BAC Information

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BAC

Clone NameB6Ng01-141G07
Chromosome13 (Build37)
Map Location 8,196,371 - 8,313,846
singlet/doubletdoublet
Overlap geneAdarb2
Upstream geneLOC667611, EG623516, LOC791083, LOC382722
Downstream geneEG666941, Wdr37, LOC100039632, Idi1, EG382723, LOC100039655, Idi2, Gtpbp4, LOC667721, Larp5, EG667727, LOC100039719, Dip2c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141G07.bB6Ng01-141G07.g
ACCDH939863DH939864
length1,1281,027
definitionDH939863|Mus musculus domesticus DNA, BAC clone: B6Ng01-141G07, 5' end.DH939864|Mus musculus domesticus DNA, BAC clone: B6Ng01-141G07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,196,371 - 8,197,517)(8,312,815 - 8,313,846)
sequence
gaattcaactaaattttttcctgaaaatagcatacatacatacatacata
catacatacataagcaaattaaaattggtatggttatcaccaagaaaaat
actgtctatctgaattattttaactagaaacctcattgtggttgctttaa
cattcaaagggaacttagcaaatctggcccactccaatagttgctaagta
tgcgctgggtgttcacaaaccataggcatgtctgggagagaagaatccaa
gaacaaaagggaaaatgcaattttagtaggagcatgagatagagcacatt
ttcacattcaagattcttctctgctccccgggacctctctactaagcctc
ttctcaatggcctgttcccacaccctttgacggaaatgtgaataagaacg
cattttatacagcggctgttatcgcaaaatatcattcagagatattttct
agtctcatgcccaagttctttgatgtgagttatttaaatttaagaacaat
gacagaagatgaaagagtaaaatagccctcctctaccatgtctctgtttg
taaaaataataacttaataccatgtatgatgctacagtgagtcagcaaac
ataaatatctccagggaaacctttgttctgatatttcctacctagtgaaa
ttgtctggtagggagagaatattaaacaaaatcctgactctaagcaagtc
atgtttatttatattggtgttcctatttgtttttccaaaccaataagaaa
caaagttagctgtatttttaaatgaacagtttggaaatgcagacattatc
aggaattgaagtattaccctaagtgcccaacagtggatgaatgaatcaaa
gaaacaatatatgtattagacagacggactgacagacagacagacagatg
atagatatacagacagactggtagtttacctatgataaaattatttcatt
tgtagaaatggatagaactggagatgactatgttatatgaaagaagtcta
gactcataaaggaaatatatacttggctttcaggtgtgaaaatgaagaga
agtctatttgtgatgtgaaggaagaaaaataagacaagaaaggaagtaaa
aaagggttctgttaacaccacaccacac

gaattcagtttaggtgttgttcataattattctatgacttccccagagac
taggaagacaaacttgctatgatgcacaattaatatgtactgataaaagg
cattaccatgaaaatatctacattaattattcagaggagtgacagataca
ttgcaaagagacacagattgtgacaaagaagactcgggaagagaatagtt
ttaatggcagctaacctcattcgtgtctttaatttgctcagtgtcccaaa
attgagcttctgttttctctttgcccctgtgttcatcccagaacttctac
ttgctatattttgttttttttttcaggatttagttagccaaatgattagc
acttcagataggatatatcctatcaacagcactaggtcttattgttttat
gctcttcaataaagaaataagagacaactaattttttcacatataaacca
aatattccaaaaagtatactgtcagccagaaatcattgtcattgtggggc
tttactgaatgtgacgcttgtgttcaagtgaggctcatgacagatcacat
acatgcaaagagagaagtgacttcagtgtgtgataaatgctgcacaacag
gtagattgctacttagctgtccttcacctttatattagcatgcttatggg
aaagggcttcatgggctgttttacacactttgcaaaatgtatcatttaca
tattgaccataagaagtggctttactctgcaggcctatttaagtatttgt
gtctaactacctgacagactctgagctgggtggttgggaggtgatatgta
ttcaattgctcatttttttgccatagaaatattaaagctgtattgtgaaa
ctttcatggacccacagataatgacacagaggatttttaaaaaataatat
tttaattcttagggctttagctaggcagttcccagccagctatctaaact
taacctgactaactagcttatgatcaatgactcagcatgggctaggtctg
catccttctgctctgctgcactctgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_8196371_8197517
seq2: B6Ng01-141G07.b_47_1174

seq1  GAATTCAACTAAATTTTTTCCTGAAAATAGCATACATACATACATACATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTAAATTTTTTCCTGAAAATAGCATACATACATACATACATA  50

seq1  CATACATACATAAGCAAATTAAAATTGGTATGGTTATCACCAAGAAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATACATAAGCAAATTAAAATTGGTATGGTTATCACCAAGAAAAAT  100

seq1  ACTGTCTATCTGAATTATTTTAACTAGAAACCTCATTGTGGTTGCTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTATCTGAATTATTTTAACTAGAAACCTCATTGTGGTTGCTTTAA  150

seq1  CATTCAAAGGGAACTTAGCAAATCTGGCCCACTCCAATAGTTGCTAAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAAAGGGAACTTAGCAAATCTGGCCCACTCCAATAGTTGCTAAGTA  200

seq1  TGCGCTGGGTGTTCACAAACCATAGGCATGTCTGGGAGAGAAGAATCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCTGGGTGTTCACAAACCATAGGCATGTCTGGGAGAGAAGAATCCAA  250

seq1  GAACAAAAGGGAAAATGCAATTTTAGTAGGAGCATGAGATAGAGCACATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAAAGGGAAAATGCAATTTTAGTAGGAGCATGAGATAGAGCACATT  300

seq1  TTCACATTCAAGATTCTTCTCTGCTCCCCGGGACCTCTCTACTAAGCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATTCAAGATTCTTCTCTGCTCCCCGGGACCTCTCTACTAAGCCTC  350

seq1  TTCTCAATGGCCTGTTCCCACACCCTTTGACGGAAATGTGAATAAGAACG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAATGGCCTGTTCCCACACCCTTTGACGGAAATGTGAATAAGAACG  400

seq1  CATTTTATACAGCGGCTGTTATCGCAAAATATCATTCAGAGATATTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTATACAGCGGCTGTTATCGCAAAATATCATTCAGAGATATTTTCT  450

seq1  AGTCTCATGCCCAAGTTCTTTGATGTGAGTTATTTAAATTTAAGAACAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCATGCCCAAGTTCTTTGATGTGAGTTATTTAAATTTAAGAACAAT  500

seq1  GACAGAAGATGAAAGAGTAAAATAGCCCTCCTCTACCATGTCTCTGTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAAGATGAAAGAGTAAAATAGCCCTCCTCTACCATGTCTCTGTTTG  550

seq1  TAAAAATAATAACTTAATACCATGTATGATGCTACAGTGAGTCAGCAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATAATAACTTAATACCATGTATGATGCTACAGTGAGTCAGCAAAC  600

seq1  ATAAATATCTCCAGGGAAACCTTTGTTCTGATATTTCCTACCTAGTGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATCTCCAGGGAAACCTTTGTTCTGATATTTCCTACCTAGTGAAA  650

seq1  TTGTCTGGTAGGGAGAGAATATTAAACAAAATCCTGACTCTAAGCAAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGGTAGGGAGAGAATATTAAACAAAATCCTGACTCTAAGCAAGTC  700

seq1  ATGTTTATTTATATTGGTGTTCCTATTTGTTTTTCCAAACCAATAAGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTATTTATATTGGTGTTCCTATTTGTTTTTCCAAACCAATAAGAAA  750

seq1  CAAAGTTAGCTGTATTTTTAAATGAACAGTTTGGAAATGCAGACATTATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTAGCTGTATTTTTAAATGAACAGTTTGGAAATGCAGACATTATC  800

seq1  AGGAATTGAAGTATTACCCTAAGTGCCCAACAGTGGATGAATGAATCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTGAAGTATTACCCTAAGTGCCCAACAGTGGATGAATGAATCAAA  850

seq1  GAAACAATATATGTATTAGACAGACGGACTGACAGACAGACAGACAGATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAATATATGTATTAGACAGACGGACTGACAGACAGACAGACAGATG  900

seq1  ATAGATATACAGACAGACTGGTAGTTTTACCTATGATAAAATTATTTCAT  950
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATAGATATACAGACAGACTGGTAG-TTTACCTATGATAAAATTATTTCAT  949

seq1  TTGTAAGAAAATGGATAGAACTGGAGATGACTATGTTATATGAAAGAAG-  999
      |||||   ||||||||||||||||||||||||||||||||||||||||| 
seq2  TTGTA--GAAATGGATAGAACTGGAGATGACTATGTTATATGAAAGAAGT  997

seq1  CCAGACCCATAAAGAAAATATCATACTTTGGCTTTCATGTGTGGAAACAT  1049
      | |||| ||||||| |||||| |||| |||||||||| |||||  || ||
seq2  CTAGACTCATAAAGGAAATAT-ATAC-TTGGCTTTCAGGTGTG--AAAAT  1043

seq1  GAAAGAGAGGTCTATTTGTGATGTGAAAAGGAAAGAAAAATTATAGACCA  1099
      | |||||| ||||||||||||||||||   | ||||||||| | |   ||
seq2  G-AAGAGAAGTCTATTTGTGATGTGAA---GGAAGAAAAATAAGA---CA  1086

seq1  AGAAAGGAAAGTAATAAAGGGGTTCTTGTTACACACACACACACACAC  1147
      ||||||| |||||| ||| |||||| ||||| |||| ||||| |||||
seq2  AGAAAGG-AAGTAA-AAAAGGGTTC-TGTTA-ACAC-CACAC-CACAC  1128


seq1: chr13_8312815_8313846
seq2: B6Ng01-141G07.g_67_1093 (reverse)

seq1  GGCAGAGTGCAGCAGAGCAGAGAGATGCAGACCTAGCCACATGCTGGGTC  50
      |||||||||||||||||||||  ||||||||||||||| ||||||| |||
seq2  GGCAGAGTGCAGCAGAGCAGAAGGATGCAGACCTAGCC-CATGCTGAGTC  49

seq1  ACTGGATCATAAGCTAGTTAGTCAGGTTAAGTTTAGATAGCTGGCTGGGA  100
      | | ||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-TTGATCATAAGCTAGTTAGTCAGGTTAAGTTTAGATAGCTGGCTGGGA  98

seq1  ACCTGCCCTAGCTAAAAGCCCTAAGAATTAAAATATTATTTTTTTAAAAA  150
      | ||| ||||||| |||||||||||||||||||||||| |||||||||||
seq2  A-CTG-CCTAGCT-AAAGCCCTAAGAATTAAAATATTA-TTTTTTAAAAA  144

seq1  TCCTCTGTGTCATTATCTGTGGGTCCATGAAAGTTTCACAATACAGCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGTGTCATTATCTGTGGGTCCATGAAAGTTTCACAATACAGCTTT  194

seq1  AATATTTCTATGGCAAAAAAATGAGCAATTGAATACATATCACCT-CCAA  249
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AATATTTCTATGGCAAAAAAATGAGCAATTGAATACATATCACCTCCCAA  244

seq1  CCACCCAGCTCAGAGTCTGTCAGGTAGTTAGACACAAATACTTAAATAGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCAGCTCAGAGTCTGTCAGGTAGTTAGACACAAATACTTAAATAGG  294

seq1  CCTGCAGAGTAAAGCCACTTCTTATGGTCAATATGTAAATGATACATTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGAGTAAAGCCACTTCTTATGGTCAATATGTAAATGATACATTTT  344

seq1  GCAAAGTGTGTAAAACAGCCCATGAAGCCCTTTCCCATAAGCATGCTAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGTGTGTAAAACAGCCCATGAAGCCCTTTCCCATAAGCATGCTAAT  394

seq1  ATAAAGGTGAAGGACAGCTAAGTAGCAATCTACCTGTTGTGCAGCATTTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGGTGAAGGACAGCTAAGTAGCAATCTACCTGTTGTGCAGCATTTA  444

seq1  TCACACACTGAAGTCACTTCTCTCTTTGCATGTATGTGATCTGTCATGAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACACTGAAGTCACTTCTCTCTTTGCATGTATGTGATCTGTCATGAG  494

seq1  CCTCACTTGAACACAAGCGTCACATTCAGTAAAGCCCCACAATGACAATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTTGAACACAAGCGTCACATTCAGTAAAGCCCCACAATGACAATG  544

seq1  ATTTCTGGCTGACAGTATACTTTTTGGAATATTTGGTTTATATGTGAAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGGCTGACAGTATACTTTTTGGAATATTTGGTTTATATGTGAAAA  594

seq1  AATTAGTTGTCTCTTATTTCTTTATTGAAGAGCATAAAACAATAAGACCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTTGTCTCTTATTTCTTTATTGAAGAGCATAAAACAATAAGACCT  644

seq1  AGTGCTGTTGATAGGATATATCCTATCTGAAGTGCTAATCATTTGGCTAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGTTGATAGGATATATCCTATCTGAAGTGCTAATCATTTGGCTAA  694

seq1  CTAAATCCTGAAAAAAAAAACAAAATATAGCAAGTAGAAGTTCTGGGATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATCCTGAAAAAAAAAACAAAATATAGCAAGTAGAAGTTCTGGGATG  744

seq1  AACACAGGGGCAAAGAGAAAACAGAAGCTCAATTTTGGGACACTGAGCAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGGGGCAAAGAGAAAACAGAAGCTCAATTTTGGGACACTGAGCAA  794

seq1  ATTAAAGACACGAATGAGGTTAGCTGCCATTAAAACTATTCTCTTCCCGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGACACGAATGAGGTTAGCTGCCATTAAAACTATTCTCTTCCCGA  844

seq1  GTCTTCTTTGTCACAATCTGTGTCTCTTTGCAATGTATCTGTCACTCCTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTTTGTCACAATCTGTGTCTCTTTGCAATGTATCTGTCACTCCTC  894

seq1  TGAATAATTAATGTAGATATTTTCATGGTAATGCCTTTTATCAGTACATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAATTAATGTAGATATTTTCATGGTAATGCCTTTTATCAGTACATA  944

seq1  TTAATTGTGCATCATAGCAAGTTTGTCTTCCTAGTCTCTGGGGAAGTCAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGTGCATCATAGCAAGTTTGTCTTCCTAGTCTCTGGGGAAGTCAT  994

seq1  AGAATAATTATGAACAACACCTAAACTGAATTC  1032
      |||||||||||||||||||||||||||||||||
seq2  AGAATAATTATGAACAACACCTAAACTGAATTC  1027


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