCCAGCCTATAAACGTGCCCATTCAATGT  750

seq1  GTTTCAGGTAAGTGGAATTATACTTGTTCTTTTAGGTTTGGCTATTTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGGTAAGTGGAATTATACTTGTTCTTTTAGGTTTGGCTATTTCAC  800

seq1  TTGGCACAGTGAATTC  816
      ||||||||||||||||
seq2  TTGGCACAGTGAATTC  816

seq1: chr13_34932161_34932845
seq2: B6Ng01-134H10.g_65_751

seq1  GAATTCCTCCCATATGTAGTGGTTATATTTATACCCAGAGAAACGGGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCCATATGTAGTGGTTATATTTATACCCAGAGAAACGGGAGT  50

seq1  GACTTAGGGAAATAATCTGATTGGCTCCATTCAGACCTTCATGCCCTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAGGGAAATAATCTGATTGGCTCCATTCAGACCTTCATGCCCTATA  100

seq1  TGGGCATGGTGTGATCAAGTGGCAGCCTGTGATTGGCTGAAGCTAGACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCATGGTGTGATCAAGTGGCAGCCTGTGATTGGCTGAAGCTAGACTT  150

seq1  TTGTCTAGAATGAATTATCTGCTGCAAGAACACACTTCTAAGTTAGCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTAGAATGAATTATCTGCTGCAAGAACACACTTCTAAGTTAGCTTA  200

seq1  CAGGGTGTTTGTTTGTTTGTTTATTTTAACACACCAAGGTTACAGTTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTGTTTGTTTGTTTGTTTATTTTAACACACCAAGGTTACAGTTTAT  250

seq1  TACATACAGAGGCAGATTTCGGCCACGTTTTAATCTAGATACAGACCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACAGAGGCAGATTTCGGCCACGTTTTAATCTAGATACAGACCCAA  300

seq1  GCCAAACATCACTTTAACACTGTCAGAAAATAAACAAATAAATAATTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAACATCACTTTAACACTGTCAGAAAATAAACAAATAAATAATTGAG  350

seq1  AGAAAGAACTTAGATTAGGAAATACGTTTTTGGCTCACTATCTCAGAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAACTTAGATTAGGAAATACGTTTTTGGCTCACTATCTCAGAAGT  400

seq1  CCAAGTCCATGTTCACTTGACTTTGTTGCTTCTTGGTCTGTGGTGAGGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTCCATGTTCACTTGACTTTGTTGCTTCTTGGTCTGTGGTGAGGTA  450

seq1  GAACATCATGGTGGTGAGAACATGAAGAGAAGGAGGGGAGTGAGGGGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATCATGGTGGTGAGAACATGAAGAGAAGGAGGGGAGTGAGGGGGAG  500

seq1  GAGGCTGATCATCTTATAGAGGCAAGGAAGCAGAGAAAGAAAAGGGAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGATCATCTTATAGAGGCAAGGAAGCAGAGAAAGAAAAGGGAAAC  550

seq1  AGTGGAGGATAA-TTGTACACTCTTTCCAGGTCATGC-TTCCAGTAACTC  598
      |||||||||||| |||||||||||||||||||||||| ||||||||||||
seq2  AGTGGAGGATAATTTGTACACTCTTTCCAGGTCATGCTTTCCAGTAACTC  600

seq1  CCACCAGTCAGGCTCTGCTTTCTATAGTTCTACCAACTCTCACAGTCTGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAGTCAGGCTCTGCTTTCTATAGTTCTACCAACTCTCACAGTCTGT  650

seq1  TCACAGTCTTCAATCCATTAATGATATCCCACCGCTA  685
      ||||||||||||||||||| |||||||||||||||||
seq2  TCACAGTCTTCAATCCATTTATGATATCCCACCGCTA  687