BAC Information

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BAC

Clone NameB6Ng01-145B03
Chromosome13 (Build37)
Map Location 62,774,792 - 62,959,210
singlet/doubletdoublet
Overlap geneEG630978, EG435366, LOC380850, LOC630951, Fbp2
Upstream geneLOC624140, EG623505, LOC665415, LOC673332, BC052688, EG638502, LOC100041382, EG633250, EG624180, LOC100041420, LOC665444, EG630579, EG630594, LOC665455, LOC100041430, LOC100041962, LOC100041437, LOC100041979, LOC100041986, 8430426H19Rik, LOC100041455, 6720457D02Rik, EG665503, LOC100041493, LOC630857
Downstream geneFbp1, LOC100042090, EG665524, 2010111I01Rik, Fancc, Ptch1, C030010C08Rik, 0610007P08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145B03.bB6Ng01-145B03.g
ACCDH942578DH942579
length1,119443
definitionDH942578|Mus musculus domesticus DNA, BAC clone: B6Ng01-145B03, 5' end.DH942579|Mus musculus domesticus DNA, BAC clone: B6Ng01-145B03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,774,792 - 62,775,489)(62,958,762 - 62,959,210)
sequence
gaattcttctatgcgactggaggttactatgttgtgaaaaggctttctca
cattcattacatttgaagggtttctctccagcatgtattcttatatgtat
ttggagcgtactatgcctggaaaagactttgtcacattgattacatttat
agggtttctctcctgtatgtgttctcttatgtatttggagactatgatgt
tgggaaaaggctttgtcacactgattacatttgtagggtttttctcctgt
atgtattcttctatgcttctggagatcactgctttgtctaaatactttat
cacattcattacatttgtagggtttctctcctgtatgtattcttttatgc
ttttggagactatgatgttgggaaaaggctttgtcacattgatgacattt
gtagggtttctctcctgtatgtattcttttatgcttttggagattacagt
gttctgaaaaggctttaccacattgatcacatttgtagggtttctctcca
gtatgaattcttccatgccttttaagccgactatgttgtgaaaaggcttt
accacacagatcacattcatagcatttctctccagtatgtcttcctttag
gttgtaggagattactgtgacttgaaaaggctttttcccactggtgacat
tcataaggtttctctcccataagaattccttcatagcttttaagatgact
gtgatcttcaaaggctttaccacattgcttccattcatagagtttctttc
cagtttgtactcttttacgaagttggagactatgtttgagcaaaggcttc
aacaaattgaataactccatggggtttcttttctctatgaatcctttcat
gcctttgagcatgactgtgagcatgtaaagcaaatgctttaccaccttga
gtatattcagagggtttctctgcactctgaattctttcatgcctgagaag
agattggcacatgtgaaagtttatcacactgatgaatactttcatctgta
tgattaatgttactatttgtctaaatattaagaggaatcagatctaagat
cttatactttgctgtttcattcacgctgtaaccttcacatatgggtggtt
ttcagctcaagatacctga
tcattacttatatttgcaaagtcttaatgggactttaaaatgtgttttga
tgccttttttttttttttttttttttaccccgtacaggtgtgttcagttg
tcatgacctctgtcagtattgtggggtagaaatcaccagaacacaggtta
agggggcttgactgtcatgaaaagaacctggctcagttttctccatcttc
acgtggtgttcaggaatctggacaggctgggctggggcaggcacagcaga
gcacctttgcttggttctcttttgcaaaacagggccacgttcatgctgga
gttgctcttggccacagccaggagtacggttttaaggcatgatgaaaaga
aatcacttcctttggacttccattttgattccagtgaagggcccctctga
agtcgaaggaagggacatacatgtgtgtgtgtgtggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_62774792_62775489
seq2: B6Ng01-145B03.b_476_1162

seq1  GCTTTTGGAGATTACAGTGTTCTGAAAAGGCTTTACCACATTGATCACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGGAGATTACAGTGTTCTGAAAAGGCTTTACCACATTGATCACAT  50

seq1  TTGTAGGGTTTCTCTCCAGTATGAATTCTTCCATGCCTTTTAAGCCGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGGGTTTCTCTCCAGTATGAATTCTTCCATGCCTTTTAAGCCGACT  100

seq1  ATGTTGTGAAAAGGCTTTACCACACAGATCACATTCATAGCATTTCTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGTGAAAAGGCTTTACCACACAGATCACATTCATAGCATTTCTCTC  150

seq1  CAGTATGTCTTCCTTTAGGTTGTAGGAGATTACTGTGACTTGAAAAGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATGTCTTCCTTTAGGTTGTAGGAGATTACTGTGACTTGAAAAGGCT  200

seq1  TTTTCCCACTGGTGACATTCATAAGGTTTCTCTCCCATAAGAATTCCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCACTGGTGACATTCATAAGGTTTCTCTCCCATAAGAATTCCTTC  250

seq1  ATAGCTTTTAAGATGACTGTGATCTTCAAAGGCTTTACCACATTGCTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTTTTAAGATGACTGTGATCTTCAAAGGCTTTACCACATTGCTTCC  300

seq1  ATTCATAGAGTTTCTTTCCAGTTTGTACTCTTTTACGAAGTTGGAGACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAGAGTTTCTTTCCAGTTTGTACTCTTTTACGAAGTTGGAGACTA  350

seq1  TG-TTGAGCAAAGGCTTCAACAAATTGAATAACTCCATGGGGTTTCTTTT  399
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGAGCAAAGGCTTCAACAAATTGAATAACTCCATGGGGTTTCTTTT  400

seq1  CTCTATGAATCCTTTCATGCCTTTGAGCATGACTGTGAGCATGTAAAGCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGAATCCTTTCATGCCTTTGAGCATGACTGTGAGCATGTAAAGCA  450

seq1  AATGCTTTACCACCTTGAGTATATTCAGAGGGTTTCTCTGCACTCTGAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTTACCACCTTGAGTATATTCAGAGGGTTTCTCTGCACTCTGAAT  500

seq1  TCTTTCATGCCTGAGAAGAGAATTGGCACATGTGAAAGTTTTATCACACT  549
      |||||||||||||||||||| ||||||||||||||||| |||||||||||
seq2  TCTTTCATGCCTGAGAAGAG-ATTGGCACATGTGAAAG-TTTATCACACT  548

seq1  GATGAATACTTTCATCTGTATGATTTAATGTTACTATTTGTCTAAATATT  599
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GATGAATACTTTCATCTGTATGA-TTAATGTTACTATTTGTCTAAATATT  597

seq1  AAGAGGAATCAGATCTTAAGATCTTTATCACTTTGCTGTTTATCATTCAC  649
      ||||||||||||||| ||||||| |||| |||||||||||  ||||||||
seq2  AAGAGGAATCAGATC-TAAGATC-TTAT-ACTTTGCTGTT--TCATTCAC  642

seq1  GCTGTTACCCCTTCAC-TATGGGTTGTTTTTCAGCTTCAAAGATACCTGA  698
      ||||| |  ||||||| |||||| || |||||||||   |||||||||||
seq2  GCTGTAA--CCTTCACATATGGG-TGGTTTTCAGCT--CAAGATACCTGA  687

seq1: chr13_62958762_62959210
seq2: B6Ng01-145B03.g_67_515 (reverse)

seq1  CCCCCCCCCACACACACACACATGTATGTCCCTTCCTTCGACTTCAGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCACACACACACACATGTATGTCCCTTCCTTCGACTTCAGAGG  50

seq1  GGCCCTTCACTGGAATCAAAATGGAAGTCCAAAGGAAGTGATTTCTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTTCACTGGAATCAAAATGGAAGTCCAAAGGAAGTGATTTCTTTTC  100

seq1  ATCATGCCTTAAAACCGTACTCCTGGCTGTGGCCAAGAGCAACTCCAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGCCTTAAAACCGTACTCCTGGCTGTGGCCAAGAGCAACTCCAGCA  150

seq1  TGAACGTGGCCCTGTTTTGCAAAAGAGAACCAAGCAAAGGTGCTCTGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACGTGGCCCTGTTTTGCAAAAGAGAACCAAGCAAAGGTGCTCTGCTG  200

seq1  TGCCTGCCCCAGCCCAGCCTGTCCAGATTCCTGAACACCACGTGAAGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCCCCAGCCCAGCCTGTCCAGATTCCTGAACACCACGTGAAGATG  250

seq1  GAGAAAACTGAGCCAGGTTCTTTTCATGACAGTCAAGCCCCCTTAACCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAACTGAGCCAGGTTCTTTTCATGACAGTCAAGCCCCCTTAACCTG  300

seq1  TGTTCTGGTGATTTCTACCCCACAATACTGACAGAGGTCATGACAACTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGGTGATTTCTACCCCACAATACTGACAGAGGTCATGACAACTGA  350

seq1  ACACACCTGTACGGGGTAAAAAAAAAAAAAAAAAAAAAAGGCATCAAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCTGTACGGGGTAAAAAAAAAAAAAAAAAAAAAAGGCATCAAAAC  400

seq1  ACATTTTAAAGTCCCATTAAGACTTTGCAAATATAAGTAATGAGAATTC  449
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTAAAGTCCCATTAAGACTTTGCAAATATAAGTAATGAGAATTC  449