BAC Information

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BAC

Clone NameB6Ng01-139G05
Chromosome13 (Build37)
Map Location 80,493,622 - 80,494,419
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666925, LOC382780, EG666933
Downstream geneArrdc3, LOC666964, LOC100043074, LOC218368, LOC666979, EG666984, Gpr98
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-139G05.bB6Ng01-139G05.g
ACCDH938386DH938387
length801904
definitionDH938386|Mus musculus domesticus DNA, BAC clone: B6Ng01-139G05, 5' end.DH938387|Mus musculus domesticus DNA, BAC clone: B6Ng01-139G05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaattgaggaacctccagtgggtaggggagtgggtggaggagc
gtgtgggggacttttgggatagctttggaaatgtaaatgaaataaatacc
caatttaaaaaaaaaagtggaagcgggggctgtctctgactacattgcct
gcttttggatccctttcctctcacttgtctagccttaatagaagaatatg
cacctagtctgactgcaacttgataagccaagtccggttgatgtccagga
gatgcctccccttttctgaggagaagcagaggaggggtggatggccagca
agtgaggtgagagaagggattgggaggagcagggacgaaaagctgtgatt
gggatgtaaatagcttaataaaaagaattactaaaacttgatattttgtc
taaagccattgagctggcagcttcaaatggtgtactacacacaggaagtt
ttcttgaattgttgctaaatctgcaaaactttagacgtagaaaatgttaa
agtgcaagtgttcacatttatttgggaaagaacatttgtaagcatgttac
aaagaaggtagatatcagataaaaacagtccactttttacaaagtgtatc
tgtgtagggaaatataaaacatacttttcatcaaaaaaaatgtttaacat
ccttagtcatcaggaaaatgcaaatcaaaacgaccaggagattccaactc
acaccaatcagaatggctaagatcaaaacctcaggtgagagctctgtact
tgctaccgtctgctgccagaagacgttttctctgatgacaactttgacaa
g
gaattctacttagctctgtaccccatttttaaattgggttatttgggttg
ttggagtttaacttcttgagtcctttatgtattttgaatattagcactct
attggatatagggttggtgaagatcttttctaaatctgtaggctgccgtt
tgtcctgttgacagtgttcgttttctaacagaggttttcagtttcttgac
ccttacaaaggtcccatttatcaatggttgatcttagagcgtgagccatt
aatgctctgttcaggaagtagtcttctgcaccagtgatttcaaggctatc
cccagctttctgatcaacaagattaagtgtatctggatttatgttgaggt
ccttgattcacttggacttatgttttgtttagggtgataaataggggcct
atttgtattcttctatatgcagacatccagttagaccagcaacatttgtt
aaaaattctttcttttttttttcattgtatgattttcacttcttgtcaaa
aatcagctgtccatacatgtgtgggttgatttttcagtctttgggtctgt
tccattgatgaatctgtttgtttctataccaaaacaatgtagttattatc
actattgctctgtaaaacagcttgaggtcagggatggtgatacctccaga
aattcttttttgttcaggattgtttttggctattctgttttattatttcc
atatgaagttgagaattgttcttttcaggtctgtaagtgttggaatattg
ctggggattgcattaaatctataaattgcttttcataagatggtcatttt
tactatgttatcctaccccgatccatgatcttgggagatctttcatcttt
ttgatagaaaggatcattttctttcttagggacttgaagattctttccat
aata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_80493622_80494419
seq2: B6Ng01-139G05.b_48_848

seq1  GAATTCTCAATTGAGGAACCTCCAGTGGGTAGGGGAGTGGGTGGAGGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAATTGAGGAACCTCCAGTGGGTAGGGGAGTGGGTGGAGGAGC  50

seq1  GTGTGGGGGACTTTTGGGATAGCTTTGGAAATGTAAATGAAATAAATACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGGGGACTTTTGGGATAGCTTTGGAAATGTAAATGAAATAAATACC  100

seq1  CAATTTAAAAAAAAAAGTGGAAGCGGGGGCTGTCTCTGACTACATTGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTAAAAAAAAAAGTGGAAGCGGGGGCTGTCTCTGACTACATTGCCT  150

seq1  GCTTTTGGATCCCTTTCCTCTCACTTGTCTAGCCTTAATAGAAGAATATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGGATCCCTTTCCTCTCACTTGTCTAGCCTTAATAGAAGAATATG  200

seq1  CACCTAGTCTGACTGCAACTTGATAAGCCAAGTCCGGTTGATGTCCAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAGTCTGACTGCAACTTGATAAGCCAAGTCCGGTTGATGTCCAGGA  250

seq1  GATGCCTCCCCTTTTCTGAGGAGAAGCAGAGGAGGGGTGGATGGCCAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCTCCCCTTTTCTGAGGAGAAGCAGAGGAGGGGTGGATGGCCAGCA  300

seq1  AGTGAGGTGAGAGAAGGGATTGGGAGGAGCAGGGACGAAAAGCTGTGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGGTGAGAGAAGGGATTGGGAGGAGCAGGGACGAAAAGCTGTGATT  350

seq1  GGGATGTAAATAGCTTAATAAAAAGAATTACTAAAACTTGATATTTTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGTAAATAGCTTAATAAAAAGAATTACTAAAACTTGATATTTTGTC  400

seq1  TAAAGCCATTGAGCTGGCAGCTTCAAATGGTGTACTACACACAGGAAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCCATTGAGCTGGCAGCTTCAAATGGTGTACTACACACAGGAAGTT  450

seq1  TTCTTGAATTGTTGCTAAATCTGCAAAACTTTAGACGTAGAAAATGTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGAATTGTTGCTAAATCTGCAAAACTTTAGACGTAGAAAATGTTAA  500

seq1  AGTGCAAGTGTTCACATTTATTTGGGAAAGAACATTTGTAAGCATGTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAAGTGTTCACATTTATTTGGGAAAGAACATTTGTAAGCATGTTAC  550

seq1  AAAGAAGGTAGATATCAGATAAAAACAGTCCACTTTTTACAAAGTGTATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGGTAGATATCAGATAAAAACAGTCCACTTTTTACAAAGTGTATC  600

seq1  TGTGTAGGGAAATATAAAACATACTTTTCATC-AAAAAAATGTTTAACAT  649
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGTGTAGGGAAATATAAAACATACTTTTCATCAAAAAAAATGTTTAACAT  650

seq1  CCTTAGTCATCAGGAAAATGCAAATCAAAACGACCAGGAGATTCCAACTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGTCATCAGGAAAATGCAAATCAAAACGACCAGGAGATTCCAACTC  700

seq1  ACACCAATCAGAATGGCTAAGATCAAAACCTCAGGTGAGAGCTCTGTACT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAATCAGAATGGCTAAGATCAAAACCTCAGGTGAGAGCTCTGTACT  750

seq1  TGCTACCGTCTGCTGCCAGAAGACG-TTTCTCTGATGACAAC-TTGACAA  797
      ||||||||||||||||||||||||| |||||||||||||||| |||||||
seq2  TGCTACCGTCTGCTGCCAGAAGACGTTTTCTCTGATGACAACTTTGACAA  800

seq1  G  798
      |
seq2  G  801