BAC Information

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BAC

Clone NameB6Ng01-144G19
Chromosome13 (Build37)
Map Location 66,826,169 - 66,827,238
singlet/doubletsinglet
Overlap geneLOC666027
Upstream geneLOC628722, LOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746, LOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106
Downstream geneLOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144G19.bB6Ng01-144G19.g
ACCDH942105DH942106
length1,2271,064
definitionDH942105|Mus musculus domesticus DNA, BAC clone: B6Ng01-144G19, 5' end.DH942106|Mus musculus domesticus DNA, BAC clone: B6Ng01-144G19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttttacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcctttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagatgttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaggattgccattt
ttacaatgttgatcctgccaatccatgagcatgggaaatctttccatctt
ctgagatcttctttaattttctttcttcagagacttgaagtttttatcat
acagatctttcactttctttagttagagtcacgccagatatttttatata
tttgtgactattgagaagggtgttgtttccctaattttctttctcagcct
tgtttattctttgtgtagagaaggccattgacttgttggagtattttata
tcagctacttcaccgagcctgttatcaagttagagttctctggtggactt
tagggtccttataatcatatctattcgctgccgaaaggaaatgactcctt
ttccaattgatcctggatcccttgtgcgatgctggctaactcagtactgt
gtgtgataagtcaaggtgatgagatgt
gaattccaaagaagcaggccataatgtcagtgaaagaatgaacttgccaa
gaagagtgagggcaagcaggcaaagatcaagtttcctttttccacattct
ttataggctgccaccagaagatgtggcccaggtttaaaggtgcatcttct
caaaaagacctgaatttagggtgagtcttcacacttcaactgattaatca
agaaaagtctttcacaggtgtactcagtcacttggattttagttaattct
agatgtagtcaacttgacaatcaaaaataccagcctgagctacatgacat
tctatctcaaaataaaggatataaaatagagacagatgtatctctcaatg
ggtagaggtgtttgctgccaagctgacaacctgaacatgactcccaggac
ccacgtgatagaaggaaaaaaaaatcaactaatatgaattgtcctctgac
ctccatacatatggacacattaattaattaaaatgcactaacatatttaa
aaaattaaaaagtagtaattacatcagcacacaactaccatattttaaca
gaaaaaaattataaattagtaattagaggaaagttccaccttaatatttt
gtaccatcattctagacaactgtttagtcaaaaaagagatttaaaagaaa
aatccttgggactgggtagataagatagctcagtgataaacagtgagtat
tgctcttccagaggacccaagttcagttcccagcttccatatgaggcagt
tcacaatcacctgtaactccagccctaggggatctgacacctttagcttc
tatcagcacctgcctgcatagatgtgcacataattacacacactattaat
aagtatttaaaataaatattttaataacgaaaactcatctgcgtgtagta
cacacctctttaatcccagccctcaagaggcagaggtgggccaacctggt
ctacatagcacgttcccatccagaattccatagaaagaattctatctcca
aaagaaaagaatgagaagagagaagagaaggggcaaggggaaggtgaaaa
gaagggaaagggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_66826169_66827238
seq2: B6Ng01-144G19.g_65_1128

seq1  GAATTCCAAAGAAGCAGGCCATAATGTCAGTGAAAGAATGAACTTGCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGAAGCAGGCCATAATGTCAGTGAAAGAATGAACTTGCCAA  50

seq1  GAAGAGTGAGGGCAAGCAGGCAAAGATCAAGTTTCCTTTTTCCACATTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTGAGGGCAAGCAGGCAAAGATCAAGTTTCCTTTTTCCACATTCT  100

seq1  TTATAGGCTGCCACCAGAAGATGTGGCCCAGGTTTAAAGGTGCATCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGGCTGCCACCAGAAGATGTGGCCCAGGTTTAAAGGTGCATCTTCT  150

seq1  CAAAAAGACCTGAATTTAGGGTGAGTCTTCACACTTCAACTGATTAATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGACCTGAATTTAGGGTGAGTCTTCACACTTCAACTGATTAATCA  200

seq1  AGAAAAGTCTTTCACAGGTGTACTCAGTCACTTGGATTTTAGTTAATTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGTCTTTCACAGGTGTACTCAGTCACTTGGATTTTAGTTAATTCT  250

seq1  AGATGTAGTCAACTTGACAATCAAAAATACCAGCCTGAGCTACATGACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTAGTCAACTTGACAATCAAAAATACCAGCCTGAGCTACATGACAT  300

seq1  TCTATCTCAAAATAAAGGATATAAAATAGAGACAGATGTATCTCTCAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTCAAAATAAAGGATATAAAATAGAGACAGATGTATCTCTCAATG  350

seq1  GGTAGAGGTGTTTGCTGCCAAGCTGACAACCTGAACATGACTCCCAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAGGTGTTTGCTGCCAAGCTGACAACCTGAACATGACTCCCAGGAC  400

seq1  CCACGTGATAGAAGGAAAAAAAAATCAACTAATATGAATTGTCCTCTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGTGATAGAAGGAAAAAAAAATCAACTAATATGAATTGTCCTCTGAC  450

seq1  CTCCATACATATGGACACATTAATTAATTAAAATGCACTAACATATTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATACATATGGACACATTAATTAATTAAAATGCACTAACATATTTAA  500

seq1  AAAATTAAAAAGTAGTAATTACATCAGCACACAACTACCATATTTTAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAAAAAGTAGTAATTACATCAGCACACAACTACCATATTTTAACA  550

seq1  GAAAAAAATTATAAATTAGTAATTAGAGGAAAGTTCCACCTTAATATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAATTATAAATTAGTAATTAGAGGAAAGTTCCACCTTAATATTTT  600

seq1  GTACCATCATTCTAGACAACTGTTTAGTCAAAAAAGAGATTTAAAAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCATCATTCTAGACAACTGTTTAGTCAAAAAAGAGATTTAAAAGAAA  650

seq1  AATCCTTGGGACTGGGTAGATAAGATAGCTCAGTGATAAACAGTGAGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTTGGGACTGGGTAGATAAGATAGCTCAGTGATAAACAGTGAGTAT  700

seq1  TGCTCTTCCAGAGGACCCAAGTTCAGTTCCCAGCTTCCATATGAGGCAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTCCAGAGGACCCAAGTTCAGTTCCCAGCTTCCATATGAGGCAGT  750

seq1  TCACAATCACCTGTAACTCCAGCCCTAGGGGATCTGACACCTTTAGCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATCACCTGTAACTCCAGCCCTAGGGGATCTGACACCTTTAGCTTC  800

seq1  TATCAGCACCTGCCTGCATAGATGTGCACATAATTACACACACTATTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGCACCTGCCTGCATAGATGTGCACATAATTACACACACTATTAAT  850

seq1  AAGTATTTAAAATAAATATTTTAATAACGAAAACTCATCTGCGTGTAGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAGTATTTAAAATAAATATTTTAATAACGAAAACTCATCTGCGTGTAGT-  899

seq1  ACACACCTCTTTAATCCCAGCCCTCAAGAGGCAGAGGTGGGCCAACCTGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCTCTTTAATCCCAGCCCTCAAGAGGCAGAGGTGGGCCAACCTGG  949

seq1  TCTACATAGCACGTTCCCATCCAGAATTCCATAGAAAG-ATTCTATCTCC  999
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TCTACATAGCACGTTCCCATCCAGAATTCCATAGAAAGAATTCTATCTCC  999

seq1  AAAAAGAAAAGGAATGAGAAGAAGAGAAGAGAAGGGGGCAAGGGGGAAGG  1049
       ||||||||| |||||||||| ||||||||||| |||||||||||  | |
seq2  -AAAAGAAAA-GAATGAGAAG-AGAGAAGAGAA-GGGGCAAGGGG--AAG  1043

seq1  GTGAAAAGAAGGGAAAGGGAG  1070
      |||||||||||||||||||||
seq2  GTGAAAAGAAGGGAAAGGGAG  1064