BAC Information

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BAC

Clone NameB6Ng01-148G06
Chromosome13 (Build37)
Map Location 102,084,445 - 102,214,017
singlet/doubletdoublet
Overlap geneLOC100039971, LOC100039983
Upstream geneBirc1f, EG667838, Naip1, Gtf2h2, Ocln, LOC667861, Marveld2, Rad17, Taf9, Ccdc125, Cdk7, Mrps36, Cenph, Ccnb1, Slc30a5, LOC619865, LOC619917, EG619937, 4933416M06Rik
Downstream genePik3r1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148G06.bB6Ng01-148G06.g
ACCDH945016DH945017
length1,0991,135
definitionDH945016|Mus musculus domesticus DNA, BAC clone: B6Ng01-148G06, 5' end.DH945017|Mus musculus domesticus DNA, BAC clone: B6Ng01-148G06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,084,445 - 102,085,563)(102,212,859 - 102,214,017)
sequence
gaattcaggctgcagaaagacatgaaaggaaaagaaaaaaaaaaaaacat
ctgcctttaacctgtagggttagctcccttatgctgtcagttggtagaca
ttccttgtcaggagagacacctgctccatcctggtaactttagtacccta
tagatatttggaggaaagactagaattagttaaaccatgatttcactttt
aggtatgtgcattaattgtatggcagagggtttttttgtttgtttgtttg
tttgtttgtttcttaaatttgattaatttacatgtaaacacagatcaagt
cagagcctatcaggttcatgaaggttgccacacatacctagaccaactga
aggaatagtaacagaaactcacagatggaccagacctttcaggacagaga
ggatgcaactagaagctggaggtgtgttttataatgtgtttcaatggtac
ttacccaacctgagaaaactcttaaacagagatctgttagccttgccttt
gatggtttgtagctaacattaaagtcaggggacggccctgtactactggc
tttttccaagtgaggatcactaagcaagagttgctgccctttaaatatta
tttacccaaatatgacctggcttttcagggaaaatgcacaaagggaaata
aaaatgtctattttcttaagagccccttaaagcttgctgatgaagctctg
tcagggatttttagcaaagctcttttgcaggagtttaaaatatgctcata
aaaattaactgcacgcttcttatgcaagttaaaaacagaatttgtgtggt
tcttttaaaatcgtctaggtctttaaaggaggcatatgaagacacagcct
cgtcacgctttccctgtggctgcacagcctgtttgtttaaagacccatta
aggctttgcagctcatcttacccttcccctagtcccagagcacaaagtat
ttccggttttgttcaagtgatcaaggaaaatgcagctgttcctttttatt
tgcctaccccgttgaaacgaattaagtcaggaagattagatagctcctga
tgcgagcctaaatttctgctcagacctctacgaatgatgcttcattaat
gaattcagtcatgaaatgtgagatttagtgtacattttctgaggtgggtt
ttattgtgcctccacccactctctttgtatttacatagctggaaactgta
aatcagcatggagaccttatttgcaaatcagcattttcctgaagttccgg
ggggtaaagatggcactgctaaactccacgatgatctatgtgttgagtct
gttaactttgggagtcacacaatggctgaactgtcattgtcatggaactg
tattgctctcccttgccacagcgtgagatacttgagccatgctcagcaat
gtcgctctggtctaaaccacagggaggaccactgagctgttctgctcact
gacgggctgagtataatcctggcattgcagaggggactttgagagtccac
agctagagctctaattaaactcaaggatcaggtctgaacctctttccagt
catcgcccaagtgtgagcaaagattccagtctctttattagtatcccaaa
ccaatagttggcatctgacacattcatcatttctgatggcctagaccagt
ggttctcaatcatcttaatgcaatgaccctttaatatagtcacacctcat
gatgtagtgaccctcaactataaaattattattgttgctattacataact
gtaattttgctactgttatgaatcataacataaatatctttgttttctga
tggccttaggcaacccctgtgaagggggtgctcgaccccacaaagggatg
gtgacccacaagttaagaagcactaacctagaaaatgtactggggctctc
aatattgcctatgtgtaagcttgggaaaatcttgtgcggaaaaagactac
ttgagattagtgtctgaaacctacaatgacctgcagagaaaggagtctcc
agcagcatcacacagggctcctgagaacatcagccacctctccctgacag
cctagccattctttcagaagtatatattcttctcatcagatgtgtgagct
gctagagactggaaaacaattccaaactcctcttccactgggattaaatt
atattcctaggatatggagtatgaggttattgagggctgttttgttctgc
tgggcgacatttatttggaagaaatgactatgaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_102084445_102085563
seq2: B6Ng01-148G06.b_45_1143

seq1  GAATTCAGGCTGCAGAAAGACATGAAAGGAAAAGAAAAAAAAAAAAACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCTGCAGAAAGACATGAAAGGAAAAGAAAAAAAAAAAAACAT  50

seq1  CTGCCTTTAACCTGTAGGGTTAGCTCCCTTATGCTGTCAGTTGGTAGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTTAACCTGTAGGGTTAGCTCCCTTATGCTGTCAGTTGGTAGACA  100

seq1  TTCCTTGTCAGGAGAGACACCTGCTCCATCCTGGTAACTTTAGTACCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGTCAGGAGAGACACCTGCTCCATCCTGGTAACTTTAGTACCCTA  150

seq1  TAGATATTTGGAGGAAAGACTAGAATTAGTTAAACCATGATTTCACTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATTTGGAGGAAAGACTAGAATTAGTTAAACCATGATTTCACTTTT  200

seq1  AGGTATGTGCATTAATTGTATGGCAGAGGGTTTTTTTGTTTGTTTGTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATGTGCATTAATTGTATGGCAGAGGGTTTTTTTGTTTGTTTGTTTG  250

seq1  TTTGTTTGTTTCTTAAATTTGATTAATTTACATGTAAACACAGATCAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTCTTAAATTTGATTAATTTACATGTAAACACAGATCAAGT  300

seq1  CAGAGCCTATCAGGTTCATGAAGGTTGCCACACATACCTAGACCAACTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCCTATCAGGTTCATGAAGGTTGCCACACATACCTAGACCAACTGA  350

seq1  AGGAATAGTAACAGAAACTCACAGATGGACCAGACCTTTCAGGACAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATAGTAACAGAAACTCACAGATGGACCAGACCTTTCAGGACAGAGA  400

seq1  GGATGCAACTAGAAGCTGGAGGTGTGTTTTATAATGTGTTTCAATGGTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCAACTAGAAGCTGGAGGTGTGTTTTATAATGTGTTTCAATGGTAC  450

seq1  TTACCCAACCTGAGAAAACTCTTAAACAGAGATCTGTTAGCCTTGCCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCAACCTGAGAAAACTCTTAAACAGAGATCTGTTAGCCTTGCCTTT  500

seq1  GATGGTTTGTAGCTAACATTAAAGTCAGGGGACGGCCCTGTACTACTGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTTGTAGCTAACATTAAAGTCAGGGGACGGCCCTGTACTACTGGC  550

seq1  TTTTTCCAAGTGAGGATCACTAAGCAAGAGTTGCTGCCCTTTAAATATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCAAGTGAGGATCACTAAGCAAGAGTTGCTGCCCTTTAAATATTA  600

seq1  TTTACCCAAATATGACCTGGCTTTTCAGGGAAAATGCACAAAGGGAAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCCAAATATGACCTGGCTTTTCAGGGAAAATGCACAAAGGGAAATA  650

seq1  AAAATGTCTATTTTCTTAAGAGCCCCTTAAAGCTTGCTGATGAAGCTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTCTATTTTCTTAAGAGCCCCTTAAAGCTTGCTGATGAAGCTCTG  700

seq1  TCAGGGATTTTTAGCAAAGCTCTTTTGCAGGAGTTTAAAATATGCTCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGATTTTTAGCAAAGCTCTTTTGCAGGAGTTTAAAATATGCTCATA  750

seq1  AAAATTAACTGCAGGCTTCTTATGCAAGTTAAAAACAGAATTTGTGTGGT  800
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAAATTAACTGCACGCTTCTTATGCAAGTTAAAAACAGAATTTGTGTGGT  800

seq1  TCTTTTAAAATCGTCTAGGTCTTTAAAGGAGGCATAATGAAGACACAGCC  850
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCTTTTAAAATCGTCTAGGTCTTTAAAGGAGGCAT-ATGAAGACACAGCC  849

seq1  TCGTCAACGCTTTCCCTGTGGCTGCACAGCCTGTTTGTTTAAGGACCCAT  900
      ||||| |||||||||||||||||||||||||||||||||||| |||||||
seq2  TCGTC-ACGCTTTCCCTGTGGCTGCACAGCCTGTTTGTTTAAAGACCCAT  898

seq1  TAAGGCTTTGCAGCTCATCTTACCCTTCCCCTAGTCCCAGAAGCACAAAG  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TAAGGCTTTGCAGCTCATCTTACCCTTCCCCTAGTCCCAG-AGCACAAAG  947

seq1  TATTTCCGGTTTTGTTCAGAGTGATCAAGGAAAATGCCAGCTGTTCCTTT  1000
      |||||||||||||||||| ||||||||||||||||| |||||||||||||
seq2  TATTTCCGGTTTTGTTCA-AGTGATCAAGGAAAATG-CAGCTGTTCCTTT  995

seq1  TTTATTTTGCCTTACCCCCGTTGAAACGGAATTAAAGTTCAGGAAAGGTA  1050
      ||   |||||||   |||||||||||| |||||||   |||||||    |
seq2  TT--ATTTGCCT--ACCCCGTTGAAAC-GAATTAA--GTCAGGAA---GA  1035

seq1  TAAGATAGCTTCATGATGCAGAGCCTAAAATTCCTGCTCAGATCTCTACG  1100
      | ||||||| || |||||| |||||| ||||| ||||||||| |||||||
seq2  TTAGATAGC-TCCTGATGC-GAGCCT-AAATTTCTGCTCAGACCTCTACG  1082

seq1  AAATTGATGCTTCAATAAT  1119
      ||  |||||||||| ||||
seq2  AA--TGATGCTTCATTAAT  1099

seq1: chr13_102212859_102214017
seq2: B6Ng01-148G06.g_67_1201 (reverse)

seq1  ATTCATTAGTCATTTTTTCTTCTCAAATTAAAATGTCCCCACAAGCAGGA  50
      ||||| ||||||||| |||    |||||  ||||||| |  | |||| ||
seq2  ATTCA-TAGTCATTTCTTC----CAAAT--AAATGTCGC--CCAGCA-GA  40

seq1  ACAAAACAGGCCCTCAATAACCTCATAACTCATTATTTCCTAGGAATATA  100
      |||||||| ||||||||||||||||| ||||   || |||||||||||||
seq2  ACAAAACA-GCCCTCAATAACCTCAT-ACTC--CATATCCTAGGAATATA  86

seq1  TTTAATTCCCAGTGG-AGAGGAGTTTGGAATTGTTTTCCAGTTCTCTAAG  149
       || | ||||||||| ||||||||||||||||||||||||| ||||| ||
seq2  ATTTAATCCCAGTGGAAGAGGAGTTTGGAATTGTTTTCCAG-TCTCT-AG  134

seq1  CAGCCTCACACATTCTGATGAAGGAGGATATATACTTTCTGAAGGATTGG  199
      ||| |||||||| ||||||| || || |||||||| ||||||| || |||
seq2  CAG-CTCACACA-TCTGATG-AGAAGAATATATAC-TTCTGAAAGAATGG  180

seq1  CTAGGGCTGTCAGGGAGAGGTGGCTGATGTTCTCAGGAGCCCTGTGTGAT  249
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTA-GGCTGTCAGGGAGAGGTGGCTGATGTTCTCAGGAGCCCTGTGTGAT  229

seq1  GCTGCTGGAGACCTCCTTTTCTCTTGCAGGTCATTGTAGGTTTTCAGACA  299
      ||||||||||| |||| |||||| |||||||||||||||| |||||||||
seq2  GCTGCTGGAGA-CTCC-TTTCTC-TGCAGGTCATTGTAGG-TTTCAGACA  275

seq1  CTAATCTCAAGTAGTCTTTTTCCGCACAAGATTTTCCCAAGCTTACACAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCTCAAGTAGTCTTTTTCCGCACAAGATTTTCCCAAGCTTACACAT  325

seq1  AGGCAATATTGAGAGCCCCAGTACATTTTCTAGGTTAGTGCTTCTTAACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAATATTGAGAGCCCCAGTACATTTTCTAGGTTAGTGCTTCTTAACT  375

seq1  TGTGGGTCACCATCCCTTTGTGGGGTCGAGCACCCCCTTCACAGGGGTTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGTCACCATCCCTTTGTGGGGTCGAGCACCCCCTTCACAGGGGTTG  425

seq1  CCTAAGGCCATCAGAAAACAAAGATATTTATGTTATGATTCATAACAGTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGGCCATCAGAAAACAAAGATATTTATGTTATGATTCATAACAGTA  475

seq1  GCAAAATTACAGTTATGTAATAGCAACAATAATAATTTTATAGTTGAGGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATTACAGTTATGTAATAGCAACAATAATAATTTTATAGTTGAGGG  525

seq1  TCACTACATCATGAGGTGTGACTATATTAAAGGGTCATTGCATTAAGATG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTACATCATGAGGTGTGACTATATTAAAGGGTCATTGCATTAAGATG  575

seq1  ATTGAGAACCACTGGTCTAGGCCATCAGAAATGATGAATGTGTCAGATGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGAACCACTGGTCTAGGCCATCAGAAATGATGAATGTGTCAGATGC  625

seq1  CAACTATTGGTTTGGGATACTAATAAAGAGACTGGAATCTTTGCTCACAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTATTGGTTTGGGATACTAATAAAGAGACTGGAATCTTTGCTCACAC  675

seq1  TTGGGCGATGACTGGAAAGAGGTTCAGACCTGATCCTTGAGTTTAATTAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCGATGACTGGAAAGAGGTTCAGACCTGATCCTTGAGTTTAATTAG  725

seq1  AGCTCTAGCTGTGGACTCTCAAAGTCCCCTCTGCAATGCCAGGATTATAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTAGCTGTGGACTCTCAAAGTCCCCTCTGCAATGCCAGGATTATAC  775

seq1  TCAGCCCGTCAGTGAGCAGAACAGCTCAGTGGTCCTCCCTGTGGTTTAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCCGTCAGTGAGCAGAACAGCTCAGTGGTCCTCCCTGTGGTTTAGA  825

seq1  CCAGAGCGACATTGCTGAGCATGGCTCAAGTATCTCACGCTGTGGCAAGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCGACATTGCTGAGCATGGCTCAAGTATCTCACGCTGTGGCAAGG  875

seq1  GAGAGCAATACAGTTCCATGACAATGACAGTTCAGCCATTGTGTGACTCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCAATACAGTTCCATGACAATGACAGTTCAGCCATTGTGTGACTCC  925

seq1  CAAAGTTAACAGACTCAACACATAGATCATCGTGGAGTTTAGCAGTGCCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTAACAGACTCAACACATAGATCATCGTGGAGTTTAGCAGTGCCA  975

seq1  TCTTTACCCCCCGGAACTTCAGGAAAATGCTGATTTGCAAATAAGGTCTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACCCCCCGGAACTTCAGGAAAATGCTGATTTGCAAATAAGGTCTC  1025

seq1  CATGCTGATTTACAGTTTCCAGCTATGTAAATACAAAGAGAGTGGGTGGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGATTTACAGTTTCCAGCTATGTAAATACAAAGAGAGTGGGTGGA  1075

seq1  GGCACAATAAAACCCACCTCAGAAAATGTACACTAAATCTCACATTTCAT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAATAAAACCCACCTCAGAAAATGTACACTAAATCTCACATTTCAT  1125

seq1  GACTGAATTC  1159
      ||||||||||
seq2  GACTGAATTC  1135