BAC Information

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BAC

Clone NameB6Ng01-142L07
Chromosome13 (Build37)18 (Build37)
Map Location 87,428,331 - 87,429,07945,554,231 - 45,554,752
singlet/doubletsingletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC675707
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142L07.bB6Ng01-142L07.g
ACCDH940833DH940834
length918929
definitionDH940833|Mus musculus domesticus DNA, BAC clone: B6Ng01-142L07, 5' end.DH940834|Mus musculus domesticus DNA, BAC clone: B6Ng01-142L07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(87,428,331 - 87,429,079)(45,554,231 - 45,554,752)
sequence
gaattcacacaaggcacaggtaaagaataaacaagaccgggacaactcat
caaagaagtctaagaaattgcaaaaagtcaacaaaattatataaattaat
acaaatttataaatgataattatgaatattaatagtttcagtttgacaat
tagaagactgaatatcacagattagaacatagatcctctgtttttggttt
gtctaatttttaagaaacagagacgtaccactagagattaaactgttagc
attaagaattgaaagagacttggtagtctagatattagtatagaaataaa
tatggctggaacagatacaataaaataatacctaatgatattctgctata
tttatatgttggtgccttgtccagccatcattagagaagagaggctaaac
tgaaggattatattaggcccctcatctaggagatctgggaaccccaagaa
aaagaaagaggaaagattctacttaacagagaggatggacaagccaggag
aatatggaccatcaagccaattcaactaaatggtctcacatgaactcaca
agtctaaattaacaaacaaagggcttctgtgagtctgaaactagtccttt
gcctatgatatgcctataatctttatgtttattgtgggagtcaaaacagt
gtgaccaactgtttctctgactttttgcttgcttttataacttgtatctt
attttgttctgtttgactgtcatatctgggaacttctaaaaattccctta
ttttttttctctggacctcaaacagaaccatgtaacagaggaaactgttc
ctcattattttattctaatattttattttcactgaaaatatatttttttc
tcaagcactccatctcgaccacatttccccatcattcctcttctcccaaa
atgtcagagaacagttgg
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgt
atcgatattcataagagaaaatggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaagagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggctgggagactatgtataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
ttgtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctctagtgagtctagctaagggtatctatc
ttgttgattttctcaaagaaccaactcctcctttggttaattctttgaat
agttcttcttgtttccacttggttgatttcacccctgagtttgattattt
cctgccgtctactcctcttgggtgaatttgcttccttttttctagagctt
tagatgtgttgtcaagctgctagtatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_87428331_87429079
seq2: B6Ng01-142L07.b_46_794 (reverse)

seq1  AAGGGAATTTTTAGAAGTTCCCAGATATGACAGTCAAACAGAACAAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAATTTTTAGAAGTTCCCAGATATGACAGTCAAACAGAACAAAATA  50

seq1  AGATACAAGTTATAAAAGCAAGCAAAAAGTCAGAGAAACAGTTGGTCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACAAGTTATAAAAGCAAGCAAAAAGTCAGAGAAACAGTTGGTCACA  100

seq1  CTGTTTTGACTCCCACAATAAACATAAAGATTATAGGCATATCATAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTGACTCCCACAATAAACATAAAGATTATAGGCATATCATAGGCA  150

seq1  AAGGACTAGTTTCAGACTCACAGAAGCCCTTTGTTTGTTAATTTAGACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACTAGTTTCAGACTCACAGAAGCCCTTTGTTTGTTAATTTAGACTT  200

seq1  GTGAGTTCATGTGAGACCATTTAGTTGAATTGGCTTGATGGTCCATATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTCATGTGAGACCATTTAGTTGAATTGGCTTGATGGTCCATATTC  250

seq1  TCCTGGCTTGTCCATCCTCTCTGTTAAGTAGAATCTTTCCTCTTTCTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCTTGTCCATCCTCTCTGTTAAGTAGAATCTTTCCTCTTTCTTTT  300

seq1  TCTTGGGGTTCCCAGATCTCCTAGATGAGGGGCCTAATATAATCCTTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGGTTCCCAGATCTCCTAGATGAGGGGCCTAATATAATCCTTCAG  350

seq1  TTTAGCCTCTCTTCTCTAATGATGGCTGGACAAGGCACCAACATATAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCCTCTCTTCTCTAATGATGGCTGGACAAGGCACCAACATATAAAT  400

seq1  ATAGCAGAATATCATTAGGTATTATTTTATTGTATCTGTTCCAGCCATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAGAATATCATTAGGTATTATTTTATTGTATCTGTTCCAGCCATAT  450

seq1  TTATTTCTATACTAATATCTAGACTACCAAGTCTCTTTCAATTCTTAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCTATACTAATATCTAGACTACCAAGTCTCTTTCAATTCTTAATG  500

seq1  CTAACAGTTTAATCTCTAGTGGTACGTCTCTGTTTCTTAAAAATTAGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAGTTTAATCTCTAGTGGTACGTCTCTGTTTCTTAAAAATTAGACA  550

seq1  AACCAAAAACAGAGGATCTATGTTCTAATCTGTGATATTCAGTCTTCTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAAACAGAGGATCTATGTTCTAATCTGTGATATTCAGTCTTCTAA  600

seq1  TTGTCAAACTGAAACTATTAATATTCATAATTATCATTTATAAATTTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAAACTGAAACTATTAATATTCATAATTATCATTTATAAATTTGTA  650

seq1  TTAATTTATATAATTTTGTTGACTTTTTGCAATTTCTTAGACTTCTTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTATATAATTTTGTTGACTTTTTGCAATTTCTTAGACTTCTTTGA  700

seq1  TGAGTTGTCCCGGTCTTGTTTATTCTTTACCTGTGCCTTGTGTGAATTC  749
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTGTCCCGGTCTTGTTTATTCTTTACCTGTGCCTTGTGTGAATTC  749

seq1: chr18_45554231_45554752
seq2: B6Ng01-142L07.g_66_587 (reverse)

seq1  TAAACAGTCCCATATCCCCTAAAGAAATAGAAGCAGTTATTAATAGTCTC  50
      ||||||||||||||||||||||||||||||||||||||||  ||||||||
seq2  TAAACAGTCCCATATCCCCTAAAGAAATAGAAGCAGTTATACATAGTCTC  50

seq1  CCAGCCAAAAAAAGCCCAGGACCAGACGGGTTTAGTGCAGAGTTCTATCA  100
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCAGCCAAAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTATCA  100

seq1  GACCTTCAAAGAAGATCTAATTCCAGTTCTGCACAAACTTTTTCACAAGA  150
      ||||||||||||||||||||||||||||||||||||||| |||||||| |
seq2  GACCTTCAAAGAAGATCTAATTCCAGTTCTGCACAAACTATTTCACAAAA  150

seq1  TAGAAGTAGAAGGTACTCTACCCAACTCATTTTATGAAGCCACTATTACT  200
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TAGAAGTAGAAGGTACTCTACCCAACTCATTTTATGAAGCCACTCTTACT  200

seq1  CTGATACCTAAACCACAGATAGATCCAACAAAGATAGAGAACTTCAGACC  250
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACC  250

seq1  AATTTCTCTTATGAATATCGATGCAAAAATCCTCAATAAAATTCTCGCTA  300
      | |||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATTTTCTCTTATGAATATCGATACAAAAATCCTCAATAAAATTCTCGCTA  300

seq1  ACCGAATCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGAATCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGT  350

seq1  TTTATTCCAGGGATGCAGGGATGGTTTAATATACGAAAATCCATCAATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCCAGGGATGCAGGGATGGTTTAATATACGAAAATCCATCAATGT  400

seq1  AATCCACTATATAAACAAACTCAAAGACAAAAACCACATGATCATCTCGT  450
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATTATATAAACAAACTCAAAGACAAAAACCACATGATCATCTCGT  450

seq1  TAGATGCAGAAAAAGCATTTGACAAGATCCAACACCCATTCATGATAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGCAGAAAAAGCATTTGACAAGATCCAACACCCATTCATGATAAAA  500

seq1  GTTCTGGAAAGATCAGGAATTC  522
      ||||||||||||||||||||||
seq2  GTTCTGGAAAGATCAGGAATTC  522