BAC Information

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BAC

Clone NameB6Ng01-148J16
Chromosome13 (Build37)
Map Location 95,494,866 - 95,594,708
singlet/doubletdoublet
Overlap geneTbca
Upstream geneDmgdh, Arsb, Cycs-ps3, Lhfpl2, Scamp1, LOC435378, ENSMUSG00000042857, Ap3b1
Downstream geneOtp, Wdr41, Pde8b, Zbed3, Aggf1, Crhbp, S100z, F2rl1, F2r, Iqgap2, F2rl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148J16.bB6Ng01-148J16.g
ACCDH945161DH945162
length3261,114
definitionDH945161|Mus musculus domesticus DNA, BAC clone: B6Ng01-148J16, 5' end.DH945162|Mus musculus domesticus DNA, BAC clone: B6Ng01-148J16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,494,866 - 95,495,191)(95,593,588 - 95,594,708)
sequence
gaattctccatgtgcttcttaaacgatgaggtcttgctgtgtaggccagg
ttggccttgaactcagaatcctcttaccttagcttcctcagtgtgatttt
tataggcgttaccatgtccagctgataagaataattttaagcttaatttg
ttaattaatgcctgaaatctagggccccacacatgttggcaggtctacat
gcaaaccctgttcgattcattcgtcactgtcttcttcttcttcttcttct
tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc
ttttctcctcctcctcctcctccacc
gaattcattagttaggctagttgtatatcaaggatccacctttctccatg
ccctcagattacaagcaaggacttggcatttctcagtggtttctggggtt
tgaactcaagtcctcatggaaagcactttactgtcccagctctctcccta
gaactacagtctcttgtcatctgcactggcataaagcaaccccagctgtt
tggtgagggtcaacagctcctctttacagtgaggcagtgtgatagtgcat
cctacaaacatgacagaaattggtgttgccactacagatgaactttaatg
tgattctcaaagccttgagcatacaacaacaaacccatgtttcggtgtgc
tccttagaactcatgccttagtttcttgataagagaaaccaatcttggtt
atgatccccaggaagtcacatctctcaaattaagtcagtcctagtgtcct
tacctagtgtcctgttgatagaacagatctgtcctgtgtgtcatgtgcca
aaaggtctgtggggtcatgagaaaactaattttaaaggacaggccagtct
agatatcaggtaactcctagtcctagttgatgtcactgaagtctttctaa
gaactctacctgcagatttatgataagataattaatgatctttacatctt
aagccatgtaaatttcttgtcttcttgtcacttaagctaacaacatctgt
actgacacaccattcagttactccacaggacaaagattatgttcttgttt
tctgctcggatggaaagatgtcctgaggctcgcaagcccaggaaccacac
agctcttgaggtgggacagtgagtgtcccagtggaaggactgagacgcaa
gagctcatgaaccacgaagctctgagaggaagccactcagcagacgcact
gcaatccccagaggagggtatccatagctgagctgagagctgaggaccct
atggcttcttctgatgagaggagtcacaccaggcagaaacttcactatga
tttattgaaaggtccaaggttgtgacggatgaatccaggcatggttgccc
tctgctctgggagctgatgcagggaatggataaaaggacaggctaatagg
attctggtgggtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_95494866_95495191
seq2: B6Ng01-148J16.b_40_365

seq1  GAATTCTCCATGTGCTTCTTAAACGATGAGGTCTTGCTGTGTAGGCCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATGTGCTTCTTAAACGATGAGGTCTTGCTGTGTAGGCCAGG  50

seq1  TTGGCCTTGAACTCAGAATCCTCTTACCTTAGCTTCCTCAGTGTGATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCTTGAACTCAGAATCCTCTTACCTTAGCTTCCTCAGTGTGATTTT  100

seq1  TATAGGCGTTACCATGTCCAGCTGATAAGAATAATTTTAAGCTTAATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGCGTTACCATGTCCAGCTGATAAGAATAATTTTAAGCTTAATTTG  150

seq1  TTAATTAATGCCTGAAATCTAGGGCCCCACACATGTTGGCAGGTCTACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAATGCCTGAAATCTAGGGCCCCACACATGTTGGCAGGTCTACAT  200

seq1  GCAAACCCTGTTCGATTCATTCGTCACTGTCTTCTTCTTCTTCTTCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACCCTGTTCGATTCATTCGTCACTGTCTTCTTCTTCTTCTTCTTCT  250

seq1  TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC  300

seq1  TTTTCTCCTCCTCCTCCTCCTCCTCC  326
      ||||||||||||||||||||||| ||
seq2  TTTTCTCCTCCTCCTCCTCCTCCACC  326

seq1: chr13_95593588_95594708
seq2: B6Ng01-148J16.g_70_1183 (reverse)

seq1  GCACCCACCAAGAAATCCTATATAAGCACTGTCCTTTATACAATTCCCTG  50
      ||||||||||   |||||  ||| ||| |||||||||   | ||||||||
seq2  GCACCCACCA--GAATCC--TATTAGC-CTGTCCTTTTATCCATTCCCTG  45

seq1  CCATCAGCTCCCAAGAGCAGAGGGCAACCATGCCTGGATTCATCCCTTCA  100
       ||||||||||| |||||||||||||||||||||||||||||| || |||
seq2  -CATCAGCTCCC-AGAGCAGAGGGCAACCATGCCTGGATTCAT-CCGTCA  92

seq1  C-ACCCTGGACCTTTCAATAAATC-TAGTGAAGTTTTCTGCCTGGTGTGA  148
      | ||| |||||||||||||||||| |||||||| ||||||||||||||||
seq2  CAACCTTGGACCTTTCAATAAATCATAGTGAAG-TTTCTGCCTGGTGTGA  141

seq1  CTCTTCTCATCAGAAGAAGCCATAGGGTCCTCAGCTTCTCAGCTCAGCTA  198
      ||| ||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CTCCTCTCATCAGAAGAAGCCATAGGGTCCTCAGC-TCTCAGCTCAGCTA  190

seq1  TGGATACCCTCCTCTGGGGATTGCAGTGCGTCTGCTGAGTGGCTTCCTCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATACCCTCCTCTGGGGATTGCAGTGCGTCTGCTGAGTGGCTTCCTCT  240

seq1  CAGAGCTTCGTGGTTCCTGAGCTCCTGCGTCTCAGTCCTTCCACTGGGAC  298
      |||||||||||||||| ||||||| |||||||||||||||||||||||||
seq2  CAGAGCTTCGTGGTTCATGAGCTCTTGCGTCTCAGTCCTTCCACTGGGAC  290

seq1  ACTCACTGTCCCACCTCAAGAGCTGTGTGGTTCCTGGGCTTGCGAGCCTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTGTCCCACCTCAAGAGCTGTGTGGTTCCTGGGCTTGCGAGCCTC  340

seq1  AGGACATCTTTCCATCCGAGCAG-AAACAAGAACATAATCTTTGTCCTGT  397
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGGACATCTTTCCATCCGAGCAGAAAACAAGAACATAATCTTTGTCCTGT  390

seq1  GGAGTAACTGAATGGTGTGTCAGTACAGATGTTGTTAGCTTAAGTGACAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTAACTGAATGGTGTGTCAGTACAGATGTTGTTAGCTTAAGTGACAA  440

seq1  GAAGACAAGAAATTTACATGGCTTAAGATGTAAAGATCATTAATTATCTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAAGAAATTTACATGGCTTAAGATGTAAAGATCATTAATTATCTT  490

seq1  ATCATAAATCTGCAGGTAGAGTTCTTAGAAAGACTTCAGTGACATCAACT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAAATCTGCAGGTAGAGTTCTTAGAAAGACTTCAGTGACATCAACT  540

seq1  AGGACTAGGAGTTACCTGATATCTAGACTGGCCTGTCCTTTAAAATTAGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTAGGAGTTACCTGATATCTAGACTGGCCTGTCCTTTAAAATTAGT  590

seq1  TTTCTCATGACCCCACAGACCTTTTGGCACATGACACACAGGACAGATCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCATGACCCCACAGACCTTTTGGCACATGACACACAGGACAGATCT  640

seq1  GTTCTATCAACAGGACACTAGGTAAGGACACTAGGACTGACTTAATTTGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATCAACAGGACACTAGGTAAGGACACTAGGACTGACTTAATTTGA  690

seq1  GAGATGTGACTTCCTGGGGATCATAACCAAGATTGGTTTCTCTTATCAAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGTGACTTCCTGGGGATCATAACCAAGATTGGTTTCTCTTATCAAG  740

seq1  AAACTAAGGCATGAGTTCTAAGGAGCACACCGAAACATGGGTTTGTTGTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAGGCATGAGTTCTAAGGAGCACACCGAAACATGGGTTTGTTGTT  790

seq1  GTATGCTCAAGGCTTTGAGAATCACATTAAAGTTCATCTGTAGTGGCAAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCTCAAGGCTTTGAGAATCACATTAAAGTTCATCTGTAGTGGCAAC  840

seq1  ACCAATTTCTGTCATGTTTGTAGGATGCACTATCACACTGCCTCACTGTA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATTTCTGTCATGTTTGTAGGATGCACTATCACACTGCCTCACTGTA  890

seq1  AAGAGGAGCTGTTGACCCTCACCAAACAGCTGGGGTTGCTTTATGCCAGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAGCTGTTGACCCTCACCAAACAGCTGGGGTTGCTTTATGCCAGT  940

seq1  GCAGATGACAAGAGACTGTAGTTCTAGGGAGAGAGCTGGGACAGTAAAGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGACAAGAGACTGTAGTTCTAGGGAGAGAGCTGGGACAGTAAAGT  990

seq1  GCTTTCCATGAGGACTTGAGTTCAAACCCCAGAAACCACTGAGAAATGCC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCCATGAGGACTTGAGTTCAAACCCCAGAAACCACTGAGAAATGCC  1040

seq1  AAGTCCTTGCTTGTAATCTGAGGGCATGGAGAAAGGTGGATCCTTGATAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCTTGCTTGTAATCTGAGGGCATGGAGAAAGGTGGATCCTTGATAT  1090

seq1  ACAACTAGCCTAACTAATGAATTC  1121
      ||||||||||||||||||||||||
seq2  ACAACTAGCCTAACTAATGAATTC  1114