BAC Information

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BAC

Clone NameB6Ng01-135K23
Chromosome13 (Build37)3 (Build37)
Map Location 8,668,074 - 8,669,012106,220,191 - 106,220,706
singlet/doubletsingletsinglet
Overlap geneAdarb2
Upstream geneLOC791083, LOC382722, EG666941
Downstream geneWdr37, LOC100039632, Idi1, EG382723, LOC100039655, Idi2, Gtpbp4, LOC667721, Larp5, EG667727, LOC100039719, Dip2c, LOC666986
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135K23.bB6Ng01-135K23.g
ACCDH935660DH935661
length9381,015
definitionDH935660|Mus musculus domesticus DNA, BAC clone: B6Ng01-135K23, 5' end.DH935661|Mus musculus domesticus DNA, BAC clone: B6Ng01-135K23, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(8,668,074 - 8,669,012)(106,220,191 - 106,220,706)
sequence
gaattcctctacactgtggcattgagccttctcaggaccaagggcctctc
ttcccattgatgtccaacaaggccatcctctgctacacatgcagctggag
ccatgggcccctccatgtgtactctctggttggtggtttagtccctggga
gctctgccaccctccttggtgattgatagtgaggagcagggtctgcttag
aaggctgctacctagtctgcaacccaggacatgcacacatggccgtgagg
ctgtgatcggaacagttccttcacttctttcagtgaagagttgaactgtc
caaaacaaattgtgaatttaatgtgaaatgaacccccatacactcctatg
taaaatacttggtcctgaagagctggggcctttctggagggagcggaata
cctcgggcaggctttgaaggtttttacagcctggccccatgtcctatatg
ttcccttctttcagattgtgggcacaacacttgttctgccatgcctcctc
ccaccataatgaaccatagtttttagaactaaaatctgaaataaacctct
tctcccttaaagtcacaacagtaagaataataggtcatgcctgtgaagga
aaaattagctaccctccctccacagcctgaagtgtaagaacggtggcaga
gcacagcagcagggccgatgtccccaagacacaggcaataactcagagga
taagatggagtttcatggcagagtcttgaagcaacttaagggagaaaggg
tttgacttgccttacagttccaccacagcagggaaggcatgaactgtgag
ccagttaccgtactgagtctacagtcaagaagcagagaaaggacaggaga
tggaatcacattataaaaccccaaggcctactcctagtggcaaactgggt
ctctggacactagagcagggtgggagtggggtggggga
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgagagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttctcttgtttccacttgggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttcctttttttctaggg
cttttagatgttgttgtcaagctgctagtatgtgctgtctccgtttcttc
ttggaggactcagcgctattgagtttccctctaaaatgccttcattgggg
tcccaaaggtttggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_8668074_8669012
seq2: B6Ng01-135K23.b_47_984

seq1  GAATTCCTCTACACTGTGGCATTGAGCCTTCTCAGGACCAAGGGCCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTACACTGTGGCATTGAGCCTTCTCAGGACCAAGGGCCTCTC  50

seq1  TTCCCATTGATGTCCAACAAGGCCATCCTCTGCTACACATGCAGCTGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCATTGATGTCCAACAAGGCCATCCTCTGCTACACATGCAGCTGGAG  100

seq1  CCATGGGCCCCTCCATGTGTACTCTCTGGTTGGTGGTTTAGTCCCTGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGGCCCCTCCATGTGTACTCTCTGGTTGGTGGTTTAGTCCCTGGGA  150

seq1  GCTCTGCCACCCTCCTTGGTGATTGATAGTGAGGAGCAGGGTCTGCTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCCACCCTCCTTGGTGATTGATAGTGAGGAGCAGGGTCTGCTTAG  200

seq1  AAGGCTGCTACCTAGTCTGCAACCCAGGACATGCACACATGGCCGTGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGCTACCTAGTCTGCAACCCAGGACATGCACACATGGCCGTGAGG  250

seq1  CTGTGATCGGAACAGTTCCTTCACTTCTTTCAGTGAAGAGTTGAACTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATCGGAACAGTTCCTTCACTTCTTTCAGTGAAGAGTTGAACTGTC  300

seq1  CAAAACAAATTGTGAATTTAATGTGAAATGAACCCCCATACACTCCTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAATTGTGAATTTAATGTGAAATGAACCCCCATACACTCCTATG  350

seq1  TAAAATACTTGGTCCTGAAGAGCTGGGGCCTTTCTGGAGGGAGCGGAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATACTTGGTCCTGAAGAGCTGGGGCCTTTCTGGAGGGAGCGGAATA  400

seq1  CCTCGGGCAGGCTTTGAAGGTTTTTACAGCCTGGCCCCATGTCCTATATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGGGCAGGCTTTGAAGGTTTTTACAGCCTGGCCCCATGTCCTATATG  450

seq1  TTCCCTTCTTTCAGATTGTGGGCACAACACTTGTTCTGCCATGCCTCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTCTTTCAGATTGTGGGCACAACACTTGTTCTGCCATGCCTCCTC  500

seq1  CCACCATAATGAACCATAGTTTTTAGAACTAAAATCTGAAATAAACCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATAATGAACCATAGTTTTTAGAACTAAAATCTGAAATAAACCTCT  550

seq1  TCTCCCTTAAAGTCACAACAGTAAGAATAATAGGTCATGCCTGTGAAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTTAAAGTCACAACAGTAAGAATAATAGGTCATGCCTGTGAAGGA  600

seq1  AAAATTAGCTACCCTCCCTCCACAGCCTGAAGTGTAAGAACGGTGGCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAGCTACCCTCCCTCCACAGCCTGAAGTGTAAGAACGGTGGCAGA  650

seq1  GCACAGCAGCAGGGCCGATGTCCCCAAGACACAGGCAATAACTCAGAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGCAGCAGGGCCGATGTCCCCAAGACACAGGCAATAACTCAGAGGA  700

seq1  TAAGATGGAGTTTCATGGCAGAGTCTTGAAGCAACTTAAGGGAGAAAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATGGAGTTTCATGGCAGAGTCTTGAAGCAACTTAAGGGAGAAAGGG  750

seq1  TTTGACTTGCCTTACAGTTCCACCACAGCAGGGAAGGCATGAACTGTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTTGCCTTACAGTTCCACCACAGCAGGGAAGGCATGAACTGTGAG  800

seq1  CCAGTTACCGTACTGAGTCTACAGTCAAGAAGCAGAGAAAGGACAGGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTACCGTACTGAGTCTACAGTCAAGAAGCAGAGAAAGGACAGGAGA  850

seq1  TGGAATCACATTATAAAACCCCAAGGCCTACTCCTAGTGGCAAACTGGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATCACATTATAAAACCCCAAGGCCTACTCCTAGTGGCAAACTGGGT  900

seq1  CTCTGGACACTAGAGCAGGGGTGGGAGTGGGGTGGGGGA  939
      ||||||||||||||||| |||||||||||||||||||||
seq2  CTCTGGACACTAGAGCA-GGGTGGGAGTGGGGTGGGGGA  938

seq1: chr3_106220191_106220706
seq2: B6Ng01-135K23.g_568_1082 (reverse)

seq1  CCCAAACCTTTGGGA-CACAATGAAAGCATTTCTAAGAGGGAAACTC-AT  48
      ||||||||||||||| | ||||||| |||||  | |||||||||||| ||
seq2  CCCAAACCTTTGGGACCCCAATGAAGGCATT--TTAGAGGGAAACTCAAT  48

seq1  AGCTCTGAGTGCCTCCAAGAAGAAACGGGAGAGAGCACATACTAGCAGCT  98
      ||| |||||| ||||||||||||||| ||||| |||||||||||||||||
seq2  AGCGCTGAGT-CCTCCAAGAAGAAAC-GGAGACAGCACATACTAGCAGCT  96

seq1  TGACAAC-ACATCTAAAAGCTCTAGAAAAAAAGGAAGCAAATTCACCCAA  147
      ||||||| |||||||||||| |||||||||||||||||||||||||||||
seq2  TGACAACAACATCTAAAAGCCCTAGAAAAAAAGGAAGCAAATTCACCCAA  146

seq1  GAGGAGTAGACGGCAGGAAATAATCAAACTCAGGGGTGAAATCAA-CCAA  196
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAGGAGTAGACGGCAGGAAATAATCAAACTCAGGGGTGAAATCAACCCAA  196

seq1  GTGGAAACAAGAAGAACTATTCAAAGAATTAACCAAACGAGGAGTTGGTT  246
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAACAAG-AGAACTATTCAAAGAATTAACCAAACGAGGAGTTGGTT  245

seq1  CTTTGAGAAAATCAACAAGATAGATAAACCCTTAGCTAGACTCACTAGAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTTTGAGAAAATCAACAAGATAGATAAACCCTTAGCTAGACTCACTAAAG  295

seq1  GGCACAGAGACAAAATCCTAATTAACAAAATCAGAACTGAAAAGGGAGAC  346
      ||||||| |||||||||||||||||||||||||||| |||||||||||||
seq2  GGCACAGGGACAAAATCCTAATTAACAAAATCAGAAATGAAAAGGGAGAC  345

seq1  ATAACAACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTTCTACAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATAACAACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTTCTACAA  395

seq1  AAGGTTATACTCAACAAAACTGGAAAACCTGGACGAAATGGACAAATTTC  446
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTATACTCAACAAAACTGGAAAACCTGGACGAAATGGACAAATTTC  445

seq1  TGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCTTCTA  496
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCATCTA  495

seq1  AACAGTCCCATATCCCCTAA  516
      |||||||||||||| |||||
seq2  AACAGTCCCATATCACCTAA  515