BAC Information

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BAC

Clone NameB6Ng01-141K12
Chromosome13 (Build37)
Map Location 3,129,120 - 3,130,163
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667375, LOC544917
Downstream geneLOC236294, Speer6-ps1, LOC674228, LOC667411, LOC100039182, 2810429I04Rik, Gdi2, Asb13, Calml3, Calm4, Calm5, LOC100039279, Net1, Tubal3, Ucn3, Akr1c14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141K12.bB6Ng01-141K12.g
ACCDH940058DH940059
length1,2751,022
definitionDH940058|Mus musculus domesticus DNA, BAC clone: B6Ng01-141K12, 5' end.DH940059|Mus musculus domesticus DNA, BAC clone: B6Ng01-141K12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgatcgtgagcccactgtcgtacttctctggctgtgaaatga
gttccttggtcagaagcaatactgtgtggaataccatgacgatagatgag
gcattctgtcagtccgtgaatggtggttttagcagaggcattacgtgcag
gaaaggcaaatccataaccagaataagtatctactccagtaagaacaaaa
cgctgtcctttccacgaaggaagtggtccaatgtagtcaacctgccacca
ggttgctggttggtcacctcgaggaatggtgccatatctggggctcagtg
ttggtttctgctgttggcagatctggcaatcagcagcagctgtagccagg
tcagccttggtgagtggaagcccgtgttgctgagcccaagcataacctcc
atctcgaccaccatgaccactttgttcatgtgcccattgagcaatgacag
ggatggctggggagagaggctgattgtccacagaacgggtcatcttatcc
acttgattattgaattcctcctcggctgaagtcaccttttggtgagcatt
tacatgggacacaaatatcttcacatcctttgcccatttggagagatcta
tccacatacttcttccccagatgtctttctcaccaattttccaattgtga
tctttccaagtccctgaccatccagccaatccattggctacagcccatga
gtcagtgaataatcgtacatctggccatttcttcttgcaaacaaactgta
ataccatgtgtactgcccgaagttctgcccactgtgaagatttcccttca
cctgtgtctttcagggtgtctcagaaaggggttgtaatgctgcagctgtc
cacttctgggtggtgcctgcataacgtgcagagccatcagtaaaccaggc
tctagtctttatctcttcggtcagttgatcatagggacaccccatgaggc
tataagcacatgtttgggagcagatgggcatgtaacaggacctgaaacat
aggcattgagcaccttcttcatgtaactggccttgtgcttcagggacctg
ctttgtccgatcacgtgtagatcccacttcatttgataatagacctgctg
ctgtgccccgcccccttattgaactggcagggttgatagtaccactctgt
atggagtgttaggtgccatagtactggtgcctaattcgacaatcatatcc
ctaaggccaatcaaggccagagctgtgtttcatagaagtacgctcgtaaa
gtagagatagttcttcttcattacg
gaattcagcgctgagtttgttccctgacatcacatcctacctacctctcc
atgagatgaggctttgtctcaccttaggaaatgcaaaatccaatacaaac
atcagaatcttgctgatctgcacgggtgaaattcacaccactgcctcact
gagaacagccacactggaaggtttcagggtgtgttgaagtagtccagcat
gtcagtgtaacctgcaaggtgcctggcgacattaggaacagaaatctgga
gcattcctcacacagcagttttcactatggtcttcaaagtcttctttttt
ttttttttttttttttttacagaaatactatgggttcacagatgcacata
cacacacaaacatgaagaccagaggacttcatgggaggattgttctctac
catgtgcattccaaggaagaaattcaggtttttaagctgggaagcaagga
tgaatacctgctaacccaagccatcagctgatcatctaaagcaaagaatt
tcataagctctgtaactgtatttatgttctctctctgtctgtctgtctgt
ctctctctctgtgtctctctcatctctctctttgtgtgtgtgtgttttat
tctcattgtgtacattttcccacaccaagaatcacgtaagaattaatgaa
aatacataagaaatggaacccaaggaggcatccttcggggaaggctggag
gttagagtgacgtaaaagcccctaaagtgactcttccttttggtgtaagt
tacacctcagacataattgggtcctttggtggatttttcttttctctata
gccctgcagactagaatgaacctaggcattgtgcatgttagcaaatactg
gaaccttaatcacatccagtctagaaactcattcatctacataattacag
gcagtgaatcagacattcagctgagacactgctgacatgttgcatctcag
actggtgtcagatggcgacaaaatgcttcaggttgggaatgtttgcagct
tggagataataaagactgtggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_3129120_3130163
seq2: B6Ng01-141K12.g_66_1087 (reverse)

seq1  ACCACAGTGTCTTATTTTATCTCCCAGGCTGCAAAACATTCCCAGACTTG  50
      ||||||  ||||| | |||||| ||| ||||| |||||||||||  ||  
seq2  ACCACA--GTCTT-TATTATCT-CCAAGCTGC-AAACATTCCCAACCT--  43

seq1  GAAGCATTTTGTCGGCCATTCTTGACAACCAGTCTTGAGATGGCCACATT  100
      ||||||||||||| |||||   |||| ||||||| |||||| || ||| |
seq2  GAAGCATTTTGTC-GCCAT--CTGAC-ACCAGTC-TGAGAT-GCAACA-T  86

seq1  GTCAGCAGTGTCTCAGCTGAATGTCTTGATTCCACCTGCCCTGTAATAAT  150
      ||||||||||||||||||||||||| ||||||   ||| |||||||| | 
seq2  GTCAGCAGTGTCTCAGCTGAATGTC-TGATTC--ACTG-CCTGTAATTA-  131

seq1  TGTAGATGAATGGGTTTCTAGACCTGGGATGTGATTAAGGTTTACAGTAT  200
      |||||||||||| ||||||||||   |||||||||||||| || ||||||
seq2  TGTAGATGAATGAGTTTCTAGAC--TGGATGTGATTAAGG-TTCCAGTAT  178

seq1  TTGCCTAACATGCACAATGCCCTAGGTTCCATTCTAGTCTGCAGGGCTAT  250
      ||| ||||||||||||||| |||||||| |||||||||||||||||||||
seq2  TTG-CTAACATGCACAATG-CCTAGGTT-CATTCTAGTCTGCAGGGCTAT  225

seq1  AG-GGAAAGAAAAATACAACAAAGGACCCAATTATGTCTGAGGTGTAACC  299
      || | |||||||||| || |||||||||||||||||||||||||||||| 
seq2  AGAGAAAAGAAAAATCCACCAAAGGACCCAATTATGTCTGAGGTGTAACT  275

seq1  TACAACAAAAGG-AGAGTCACCTTAGGGGCTTTTACGTCACTCTAACCTC  348
      |||| ||||||| |||||||| ||||||||||||||||||||||||||||
seq2  TACACCAAAAGGAAGAGTCACTTTAGGGGCTTTTACGTCACTCTAACCTC  325

seq1  CAGCCTTCCCCGAAGG-TGCCTCCTTGGGTTCCATTTCTTATGTATTTTC  397
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CAGCCTTCCCCGAAGGATGCCTCCTTGGGTTCCATTTCTTATGTATTTTC  375

seq1  ATTAATTCTTACGTGATTCTTGGTGTGGGAAAATGTACACAATGAGAATA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTCTTACGTGATTCTTGGTGTGGGAAAATGTACACAATGAGAATA  425

seq1  AAACACACACACACAAAGAGAGAGATGAGAGAGACACAGAGAGAGAGACA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACACACACACAAAGAGAGAGATGAGAGAGACACAGAGAGAGAGACA  475

seq1  GACAGACAGACAGAGAGAGAACATAAATACAGTTACAGAGCTTATGAAAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACAGACAGAGAGAGAACATAAATACAGTTACAGAGCTTATGAAAT  525

seq1  TCTTTGCTTTAGATGATCAGCTGATGGCTTGGGTTAGCAGGTATTCATCC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCTTTAGATGATCAGCTGATGGCTTGGGTTAGCAGGTATTCATCC  575

seq1  TTGCTTCCCAGCTTAAAAACCTGAATTTCTTCCTTGGAATGCACATGGTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCCCAGCTTAAAAACCTGAATTTCTTCCTTGGAATGCACATGGTA  625

seq1  GAGAACAATCCTCCCATGAAGTCCTCTGGTCTTCATGTTTGTGTGTGTAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACAATCCTCCCATGAAGTCCTCTGGTCTTCATGTTTGTGTGTGTAT  675

seq1  GTGCATCTGTGAACCCATAGTATTTCTGTAAAAAAAAAAAAAAAAAAAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATCTGTGAACCCATAGTATTTCTGTAAAAAAAAAAAAAAAAAAAAA  725

seq1  AAAGAAGACTTTGAAGACCATAGTGAAAACTGCTGTGTGAGGAATGCTCC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGACTTTGAAGACCATAGTGAAAACTGCTGTGTGAGGAATGCTCC  775

seq1  AGATTTCTGTTCCTAATGTCGCCAGGCACCTTGCAGGTTACACTGACATG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCTGTTCCTAATGTCGCCAGGCACCTTGCAGGTTACACTGACATG  825

seq1  CTGGACTACTTCAACACACCCTGAAACCTTCCAGTGTGGCTGTTCTCAGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACTACTTCAACACACCCTGAAACCTTCCAGTGTGGCTGTTCTCAGT  875

seq1  GAGGCAGTGGTGTGAATTTCACCCGTGCAGATCAGCAAGATTCTGATGTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGTGGTGTGAATTTCACCCGTGCAGATCAGCAAGATTCTGATGTT  925

seq1  TGTATTGGATTTTGCATTTCCTAAGGTGAGACAAAGCCTCATCTCATGGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTGGATTTTGCATTTCCTAAGGTGAGACAAAGCCTCATCTCATGGA  975

seq1  GAGGTAGGTAGGATGTGATGTCAGGGAACAAACTCAGCGCTGAATTC  1044
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAGGTAGGATGTGATGTCAGGGAACAAACTCAGCGCTGAATTC  1022