BAC Information

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BAC

Clone NameB6Ng01-137L15
Chromosome13 (Build37)
Map Location 20,541,398 - 20,542,547
singlet/doubletsinglet
Overlap geneElmo1
Upstream geneEpdr1, Sfrp4, Txndc3, A530099J19Rik, Gpr141, LOC432730
Downstream geneLOC100040226, LOC665381, LOC665386, Aoah, Olfr1370, Olfr1369-ps1, Olfr42, Olfr1368, Trim27, Gpx5, LOC625752, Gpx6, Olfr1367, Zfp96, LOC665454, Zkscan3, Pgbd1, 4930470G03Rik, Zfp187
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137L15.bB6Ng01-137L15.g
ACCDH937165DH937166
length1,1421,127
definitionDH937165|Mus musculus domesticus DNA, BAC clone: B6Ng01-137L15, 5' end.DH937166|Mus musculus domesticus DNA, BAC clone: B6Ng01-137L15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaagaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaacagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgtggatgtggagaaagaggaatgctcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcgattcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaagacacatgctccactgt
gttcatagcagccctatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagtcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcattgataagtggatattagccccaaacc
taggatacccaagagataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtagacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagtcacagagacaaagtttggagctgagatga
aaggatggagagactgccatatccagggatccaccccataatcagcatcc
aaacgctgacaccattgtatacactagcaagattttatcgaaaggaccca
gatgtagctgtctcttgtgagactatgccggggcctagcaaacacagaag
tggatgctcacagtcagctaatggatggatcacagggcctcccatggagg
agctagaaaaagtacccagagctaaagggatctgcaaccctataggtgga
acaaattatgactaacagtaccttggagttcttgactctagctgcatatg
tatcaagatgcctagtggcatcactgtagaagccatggactgcaacttat
gccagtacagggaacaccaggccaaagggagatgtgtggtag
gaattcttctgcatttgcattcaactcctgaacaaaacatggaaggaaat
gagggcaacatctgaagacttcaacaaggtaacgggtgtggtcacccgcc
atctgacaggtctggggctcacgcctcagatgtggtatactatgttccct
cagctgtgcatagaagcagtgttcgagggaagagaaggaaaggagtgtga
ttttaaatcgcacccaaaatggaagcaaccactaggtatctgcttggggt
cgctttggcccctttgtctcagccaaggccaccaactgagaacctttctg
gagaaactctcctggtgattttttcctttgtggttttggtatgggatgct
ttgtcactggtttgaggctattaagtaaggcgtcatccctctatctgtgt
agaagacaaatggagagccagccaatacagaagacaactggctggtccat
tggtatgtttgtgtagtatggacaccttaagttcatatgactgcttctat
gtccaaataacaattatttctatgatggaggttctctctctctctctctc
tctctctctctctctcatctctatctctttctctatctctatctctatct
ctatctctatctctatctctatctctatctctatctatctctatagggtt
atatggaccatttcagaggacagcttgcctgagtagtcagttctttgctt
taattgtgttggttccaggtcttgaactcaggttgctaggcttagtggca
gatgctttaccctctcggccacctcaccagcatttgtttgttcttcccat
tgtcattacttgtgggaatatgactttcctgctgcgatagatgtgagatt
tccgggtcaacttagaggagtttgaaacagagtctctacttttagagatt
aggaacatatttctctttgcaacagacatgtataaacagtaatggctaat
tatgtctagttttagggtctggacagtattagtttagcctgtaaccgttg
tacatgactctaacagctccagccctttgcttaacccctcctctggtcta
agaatcatacttctagatttgggtgctactttcgtggcttggaatagaaa
atctaacttcactcattttctcctgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_20541398_20542547
seq2: B6Ng01-137L15.g_67_1193

seq1  GAATTCTTCTGCATTTGCATTCAACTCCTGAACAAAACATGGAAGGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGCATTTGCATTCAACTCCTGAACAAAACATGGAAGGAAAT  50

seq1  GAGGGCAACATCTGAAGACTTCAACAAGGTAACGGGTGTGGTCACCCGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCAACATCTGAAGACTTCAACAAGGTAACGGGTGTGGTCACCCGCC  100

seq1  ATCTGACAGGTCTGGGGCTCACGCCTCAGATGTGGTATACTATGTTCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGACAGGTCTGGGGCTCACGCCTCAGATGTGGTATACTATGTTCCCT  150

seq1  CAGCTGTGCATAGAAGCAGTGTTCGAGGGAAGAGAAGGAAAGGAGTGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTGCATAGAAGCAGTGTTCGAGGGAAGAGAAGGAAAGGAGTGTGA  200

seq1  TTTTAAATCGCACCCAAAATGGAAGCAACCACTAGGTATCTGCTTGGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATCGCACCCAAAATGGAAGCAACCACTAGGTATCTGCTTGGGGT  250

seq1  CGCTTTGGCCCCTTTGTCTCAGCCAAGGCCACCAACTGAGAACCTTTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTTGGCCCCTTTGTCTCAGCCAAGGCCACCAACTGAGAACCTTTCTG  300

seq1  GAGAAACTCTCCTGGTGATTTTTTCCTTTGTGGTTTTGGTATGGGATGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACTCTCCTGGTGATTTTTTCCTTTGTGGTTTTGGTATGGGATGCT  350

seq1  TTGTCACTGGTTTGAGGCTATTAAGTAAGGCGTCATCCCTCTATCTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACTGGTTTGAGGCTATTAAGTAAGGCGTCATCCCTCTATCTGTGT  400

seq1  AGAAGACAAATGGAGAGCCAGCCAATACAGAAGACAACTGGCTGGTCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACAAATGGAGAGCCAGCCAATACAGAAGACAACTGGCTGGTCCAT  450

seq1  TGGTATGTTTGTGTAGTATGGACACCTTAAGTTCATATGACTGCTTCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATGTTTGTGTAGTATGGACACCTTAAGTTCATATGACTGCTTCTAT  500

seq1  GTCCAAATAACAATTATTTCTATGATGGAGGTTCTCTCTCTCTCTCTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAATAACAATTATTTCTATGATGGAGGTTCTCTCTCTCTCTCTCTC  550

seq1  TCTCTCTCTCTCTCTCATCTCTATCTCTTTCTCTATCTCTATCTCTATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCATCTCTATCTCTTTCTCTATCTCTATCTCTATCT  600

seq1  CTATCTCTATCTCTATCTCTATCTCTATCTCTATCTATCTCTATAGGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTCTATCTCTATCTCTATCTCTATCTCTATCTATCTCTATAGGGTT  650

seq1  ATATGGACCATTTCAGAGGACAGCTTGCCTGAGTAGTCAGTTCTTTGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGACCATTTCAGAGGACAGCTTGCCTGAGTAGTCAGTTCTTTGCTT  700

seq1  TAATTGTGTTGGTTCCAGGTCTTGAACTCAGGTTGCTAGGCTTAGTGGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGTGTTGGTTCCAGGTCTTGAACTCAGGTTGCTAGGCTTAGTGGCA  750

seq1  GATGCTTTTACCCTCTCGGCCACCTCACCAGCATTTGTTTGTTCTT-CCA  799
      ||||| |||||||||||||||||||||||||||||||||||||||| |||
seq2  GATGC-TTTACCCTCTCGGCCACCTCACCAGCATTTGTTTGTTCTTCCCA  799

seq1  TTGTCATTACTTGTGGGAATATGACTTTCCTGCTGCGATAGATGTGAGAA  849
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTGTCATTACTTGTGGGAATATGACTTTCCTGCTGCGATAGATGTGAG-A  848

seq1  TTTCCGGGTCAACTTAGAGGAGTTTGAAACAGAGTCCCTACTTTTAGAGA  899
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTTCCGGGTCAACTTAGAGGAGTTTGAAACAGAGTCTCTACTTTTAGAGA  898

seq1  TTAAGAACATATTTCTCTTTGCAACAGACATGTAT-AACAGTAATGGCTA  948
      ||| ||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTAGGAACATATTTCTCTTTGCAACAGACATGTATAAACAGTAATGGCTA  948

seq1  ATTATGTCTAGTTTTAGGGTCTGGACAGGTATAGTTTAGCCTGTAACCGT  998
      ||||||||||||||||||||||||||||   |||||||||||||||||||
seq2  ATTATGTCTAGTTTTAGGGTCTGGACAGTATTAGTTTAGCCTGTAACCGT  998

seq1  TGTAACATGACTCTAAACAAGGCTCCAGCCCTTTGCTCAAACCCACTCTC  1048
      ||| |||||||||| ||||  |||||||||||||||| ||  || |||  
seq2  TGT-ACATGACTCT-AACA--GCTCCAGCCCTTTGCTTAA--CCCCTCCT  1042

seq1  CTGGTTCTAAGGATCATAACTATCTAAGAATTTGGTGTGCTACTTCTGTG  1098
      |||| |||||| ||||| ||| ||||   |||||| |||||||||  |||
seq2  CTGG-TCTAAGAATCAT-ACT-TCTA--GATTTGG-GTGCTACTTTCGTG  1086

seq1  GCCTTGGGACATAGATAACATCTAAACTTCTAACTTCATTTTTCTCCCTG  1148
      | |||||   ||||  || |||| ||||||  || ||| |||||| ||||
seq2  G-CTTGG--AATAG--AAAATCT-AACTTC--AC-TCA-TTTTCT-CCTG  1125

seq1  TT  1150
      ||
seq2  TT  1127