BAC Information

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BAC

Clone NameB6Ng01-145G24
Chromosome13 (Build37)
Map Location 92,097,343 - 92,098,051
singlet/doubletsinglet
Overlap geneRasgrf2
Upstream geneAtg10, LOC100042959, Ssbp2, LOC666889, Acot12, Zcchc9, Ckmt2
Downstream geneRasgrf2, Msh3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145G24.bB6Ng01-145G24.g
ACCDH942839DH942840
length1,1711,101
definitionDH942839|Mus musculus domesticus DNA, BAC clone: B6Ng01-145G24, 5' end.DH942840|Mus musculus domesticus DNA, BAC clone: B6Ng01-145G24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctacatgcagccatccagtttggccagcaccatttgctgcagatg
ctgtctttttttctggtgtatatttctgacttctttatttaaaaaatcac
atatgtatagaaatgagaatttatggttcatacattcaattccattgatc
aacatgcctgtttttgtgccaataccacactgtttttattgctattgttc
tatagtacaatttgagatcagagattatgatacttccagttcttttatta
tgtatatttttagctatcctgacctttttgtgttttcatatgaagctgaa
agttgtcctttcgatttctgtgaagagttggacttttgatgaggattgcg
ttgactatagattgcttttggtaggttgcccattctcactatatgaattc
tactgatccatgagcatgggagatctttccatattctaatatcttcttca
atttcttgctttaatgtcttaaaatttttattacacaagtattttcattt
gcttgggtagagttaccccaagattttatgtttgactttttttttttttt
tgaggctattatgagaggcattgtctccttgatttctttctcattttgtt
tgtcatttgtatacaagaagactactgtttttgttttttgagataatttt
ttatccaactactttgcagaaagtgtttatcagctataggagtttcctgg
caaaaattttagggtcatttacatatactgtcataatatttgcaaataaa
gatactttgacttcttcttttcctgtttgtatacccttgatctcctccag
ttgtcttatttctttggataaaacttttagtacactattgaataggtatg
ggagagagtggacagctttgacttgttcctgattttagtgaaactacttt
gagtgtcttttccatttagttgatgttgctatggcttggtgtaatactct
ttgtttgtgaggtgtgacccttgtatctataatctcctttatgactcctt
atcataaaggggcgttgcattttctcaaagggctctcagattattttaca
taatatttgagggagatggaaattcatcctctgaaagtagtgacttcaac
tgaatcatactgattctggtttaattgattaagaactttgaatactgctc
aattacatgggtatacgtgtt
gaattcagtttgcatttggggtatcctgtacttacaggaaacacaggctt
cagtttcttctttgtgtttgccctcttggccacagtcttccctgactagt
gcagaagtcctgtggcttacagcccttcctgccatgacccacagccattg
actagatctctagtggtgtgaggtgtgatgtcggagaggaggcatctgtg
tctcccagtagaaagtagtgtttggaaaactcagtctcagagctgtggtt
tctctgcagaacagcttctatccctgcctgccccatacttccatggctgc
agcctttcctcccttgaattcccgatccctgtggatttcactttccctgg
aggtaaaacagaaagtgccagaacgggaagagtggcttcccgaagctgat
gagtctctgctgtgtctttttcctttaaaagaatgcctttattaaataaa
agtgttgggcacattccatgttcctcctctcctctccctacaagaaccat
gaagagatctcgctcctgtctctactgtgaacccacaagtgtttcccaaa
gtaaattccactaaagtgtggagccacctcagagtgtgaccctcagtctc
ctcaagttcatttctgaaccattgtcatactccagtcgggaagcaaaatg
accactcgatgctaccactaaacagttctagtggcctgctcgatctgggc
gcaccttggatcatctctctggatacaccttctcttcagacttggggcag
ccatttgtcttacagcttagtttttctgttgtgtctgagaaacttttttt
agtttagtttgcccagatttttcttgtggtaagcacaaatgtgataaatt
ccaagatgatacatgttggagctaaactaaagtttttatgtggtggggac
tttttttccatagcattttttcatgtttttttttcctctataatttaatt
tatttattccattttttcatccccatcacaagtcctctctccactgactc
ccagtccccccctcacagattccctcccttccatttccccctcccaatta
ccctctgaagagggagaaggttcccctggggtaccaaacctatccccact
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_92097343_92098051
seq2: B6Ng01-145G24.g_446_1169 (reverse)

seq1  GAGTGGG--TAGG-TTGGTA-CCCAGGGGAACC-TCTCCCTTCTCAGA-G  44
      |||||||  |||| |||||| |||||||||||| |||||||  ||||| |
seq2  GAGTGGGGATAGGTTTGGTACCCCAGGGGAACCTTCTCCCTCTTCAGAGG  50

seq1  GTAAATGGGA-GGGGAGATGG-AGGGAGGGATCATGTGA-GGGGGGACT-  90
      |||| ||||| ||||| |||| |||||||||   ||||| ||||||||| 
seq2  GTAATTGGGAGGGGGAAATGGAAGGGAGGGAATCTGTGAGGGGGGGACTG  100

seq1  GGAGTCAGTGGAGAGAGGAC-TGTGATGGGGATGAAAAA--TGAATAAAT  137
      |||||||||||||||||||| ||||||||||||||||||   ||||||||
seq2  GGAGTCAGTGGAGAGAGGACTTGTGATGGGGATGAAAAAATGGAATAAAT  150

seq1  AAATTAAATTATAGAG--AAAAAAAACATGAAAAAATGCTATGG-AAAAA  184
      ||||||||||||||||  |||||||||||||||||||||||||| |||||
seq2  AAATTAAATTATAGAGGAAAAAAAAACATGAAAAAATGCTATGGAAAAAA  200

seq1  AGT-CCCACCACATAAAAACTTTAGTTTTAGCTCCAACATGTAATCATCT  233
      ||| ||||||||||||||||||||| |||||||||||||||| |||||||
seq2  AGTCCCCACCACATAAAAACTTTAG-TTTAGCTCCAACATGT-ATCATCT  248

seq1  TGGAATTTATCACATTTGTGCTTACCACAAGAAAAATCTGGGCAAACTAA  283
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGGAATTTATCACATTTGTGCTTACCACAAGAAAAATCTGGGCAAACT-A  297

seq1  AACTAAAAAAAGTTTCTCAGACACAACAG-AAAACTAAGCTGTAAGACAA  332
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AACTAAAAAAAGTTTCTCAGACACAACAGAAAAACTAAGCTGTAAGACAA  347

seq1  ATGGCTGCCCCAAGTCTGAAGAGAAGGTGTATCCAGAGAGATGATCCAAG  382
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTGCCCCAAGTCTGAAGAGAAGGTGTATCCAGAGAGATGATCCAAG  397

seq1  GTGCGCCCAGATCGAGCAGGCCACTAGAACTGTTTAGTGGTAGCATCGAG  432
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGCCCAGATCGAGCAGGCCACTAGAACTGTTTAGTGGTAGCATCGAG  447

seq1  TGGTCATTTTGCTTCCCGACTGGAGTATGACAATGGTTCAGAAATGAACT  482
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCATTTTGCTTCCCGACTGGAGTATGACAATGGTTCAGAAATGAACT  497

seq1  TGAGGAGACTGAGGGTCACACTCTGAGGTGGCTCCACACTTTAGTGGAAT  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGACTGAGGGTCACACTCTGAGGTGGCTCCACACTTTAGTGGAAT  547

seq1  TTACTTTGGGAAACACTTGTGGGTTCACAGTAGAGACAGGAGCGAGATCT  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTGGGAAACACTTGTGGGTTCACAGTAGAGACAGGAGCGAGATCT  597

seq1  CTTCATGGTTCTTGTAGGGAGAGGAGAGGAGGAACATGGAATGTGCCCAA  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATGGTTCTTGTAGGGAGAGGAGAGGAGGAACATGGAATGTGCCCAA  647

seq1  CACTTTTATTTAATAAAGGCATTCTTTTAAAGGAAAAAGACACAGCAGAG  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTATTTAATAAAGGCATTCTTTTAAAGGAAAAAGACACAGCAGAG  697

seq1  ACTCATCAGCTTCGGGAAGCCACTCTT  709
      |||||||||||||||||||||||||||
seq2  ACTCATCAGCTTCGGGAAGCCACTCTT  724