BAC Information

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BAC

Clone NameB6Ng01-144D12
Chromosome13 (Build37)
Map Location 119,285,958 - 119,438,088
singlet/doubletdoublet
Overlap geneLOC668309
Upstream geneHcn1, LOC100041695, LOC674926, Mrps30
Downstream geneLOC100041278, Fgf10, LOC100041298, LOC100041757, Nnt, Paip1, LOC100041802, 4833420G17Rik, 3110070M22Rik, EG633640
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144D12.bB6Ng01-144D12.g
ACCDH941954DH941955
length359984
definitionDH941954|Mus musculus domesticus DNA, BAC clone: B6Ng01-144D12, 5' end.DH941955|Mus musculus domesticus DNA, BAC clone: B6Ng01-144D12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,285,958 - 119,286,316)(119,437,411 - 119,438,088)
sequence
atcaatactcattttatgttttcataataggacatagtatcataaagtat
tgaaatagtaaatttatgtcattaacattagatttatatagtactatatt
gagaatgtactagtaaatcaatttgtttattatattcctgttgttttgat
aaaatacacaaacacataaaacaaaagaaaattatttctttgagggattt
tacatatcaaaatctgaaaatacctcaaagggagaaaaattctgaaggtt
ggacataaggcacttcaagatttgaagtcaagaaaaggtatagaatttga
caaagaagatggcaatgtaggaagaaagtaaggagtgtgtgcatgtgtgt
gtgtgtgtg
gaattcttctctctgaagggatttatagatgactctatcacttctaaaaa
aaatctagatgacggacatggctacctccagacaaatctacttatataat
aaaaatacacagaccctagccttttcattcctctactgctaggcacctta
taaaaatcttcatgcatcaaaattagctatatctaatatctgtaaaaaaa
aaaccactggattttggtaaagttgaaaatagtcatgctgaagttgtaga
gcttcacattggattttacacatctatggtcagatatattttgcctcact
tatttgccatacataaaataaagaaaatcctacaatagagctaaaactag
gaaaaacgttggctttatagcttctatcatgacccatgtggccattacat
gcatctgtcctaccccatcacataaatctactcttttctcttactatcat
tattgtacccatgggtacatttatatacaccgccacacccttacagtata
ggatacctgtaagaaggagatcatgccgcttttatttcttattgaaattg
tgtgacctcacttaatattctacctctcaactccatacactttcctgcaa
attttgtaatatagtttttctataggtgaacagcatttcattatccattc
acttgctggtggtcatgtaggttgattctattctcttgctgtcatgaata
aggcagtagtaactatgagagcttaaagaactctgtggcagggtatggta
ttttacaggtgtatgtccaagagtgaaatagctgagtcataatgcaatta
caattgtaatttttggaaaaaaaatctctaatggatttccgactggccct
attcataatccacccagcactgaataagctttatatttctccatctcctc
tctacgtttgatgtcagatttctttatgatggccagtctgactgggatga
ggtgtttcatttttaataaatatacagcctgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_119285958_119286316
seq2: B6Ng01-144D12.b_50_408

seq1  ATCAATACTCATTTTATGTTTTCATAATAGGACATAGTATCATAAAGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATACTCATTTTATGTTTTCATAATAGGACATAGTATCATAAAGTAT  50

seq1  TGAAATAGTAAATTTATGTCATTAACATTAGATTTATATAGTACTATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATAGTAAATTTATGTCATTAACATTAGATTTATATAGTACTATATT  100

seq1  GAGAATGTACTAGTAAATCAATTTGTTTATTATATTCCTGTTGTTTTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGTACTAGTAAATCAATTTGTTTATTATATTCCTGTTGTTTTGAT  150

seq1  AAAATACACAAACACATAAAACAAAAGAAAATTATTTCTTTGAGGGATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACACAAACACATAAAACAAAAGAAAATTATTTCTTTGAGGGATTT  200

seq1  TACATATCAAAATCTGAAAATACCTCAAAGGGAGAAAAATTCTGAAGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATCAAAATCTGAAAATACCTCAAAGGGAGAAAAATTCTGAAGGTT  250

seq1  GGACATAAGGCACTTCAAGATTTGAAGTCAAGAAAAGGTATAGAATTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATAAGGCACTTCAAGATTTGAAGTCAAGAAAAGGTATAGAATTTGA  300

seq1  CAAAGAAGATGGCAATGTAGGAAGAAAGTAAGGAGTGTGTGCATGTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAGATGGCAATGTAGGAAGAAAGTAAGGAGTGTGTGCATGTGTGT  350

seq1  GTGTGTGTG  359
      |||||||||
seq2  GTGTGTGTG  359

seq1: chr13_119437411_119438088
seq2: B6Ng01-144D12.g_70_747 (reverse)

seq1  GAATCAACCTACATGACCACCAGCAAGTGAATGGATAATGAAATGCTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCAACCTACATGACCACCAGCAAGTGAATGGATAATGAAATGCTGTT  50

seq1  CACCTATAGAAAAACTATATTACAAAATTTGCAGGAAAGTGTATGGAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTATAGAAAAACTATATTACAAAATTTGCAGGAAAGTGTATGGAGTT  100

seq1  GAGAGGTAGAATATTAAGTGAGGTCACACAATTTCAATAAGAAATAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGTAGAATATTAAGTGAGGTCACACAATTTCAATAAGAAATAAAAG  150

seq1  CGGCATGATCTCCTTCTTACAGGTATCCTATACTGTAAGGGTGTGGCGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCATGATCTCCTTCTTACAGGTATCCTATACTGTAAGGGTGTGGCGGT  200

seq1  GTATATAAATGTACCCATGGGTACAATAATGATAGTAAGAGAAAAGAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATAAATGTACCCATGGGTACAATAATGATAGTAAGAGAAAAGAGTA  250

seq1  GATTTATGTGATGGGGTAGGACAGATGCATGTAATGGCCACATGGGTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATGTGATGGGGTAGGACAGATGCATGTAATGGCCACATGGGTCAT  300

seq1  GATAGAAGCTATAAAGCCAACGTTTTTCCTAGTTTTAGCTCTATTGTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAAGCTATAAAGCCAACGTTTTTCCTAGTTTTAGCTCTATTGTAGG  350

seq1  ATTTTCTTTATTTTATGTATGGCAAATAAGTGAGGCAAAATATATCTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTTATTTTATGTATGGCAAATAAGTGAGGCAAAATATATCTGAC  400

seq1  CATAGATGTGTAAAATCCAATGTGAAGCTCTACAACTTCAGCATGACTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGATGTGTAAAATCCAATGTGAAGCTCTACAACTTCAGCATGACTAT  450

seq1  TTTCAACTTTACCAAAATCCAGTGGTTTTTTTTTTACAGATATTAGATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAACTTTACCAAAATCCAGTGGTTTTTTTTTTACAGATATTAGATAT  500

seq1  AGCTAATTTTGATGCATGAAGATTTTTATAAGGTGCCTAGCAGTAGAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATTTTGATGCATGAAGATTTTTATAAGGTGCCTAGCAGTAGAGGA  550

seq1  ATGAAAAGGCTAGGGTCTGTGTATTTTTATTATATAAGTAGATTTGTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAGGCTAGGGTCTGTGTATTTTTATTATATAAGTAGATTTGTCTG  600

seq1  GAGGTAGCCATGTCCGTCATCTAGATTTTTTTTAGAAGTGATAGAGTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAGCCATGTCCGTCATCTAGATTTTTTTTAGAAGTGATAGAGTCAT  650

seq1  CTATAAATCCCTTCAGAGAGAAGAATTC  678
      ||||||||||||||||||||||||||||
seq2  CTATAAATCCCTTCAGAGAGAAGAATTC  678