BAC Information

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BAC

Clone NameB6Ng01-146H22
Chromosome13 (Build37)
Map Location 60,276,911 - 60,433,281
singlet/doubletdoublet
Overlap geneGas1, EG328264
Upstream geneLOC100041533, Agtpbp1, Mak10, Golph2, 4921517D22Rik, 1700013B16Rik, EG238662, 4932411G14Rik, Isca1, Zcchc6, LOC100041267
Downstream geneDapk1, LOC218274, BC051665, 2310051M13Rik, 4930486L24Rik, Tpbpb, Ctla2a, Tpbpa, Ctsj, Ctsq, Ctsr, Cts6, Cts8, Cts8-ps, LOC435362
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146H22.bB6Ng01-146H22.g
ACCDH943625DH943626
length743996
definitionDH943625|Mus musculus domesticus DNA, BAC clone: B6Ng01-146H22, 5' end.DH943626|Mus musculus domesticus DNA, BAC clone: B6Ng01-146H22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,432,539 - 60,433,281)(60,276,911 - 60,277,900)
sequence
gaattctggaaaactgtagaaaagtgccagaaaaggaaaaacgttccaat
ggtcacatgtgtatggacgtctcctggaaaaagattgtttttaaaggtgt
atttaaaagatctaaattgactgcttggaggagctgaggattcgttcatg
tctgtgttgggctgttcctaggggccactgacttcaggcttagtgagagt
cccaagtccaaataagaagtctaccagctggccatataccacacacctca
cccatcagacccagagcctcccttcctacctcttgctcaaatgtaggttc
tcagttcccttcaagtccatgcagaatcgggtgagttagtcatctgggga
agtcattggtggcctttccccatcccctggtctttaggagagtttcaaag
tcctgctgaccagaatttggatgacggtctcctgtgtgacattctgcatt
ttatcctgagcgacaaactactaactgaggaggaggcactctactgtgac
actgtgtgatacttctatgctcttcaaatctcaatactctgccatctgtg
atatccttgactccagggtcagggctaagcaagattgtctgactgtctgt
tagaaaagcacacagttaaattcgggagcatgcttcacactgagtggaca
ttatgaccattgcaagccatgtctcatcaatactgctatgaagaggttaa
tagtccccctccctggctttgtgtgtagggtgtgtgtgtgtgt
gaattctgcagattagagctggcagtatagatcagccggttatctctgca
gcctggaaaaccgcacagaagagggccgaacatgttggctgcggtacgag
ctgggccctgtccacccaggaagagtgtgggtcagtgttcccgaccatct
ccggtctccgagccacaggtgccctgctcgggaaccagctgggtcgtgca
taccggcctggagcagcctgcagcaggggcgcaggagctacaagtgtgac
ccgagcagcaggagcaacagcagcagcaaacaggcaaacggggtccaggc
gcttcgattcgcccagtggcctccactgccgctgctgctgctcctgcgcc
cgggaccgtggggcaagtctccgcggccgcccgccgcagcagcgccgccg
cccgggcgcgcaaggccgtcgtcgtcgtccaggggttgctcgccgcccgc
ggccccagcgcgctgctcgtcgtcatattcttcgtcgtagtagtcgtcca
ggcccccgtccgagccgctgctgcccggaccgttgctcgcatctgggccg
aagcacaggcgggccatgttctcttttgaccgattcgcagatgggccgct
ccagcccatcgcacacgcagtcgttgagcagcgccgccttgggcacggcc
agcatgtcctcgatgaccgcgcggcactcgtctgtgcagcgcagcccgtt
gaaaagcttgccgcagtaggccaggtagcggctgagcgccaggttgcagc
ggctgtcccggtcgcagcgccgccgggcctcagtgcagcccatgaccgag
ctcgcttcccgcgcccgggcccacgctgctggtgcgcggcagacagggct
cgatggcgcgcttggtggacctgcagtgttcgtccttgcgcgcagtcgca
gtcctccagcgcgggcccgcggcgcgtgttggttgagctgggattagccg
tcgagatgcatgggctctggcagcgccagcccgccaaggacgcggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_60432539_60433281
seq2: B6Ng01-146H22.b_49_791 (reverse)

seq1  ACACACACACACACCCTACACACAAAGCCAGGGAGGGGGACTATTAACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACCCTACACACAAAGCCAGGGAGGGGGACTATTAACCT  50

seq1  CTTCATAGCAGTATTGATGAGACATGGCTTGCAATGGTCATAATGTCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATAGCAGTATTGATGAGACATGGCTTGCAATGGTCATAATGTCCAC  100

seq1  TCAGTGTGAAGCATGCTCCCGAATTTAACTGTGTGCTTTTCTAACAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTGAAGCATGCTCCCGAATTTAACTGTGTGCTTTTCTAACAGACA  150

seq1  GTCAGACAATCTTGCTTAGCCCTGACCCTGGAGTCAAGGATATCACAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGACAATCTTGCTTAGCCCTGACCCTGGAGTCAAGGATATCACAGAT  200

seq1  GGCAGAGTATTGAGATTTGAAGAGCATAGAAGTATCACACAGTGTCACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGTATTGAGATTTGAAGAGCATAGAAGTATCACACAGTGTCACAG  250

seq1  TAGAGTGCCTCCTCCTCAGTTAGTAGTTTGTCGCTCAGGATAAAATGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTGCCTCCTCCTCAGTTAGTAGTTTGTCGCTCAGGATAAAATGCAG  300

seq1  AATGTCACACAGGAGACCGTCATCCAAATTCTGGTCAGCAGGACTTTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCACACAGGAGACCGTCATCCAAATTCTGGTCAGCAGGACTTTGAA  350

seq1  ACTCTCCTAAAGACCAGGGGATGGGGAAAGGCCACCAATGACTTCCCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCCTAAAGACCAGGGGATGGGGAAAGGCCACCAATGACTTCCCCAG  400

seq1  ATGACTAACTCACCCGATTCTGCATGGACTTGAAGGGAACTGAGAACCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTAACTCACCCGATTCTGCATGGACTTGAAGGGAACTGAGAACCTA  450

seq1  CATTTGAGCAAGAGGTAGGAAGGGAGGCTCTGGGTCTGATGGGTGAGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGAGCAAGAGGTAGGAAGGGAGGCTCTGGGTCTGATGGGTGAGGTG  500

seq1  TGTGGTATATGGCCAGCTGGTAGACTTCTTATTTGGACTTGGGACTCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTATATGGCCAGCTGGTAGACTTCTTATTTGGACTTGGGACTCTCA  550

seq1  CTAAGCCTGAAGTCAGTGGCCCCTAGGAACAGCCCAACACAGACATGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCCTGAAGTCAGTGGCCCCTAGGAACAGCCCAACACAGACATGAAC  600

seq1  GAATCCTCAGCTCCTCCAAGCAGTCAATTTAGATCTTTTAAATACACCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCTCAGCTCCTCCAAGCAGTCAATTTAGATCTTTTAAATACACCTT  650

seq1  TAAAAACAATCTTTTTCCAGGAGACGTCCATACACATGTGACCATTGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACAATCTTTTTCCAGGAGACGTCCATACACATGTGACCATTGGAA  700

seq1  CGTTTTTCCTTTTCTGGCACTTTTCTACAGTTTTCCAGAATTC  743
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTTTCCTTTTCTGGCACTTTTCTACAGTTTTCCAGAATTC  743

seq1: chr13_60276911_60277900
seq2: B6Ng01-146H22.g_68_1063

seq1  GAATTCTGCAGATTAGAGCTGGCAGTATAGATCAGCCGGTTATCTCTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCAGATTAGAGCTGGCAGTATAGATCAGCCGGTTATCTCTGCA  50

seq1  GCCTGGAAAACCGCACAGAAGAGGGCCGAACATGTTGGCTGCGGTACGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGAAAACCGCACAGAAGAGGGCCGAACATGTTGGCTGCGGTACGAG  100

seq1  CTGGGCCCTGTCCACCCAGGAAGAGTGTGGGTCAGTGTTCCCGACCATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCCCTGTCCACCCAGGAAGAGTGTGGGTCAGTGTTCCCGACCATCT  150

seq1  CCGGTCTCCGAGCCACAGGTGCCCTGCTCGGGAACCAGCTGGGTCGTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTCTCCGAGCCACAGGTGCCCTGCTCGGGAACCAGCTGGGTCGTGCA  200

seq1  TACCGGCCTGGAGCAGCCTGCAGCAGGGGCGCAGGAGCTACAAGTGTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCGGCCTGGAGCAGCCTGCAGCAGGGGCGCAGGAGCTACAAGTGTGAC  250

seq1  CCGAGCAGCAGGAGCAACAGCAGCAGCAAACAGGCAAACGGGGTCCAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGCAGCAGGAGCAACAGCAGCAGCAAACAGGCAAACGGGGTCCAGGC  300

seq1  GCTTCGATTCGCCCAGTGGCCTCCACTGCCGCTGCTGCTGCTCCTGCGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCGATTCGCCCAGTGGCCTCCACTGCCGCTGCTGCTGCTCCTGCGCC  350

seq1  CGGGACCGTGGGGCAAGTCTCCGCGGCCGCCCGCCGCAGCAGCGCCGCCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGACCGTGGGGCAAGTCTCCGCGGCCGCCCGCCGCAGCAGCGCCGCCG  400

seq1  CCCGGGCGCGCAAGGCCGTCGTCGTCGTCCAGGGGTTGCTCGCCGCCCGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGGCGCGCAAGGCCGTCGTCGTCGTCCAGGGGTTGCTCGCCGCCCGC  450

seq1  GGCCCCAGCGCGCTGCTCGTCGTCATATTCTTCGTCGTAGTAGTCGTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCAGCGCGCTGCTCGTCGTCATATTCTTCGTCGTAGTAGTCGTCCA  500

seq1  GGCCCCCGTCCGAGCCGCTGCTGCCCGGACCGTTGCTCGCATCTGGGCCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCCGTCCGAGCCGCTGCTGCCCGGACCGTTGCTCGCATCTGGGCCG  550

seq1  AAGCACAGGCGGGCCATGTTCTC-TTTGACCGATTCGCAGATGGGCCGCT  599
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAGCACAGGCGGGCCATGTTCTCTTTTGACCGATTCGCAGATGGGCCGCT  600

seq1  CCAGCCCATCGCACACGCAGTCGTTGAGCAGCGCCGCCTTGGGCACGGCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCATCGCACACGCAGTCGTTGAGCAGCGCCGCCTTGGGCACGGCC  650

seq1  AGCATGTCCTCGATGACCGCGCGGCACTCGTCTGTGCAGCGCAGCCCGTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGTCCTCGATGACCGCGCGGCACTCGTCTGTGCAGCGCAGCCCGTT  700

seq1  GAAAAGCTTGCCGCAGTAGGCCAGGTAGCGGCTGAGCGCCAGGTTGCAGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCTTGCCGCAGTAGGCCAGGTAGCGGCTGAGCGCCAGGTTGCAGC  750

seq1  GGCTGTCCCGGTCGCAGCGCCGCCGGGCCTCAGTGCAGCCCATGACCGAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTCCCGGTCGCAGCGCCGCCGGGCCTCAGTGCAGCCCATGACCGAG  800

seq1  CCCGC-TCCCGCGCCCGGGCCCACGCTGCTGGTGCGCGGCAGACAGGGCT  848
      | ||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCTTCCCGCGCCCGGGCCCACGCTGCTGGTGCGCGGCAGACAGGGCT  850

seq1  CGATGGCGCGCTTGGTGGACCTGCAGTGTTCGTCC-TGCGCGCAGTCGCA  897
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CGATGGCGCGCTTGGTGGACCTGCAGTGTTCGTCCTTGCGCGCAGTCGCA  900

seq1  GTCCTCCAGCGCGGGCCCGCGGCGCGTG-TGGTTGAGCT-GGATAAG-CG  944
      |||||||||||||||||||||||||||| |||||||||| |||| || ||
seq2  GTCCTCCAGCGCGGGCCCGCGGCGCGTGTTGGTTGAGCTGGGATTAGCCG  950

seq1  CCGAGATGCAGTGGCTCGGGCAGCGCCAGCGCGGCGAGGACGCGGC  990
       |||||||||  ||||| |||||||||||| || | ||||||||||
seq2  TCGAGATGCATGGGCTCTGGCAGCGCCAGCCCGCCAAGGACGCGGC  996