BAC Information

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BAC

Clone NameB6Ng01-148P15
Chromosome13 (Build37)
Map Location 12,563,613 - 12,707,646
singlet/doubletdoublet
Overlap geneEdaradd, Ero1lb, LOC664862
Upstream geneZp4, Ryr2, LOC100039678, Mtr, LOC100039826, Actn2, EG432725, Heatr1, LOC546246, Lgals8, LOC100039900
Downstream geneEG238507, LOC100039744, EG630757, Prl2c3, LOC100039999, LOC100039754, Prl2c2, LOC434483, LOC674723, Prl2c5, LOC630611, LOC100039786, LOC385049, LOC630663, LOC100040108, Gpr137b, LOC664960, Nid1, Lyst
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148P15.bB6Ng01-148P15.g
ACCDH945439DH945440
length1,155204
definitionDH945439|Mus musculus domesticus DNA, BAC clone: B6Ng01-148P15, 5' end.DH945440|Mus musculus domesticus DNA, BAC clone: B6Ng01-148P15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,706,487 - 12,707,646)(12,563,613 - 12,563,816)
sequence
gaattcactttaaaacgtatagaatgcgtggtctaatagtttaaagcttt
gggaaaactttccacaaatcttacctctgaaggttcctcttgtgagtgcc
acgtggtgggctcctttcaccgccactcaagcattccaagttaaggggaa
gcagagtaccacggtctgtacgtaacaggctcagcagcagcaatttctcg
taaactctgtcctaagcctggtccttcttcatctgaaagcactactacaa
gcactccagtaacaagtggatactgttaagatgtagttgctgacactatt
aaacctcctctgctgtgtgtgtagccattttgtagagttttcttcagccc
ggtgtaactgaatactcactacctcagtaggatggaaggactgcgccttc
tttgactcagccagtgctctctatagtcaggctacaagccaagaggtccc
cacagagtattaacaataaacacttctggccttcaagctctaaaggattg
cagactcctgacagcttttctgtaagacatgcctgtcatttgtatgaggc
tgacacggtgctcactcgctgcctgttatttttagatagtgttctattaa
aagctacgtgtatgagaaagtgggctctgcctctgtggcagcaccatccc
tctctcagccagagagcgttccagacagtggtcctcatgtgccatctccg
tgctgtcctgggaaaactctggaaccaatgtggccctcctggaggccgga
tgctctggcttcttctggtcctataggtcacagagccacgcccactttct
cccatttgtatatttaagattgggagcccagtttccagtgggttgtgata
gggtcttcattgtacagagcacgacgtggaggaacttacgcaacccctcc
cccacaccttgcctttggggtggagtaaaacatctgggttgcaagccatt
aaaattgcttctttgccagggtgaattctggcaaagcctacacaaatcgc
ctgtacgatagccactgtaaaaaagtttatctgtcaccatacctgcatga
atttgcttgttgcagcagttcccacagctcttggtgtctttgtctctagc
aggccgtacctgccagcagccagggctagcttgcttgaagacagcctcat
aaagg
aagcaggtaacaacttgtttggttttgattctgggtggctcgagcagtcg
cgtgcgtgaaagatgagatgtggagcgaagtgaattgaaaggggcagttt
ccaacacagagcagctagatacactgcgtggagagatgtggggatcctag
tgactctaggcaaacatgggcatccgtgtgtgtgtgtgtgtgtgtgtgtg
tgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_12706487_12707646
seq2: B6Ng01-148P15.b_47_1201 (reverse)

seq1  CCTTAATGAGGCTGTGCTTTCCAGCAAGCCTTGCCCTTGGCTGCTGGCAG  50
      |||| ||||||||||   ||| |||||| || |||| |||||||||||||
seq2  CCTTTATGAGGCTGT--CTTCAAGCAAG-CTAGCCC-TGGCTGCTGGCAG  46

seq1  GTACCGCCCTGCTAGAGACAAGGACA-CAGGAGCTGTGGGCACTGGCTGC  99
      ||| || |||||||||||||| |||| || |||||||||| ||| |||||
seq2  GTA-CGGCCTGCTAGAGACAAAGACACCAAGAGCTGTGGGAACT-GCTGC  94

seq1  AACAGCCAAATCATTGCAGGTATGGTGACAGATAAACTTTTATACAGT-G  148
      ||||  |||||   ||||||||||||||||||||||||||| |||||| |
seq2  AACAAGCAAATTCATGCAGGTATGGTGACAGATAAACTTTTTTACAGTGG  144

seq1  CTATCGTACAGGCGATTTGTGTAGGCTTTGCCAGAATTCACCCTGGCAAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCGTACAGGCGATTTGTGTAGGCTTTGCCAGAATTCACCCTGGCAAA  194

seq1  GAAGCAATTTTAAATGGCTTGCAACCCAGATG-TTTACTCCACCCCAAAG  247
      ||||||||||| |||||||||||||||||||| |||||||||||||||||
seq2  GAAGCAATTTT-AATGGCTTGCAACCCAGATGTTTTACTCCACCCCAAAG  243

seq1  GCAGGGTGT-GGGGAGGGGTTGCGTAAGTTCCTCCACGTCGTGCTCTGTA  296
      ||| ||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGTGTGGGGGAGGGGTTGCGTAAGTTCCTCCACGTCGTGCTCTGTA  293

seq1  CAATGAAGACCCTATCACAACCCACTGGAAACTGGGCTCCCAATCTTAAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAAGACCCTATCACAACCCACTGGAAACTGGGCTCCCAATCTTAAA  343

seq1  TATAACAAAATGGGAGAAAGTGGGCGTGGCTCTGTGACCTATAGGACCAG  396
      ||||   |||||||||||||||||||||||||||||||||||||||||||
seq2  TATA--CAAATGGGAGAAAGTGGGCGTGGCTCTGTGACCTATAGGACCAG  391

seq1  AAGAAGCCAGAGCATCCGGCCTCCAGGAGGGCCACATTGGTTCCAGAGTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCCAGAGCATCCGGCCTCCAGGAGGGCCACATTGGTTCCAGAGTT  441

seq1  TTCCCAGGACAGCACGGAGATGGCACATGAGGACCACTGTCTGGAACGCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGGACAGCACGGAGATGGCACATGAGGACCACTGTCTGGAACGCT  491

seq1  CTCTGGCTGAGAGAGGGATGGTGCTGCCACAGAGGCAGAGCCCACTTTCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCTGAGAGAGGGATGGTGCTGCCACAGAGGCAGAGCCCACTTTCT  541

seq1  CATACACGTAGCTTTTAATAGAACACTATCTAAAAATAACAGGCAGCGAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACGTAGCTTTTAATAGAACACTATCTAAAAATAACAGGCAGCGAG  591

seq1  TGAGCACCGTGTCAGCCTCATACAAATGACAGGCATGTCTTACAGAAAAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCACCGTGTCAGCCTCATACAAATGACAGGCATGTCTTACAGAAAAG  641

seq1  CTGTCAGGAGTCTGCAATCCTTTAGAGCTTGAAGGCCAGAAGTGTTTATT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGGAGTCTGCAATCCTTTAGAGCTTGAAGGCCAGAAGTGTTTATT  691

seq1  GTTAATACTCTGTGGGGACCTCTTGGCTTGTAGCCTGACTATAGAGAGCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATACTCTGTGGGGACCTCTTGGCTTGTAGCCTGACTATAGAGAGCA  741

seq1  CTGGCTGAGTCAAAGAAGGCGCAGTCCTTCCATCCTACTGAGGTAGTGAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGAGTCAAAGAAGGCGCAGTCCTTCCATCCTACTGAGGTAGTGAG  791

seq1  TATTCAGTTACACCGGGCTGAAGAAAACTCTACAAAATGGCTACACACAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGTTACACCGGGCTGAAGAAAACTCTACAAAATGGCTACACACAC  841

seq1  AGCAGAGGAGGTTTAATAGTGTCAGCAACTACATCTTAACAGTATCCACT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGGAGGTTTAATAGTGTCAGCAACTACATCTTAACAGTATCCACT  891

seq1  TGTTACTGGAGTGCTTGTAGTAGTGCTTTCAGATGAAGAAGGACCAGGCT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACTGGAGTGCTTGTAGTAGTGCTTTCAGATGAAGAAGGACCAGGCT  941

seq1  TAGGACAGAGTTTACGAGAAATTGCTGCTGCTGAGCCTGTTACGTACAGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACAGAGTTTACGAGAAATTGCTGCTGCTGAGCCTGTTACGTACAGA  991

seq1  CCGTGGTACTCTGCTTCCCCTTAACTTGGAATGCTTGAGTGGCGGTGAAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGGTACTCTGCTTCCCCTTAACTTGGAATGCTTGAGTGGCGGTGAAA  1041

seq1  GGAGCCCACCACGTGGCACTCACAAGAGGAACCTTCAGAGGTAAGATTTG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCCACCACGTGGCACTCACAAGAGGAACCTTCAGAGGTAAGATTTG  1091

seq1  TGGAAAGTTTTCCCAAAGCTTTAAACTATTAGACCACGCATTCTATACGT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGTTTTCCCAAAGCTTTAAACTATTAGACCACGCATTCTATACGT  1141

seq1  TTTAAAGTGAATTC  1160
      ||||||||||||||
seq2  TTTAAAGTGAATTC  1155

seq1: chr13_12563613_12563816
seq2: B6Ng01-148P15.g_74_277

seq1  AAGCAGGTAACAACTTGTTTGGTTTTGATTCTGGGTGGCTCGAGCAGTCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGTAACAACTTGTTTGGTTTTGATTCTGGGTGGCTCGAGCAGTCG  50

seq1  CGTGCGTGAAAGATGAGATGTGGAGCGAAGTGAATTGAAAGGGGCAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCGTGAAAGATGAGATGTGGAGCGAAGTGAATTGAAAGGGGCAGTTT  100

seq1  CCAACACAGAGCAGCTAGATACACTGCGTGGAGAGATGTGGGGATCCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACACAGAGCAGCTAGATACACTGCGTGGAGAGATGTGGGGATCCTAG  150

seq1  TGACTCTAGGCAAACATGGGCATCCGTGTGTGTGTGTGTGTGTGTGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTAGGCAAACATGGGCATCCGTGTGTGTGTGTGTGTGTGTGTGTG  200

seq1  TGTG  204
      ||||
seq2  TGTG  204