BAC Information

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BAC

Clone NameB6Ng01-140B22
Chromosome13 (Build37)
Map Location 68,963,169 - 69,114,391
singlet/doubletdoublet
Overlap geneAdcy2, LOC666205
Upstream geneBC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272, LOC100042223, Mtrr, LOC100042233, Fastkd3, 1700001L19Rik
Downstream geneLOC218332, Pols, A530095I07Rik, Srd5a1, Nsun2, LOC100042260, 3110006E14Rik, 4930547H16Rik, Med10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140B22.bB6Ng01-140B22.g
ACCDH938933DH938934
length2451,073
definitionDH938933|Mus musculus domesticus DNA, BAC clone: B6Ng01-140B22, 5' end.DH938934|Mus musculus domesticus DNA, BAC clone: B6Ng01-140B22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,963,169 - 68,963,413)(69,113,302 - 69,114,391)
sequence
actctgtagaccaggctggcctttactcagaaatccacctgcctctgcct
cccaagtgctgggattaaaggtgtgcaccaacagtgcctgtagggatttt
ttttttctattccaacagacatgtgggaactaaggtcatgacaaaatcct
cttttccaatttcactccacttttttcttaaaagccaaattcagaattac
agaacctcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattcttatttgcctttcacatggaagtctttgcggttcaccccaggct
ctgtgagtgccttctggttacactgctgcttctctaccaatggagtgagt
catgaggccatgtttgcctgtcatctttggattaaaagaacgggaagcat
tctgagcttgaaactagctcaggaaaatatgaggcatagtttttgttttg
gcataaatgggacactttttgttttgaggaactcagtgaagatttgcttc
aatatctctcctttacccaacacatcacacagccaagcatcaatctgcgc
ccggcagtttgtaggtcaaggattgggaacggtaggggctaccaatgtcc
caagagtgagtctgacctaaagaagctccgtcaagactgacaaacgaatc
ccctgtttagaactgctggggcatatctgtagctggagaggttgaccttg
acaggcctggcctggttgaaaagagcagtgcttgctctgtggtggatgct
ggtccaggtttctggtattgctgtcactgatacccatactatctgagttg
tgtttcatggatgagatgtcatcctcagctctgaagccagaagcctgaaa
ctgagggagaggctgggctgtgcttgtcgagtaggctcttgaggaatccc
ttcctcatctcttccagcttccagggtgcccttcacaactggacatcctg
tgccttcccttggcattttcccagagtgtcaccttatgcccctcttcccc
ttattataagaacatgattcacattggaattgaaccccgtatgtgacttc
attttcatttgatggtacctgtggaggccctatcttcaagctggttctaa
ctagctatattcagttgtgccaggatttagcaactgaacaaatcttcggg
gctgcagtattcaatccttgacagatttagtttctatcttgtacatgttg
cccctaggagccctccttctgtgctctcttctcactgaggcttgatacct
ctcattcacgctttcttagaccgaagggaacttatgtgaggagttgggtt
cttccttttccaaacacgtctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_68963169_68963413
seq2: B6Ng01-140B22.b_50_294

seq1  ACTCTGTAGACCAGGCTGGCCTTTACTCAGAAATCCACCTGCCTCTGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTAGACCAGGCTGGCCTTTACTCAGAAATCCACCTGCCTCTGCCT  50

seq1  CCCAAGTGCTGGGATTAAAGGTGTGCACCAACAGTGCCTGTAGGGATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGTGCTGGGATTAAAGGTGTGCACCAACAGTGCCTGTAGGGATTTT  100

seq1  TTTTTTCTATTCCAACAGACATGTGGGAACTAAGGTCATGACAAAATCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTATTCCAACAGACATGTGGGAACTAAGGTCATGACAAAATCCT  150

seq1  CTTTTCCAATTTCACTCCACTTTTTTCTTAAAAGCCAAATTCAGAATTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCAATTTCACTCCACTTTTTTCTTAAAAGCCAAATTCAGAATTAC  200

seq1  AGAACCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  245
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  245

seq1: chr13_69113302_69114391
seq2: B6Ng01-140B22.g_67_1139 (reverse)

seq1  ACAGACAGTGGTTTGAAAAGGGAAGAACCCAAACCTCCTTCACATAGGTT  50
      |||||| || ||||| ||| ||||||||||||  |||| ||||||| |||
seq2  ACAGAC-GT-GTTTGGAAAAGGAAGAACCCAA--CTCC-TCACATAAGTT  45

seq1  CCCTTCGGTCTAAAGGAAAGCGTGATAGCAGGAGAGTTATCAAGCCTCAG  100
      |||||||||||||  ||||||||||    | ||||| |||||||||||| 
seq2  CCCTTCGGTCTAA--GAAAGCGTGA----ATGAGAGGTATCAAGCCTCA-  88

seq1  GTGAGAGAGGAAGCCACAGAGGGAGGGCTTCCCTAGGGGCAACATGTACA  150
      |||||| ||  || |||||| ||||||||  |||||||||||||||||||
seq2  GTGAGA-AGAGAG-CACAGAAGGAGGGCT--CCTAGGGGCAACATGTACA  134

seq1  AGATAGAAACTAAATCTGTCAAGGATTGAATACTGCAGCCCCGAAAGATT  200
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGATAGAAACTAAATCTGTCAAGGATTGAATACTGCAGCCCCG-AAGATT  183

seq1  TGTTCAGTTGCTAAATCCTGGCACAACTGAATATAGCTAGTTAGAACCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGTTGCTAAATCCTGGCACAACTGAATATAGCTAGTTAGAACCAG  233

seq1  CTTGGAGATAGGGCCTCCACAGGTACCATCAAATGAAAATGAAGTCACAT  300
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGATAGGGCCTCCACAGGTACCATCAAATGAAAATGAAGTCACAT  283

seq1  ACGGGGTTCAATTCCAATGTGAATCATGTTCTTATAATAAGGGGAAGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGGTTCAATTCCAATGTGAATCATGTTCTTATAATAAGGGGAAGAGG  333

seq1  GGCATAAGGTGACACTCTGGGAAAATGCCAAGGGAAGGCACAGGATGTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAAGGTGACACTCTGGGAAAATGCCAAGGGAAGGCACAGGATGTCC  383

seq1  AGTTGTGAAGGGCACCCTGGAAGCTGGAAGAGATGAGGAAGGGATTCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGAAGGGCACCCTGGAAGCTGGAAGAGATGAGGAAGGGATTCCTC  433

seq1  AAGAGCCTACTCGACAAGCACAGCCCAGCCTCTCCCTCAGTTTCAGGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCCTACTCGACAAGCACAGCCCAGCCTCTCCCTCAGTTTCAGGCTT  483

seq1  CTGGCTTCAGAGCTGAGGATGACATCTCATCCATGAAACACAACTCAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTCAGAGCTGAGGATGACATCTCATCCATGAAACACAACTCAGAT  533

seq1  AGTATGGGTATCAGTGACAGCAATACCAGAAACCTGGACCAGCATCCACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGGGTATCAGTGACAGCAATACCAGAAACCTGGACCAGCATCCACC  583

seq1  ACAGAGCAAGCACTGCTCTTTTCAACCAGGCCAGGCCTGTCAAGGTCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCAAGCACTGCTCTTTTCAACCAGGCCAGGCCTGTCAAGGTCAAC  633

seq1  CTCTCCAGCTACAGATATGCCCCAGCAGTTCTAAACAGGGGATTCGTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGCTACAGATATGCCCCAGCAGTTCTAAACAGGGGATTCGTTTG  683

seq1  TCAGTCTTGACGGAGCTTCTTTAGGTCAGACTCACTCTTGGGACATTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTTGACGGAGCTTCTTTAGGTCAGACTCACTCTTGGGACATTGGT  733

seq1  AGCCCCTACCGTTCCCAATCCTTGACCTACAAACTGCCGGGCGCAGATTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCTACCGTTCCCAATCCTTGACCTACAAACTGCCGGGCGCAGATTG  783

seq1  ATGCTTGGCTGTGTGATGTGTTGGGTAAAGGAGAGATATTGAAGCAAATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGGCTGTGTGATGTGTTGGGTAAAGGAGAGATATTGAAGCAAATC  833

seq1  TTCACTGAGTTCCTCAAAACAAAAAGTGTCCCATTTATGCCAAAACAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGAGTTCCTCAAAACAAAAAGTGTCCCATTTATGCCAAAACAAAA  883

seq1  ACTATGCCTCATATTTTCCTGAGCTAGTTTCAAGCTCAGAATGCTTCCCG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGCCTCATATTTTCCTGAGCTAGTTTCAAGCTCAGAATGCTTCCCG  933

seq1  TTCTTTTAATCCAAAGATGACAGGCAAACATGGCCTCATGACTCACTCCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTAATCCAAAGATGACAGGCAAACATGGCCTCATGACTCACTCCA  983

seq1  TTGGTAGAGAAGCAGCAGTGTAACCAGAAGGCACTCACAGAGCCTGGGGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAGAGAAGCAGCAGTGTAACCAGAAGGCACTCACAGAGCCTGGGGT  1033

seq1  GAACCGCAAAGACTTCCATGTGAAAGGCAAATAAGAATTC  1090
      ||||||||||||||||||||||||||||||||||||||||
seq2  GAACCGCAAAGACTTCCATGTGAAAGGCAAATAAGAATTC  1073