BAC Information

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BAC

Clone NameB6Ng01-151F03
Chromosome13 (Build37)
Map Location 80,100,934 - 80,272,327
singlet/doubletdoublet
Overlap geneLOC382780
Upstream geneLOC666925
Downstream geneEG666933, Arrdc3, LOC666964, LOC100043074, LOC218368, LOC666979, EG666984, Gpr98
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151F03.bB6Ng01-151F03.g
ACCDH947167DH947168
length1,073748
definitionDH947167|Mus musculus domesticus DNA, BAC clone: B6Ng01-151F03, 5' end.DH947168|Mus musculus domesticus DNA, BAC clone: B6Ng01-151F03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,100,934 - 80,102,007)(80,271,741 - 80,272,327)
sequence
gaattcacctaagtttgagctttcttggaatttctttgttgtacagtgtt
ttcagaaattaatcaccatctgctaggtatgttttaaaatattattttat
tttatctataagtcagccaatttattatgtggaatcatacttctctggag
actcagatttttcaaaacctactttaataagggttctcaagggtgggaag
aaaagagggtgaggatatggggatgtgaactacttagaagtagttctttg
gggtgattccaatctctgttgtcaagatacctgtagtccagttcaaattt
catcaaatgtgaatcagcagcatccacacaatccagaagaaacagtcagg
cctctgcctaattggtacaagtcagcagaaaggaaaaaggggctaaaatc
agaagttagctgcttttcctctctcagtgaagtgaagatcagcaaggatg
cgggaccaatgaagtattgcatggctaactgcacaaacacattttcattg
tctcttgagtcctacttatattctctacaaacatcacgtgtcctctcccc
atggttcagcaaaacatcatatgagtctgcatcatacgacacagccagaa
atttccatttcacttctctgtatataacaacattgatacatgatgctctt
acccagatttctatatcaggttagtacagtattcaaagtcatttcaatag
cagagtatgcaccgataattccaaactcaatagactcctgtggtgtatat
gcacttgtgtaatataattttatgccactaattcatgacatttcctaaat
gttggaactatttaattatatggagtatatcaataaatatgaagtggctg
ccacacagtagatatataacatgttatttccctcactttactgacaattc
tttgttgtgtgcattcccacttgtgtttacatttaacctgtcaactggtt
atacaaatgccaataaattgagaccttgttaagtacaaccctcggcagga
gatcaatacctttatgacattgtatcttttgtaccttcagcctcacatct
accattcaccaatgtctaccacc
gaattctcttttctaccagcatttcctgcttatataatcctagaaaggga
tcttgtaaattttgtataatttgggaacttactgatatttgtccattatt
tactttttgaccactgtaaactatatttacttctcatgtcataagtagcc
tcattctaagatgaaagatttccattcagacaaaatcaagaattagtacc
acaatctatatcatgttgtgaaatgtaacatggagagaataaccatattt
agcccaaaatattaatctataattattttcaattaataattcctaacaaa
attgttaatcataataatgttgttaaatatattttaattattattttcac
aaggaagttataaccaagaaaccttgatttgaataataaaaaatttcaca
gaagatttgtatatcttttcattcaataatataagtgaatattggatctt
ttggagattagatttctttaaaaatattttaattaattttaattatgtgt
actcatttgtgtccatgtctgagtattttcctaaagtagaggggtccata
tagctcaaaagtatcagattccctggacctgaagttacagaacattagtg
acctgccagttgtgggtattaggaatctaattcatatcctgcaaacagca
gcccacctacatagtcagttagtactatctctccagcctcatgttctatt
gtttaggatttttacaattctttattattttattgctactactactac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_80100934_80102007
seq2: B6Ng01-151F03.b_46_1118

seq1  GAATTCACCTAAGTTTGAGCTTTCTTGGAATTTCTTTGTTGTACAGTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTAAGTTTGAGCTTTCTTGGAATTTCTTTGTTGTACAGTGTT  50

seq1  TTCAGAAATTAATCACCATCTGCTAGGTATGTTTTAAAATATTATTTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAATTAATCACCATCTGCTAGGTATGTTTTAAAATATTATTTTAT  100

seq1  TTTATCTATAAGTCAGCCAATTTATTATGTGGAATCATACTTCTCTGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTATAAGTCAGCCAATTTATTATGTGGAATCATACTTCTCTGGAG  150

seq1  ACTCAGATTTTTCAAAACCTACTTTAATAAGGGTTCTCAAGGGTGGGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGATTTTTCAAAACCTACTTTAATAAGGGTTCTCAAGGGTGGGAAG  200

seq1  AAAAGAGGGTGAGGATATGGGGATGTGAACTACTTAGAAGTAGTTCTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGGGTGAGGATATGGGGATGTGAACTACTTAGAAGTAGTTCTTTG  250

seq1  GGGTGATTCCAATCTCTGTTGTCAAGATACCTGTAGTCCAGTTCAAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGATTCCAATCTCTGTTGTCAAGATACCTGTAGTCCAGTTCAAATTT  300

seq1  CATCAAATGTGAATCAGCAGCATCCACACAATCCAGAAGAAACAGTCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAATGTGAATCAGCAGCATCCACACAATCCAGAAGAAACAGTCAGG  350

seq1  CCTCTGCCTAATTGGTACAAGTCAGCAGAAAGGAAAAAGGGGCTAAAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTAATTGGTACAAGTCAGCAGAAAGGAAAAAGGGGCTAAAATC  400

seq1  AGAAGTTAGCTGCTTTTCCTCTCTCAGTGAAGTGAAGATCAGCAAGGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTAGCTGCTTTTCCTCTCTCAGTGAAGTGAAGATCAGCAAGGATG  450

seq1  CGGGACCAATGAAGTATTGCATGGCTAACTGCACAAACACATTTTCATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGACCAATGAAGTATTGCATGGCTAACTGCACAAACACATTTTCATTG  500

seq1  TCTCTTGAGTCCTACTTATATTCTCTACAAACATCACGTGTCCTCTCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGAGTCCTACTTATATTCTCTACAAACATCACGTGTCCTCTCCCC  550

seq1  ATGGTTCAGCAAAACATCATATGAGTCTGCATCATACGACACAGCCAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTCAGCAAAACATCATATGAGTCTGCATCATACGACACAGCCAGAA  600

seq1  ATTTCCATTTCACTTCTCTGTATATAACAACATTGATACATGATGCTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCATTTCACTTCTCTGTATATAACAACATTGATACATGATGCTCTT  650

seq1  ACCCAGATTTCTATATCAGGTTAGTACAGTATTCAAAGTCATTTCAATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGATTTCTATATCAGGTTAGTACAGTATTCAAAGTCATTTCAATAG  700

seq1  CAGAGTATGCACCGATAATTCCAAACTCAATAGACTCCTGTGGTGTATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTATGCACCGATAATTCCAAACTCAATAGACTCCTGTGGTGTATAT  750

seq1  GCACTTGTGTAATATAATTTTATGCCACTAATTCATGACATTTCCTAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTGTGTAATATAATTTTATGCCACTAATTCATGACATTTCCTAAAT  800

seq1  GTTGGAACTA-TTAATTATATGGAGTATATCAATAAATATGAAGTGGCTG  849
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAACTATTTAATTATATGGAGTATATCAATAAATATGAAGTGGCTG  850

seq1  CCACACAGTAGATATATAACATGTTATTTCCCTCACTTTACTGACAATTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACAGTAGATATATAACATGTTATTTCCCTCACTTTACTGACAATTC  900

seq1  TTTGTTGTGTGCATTCCCACTTGTGTTTACATTTAACCTGTCAACTGTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTTGTTGTGTGCATTCCCACTTGTGTTTACATTTAACCTGTCAACTGGTT  950

seq1  ATACAAATGCCAAATAAATTGAGACCTTGTTAAGTACAACCCTCGGCCAG  999
      ||||||||||| |||||||||||||||||||||||||||||||||| |||
seq2  ATACAAATGCC-AATAAATTGAGACCTTGTTAAGTACAACCCTCGG-CAG  998

seq1  GAGATCAAATACCTTTATGACA-TGTATCTTTTGTACCTTCAGCCTCACA  1048
      |||||| ||||||||||||||| |||||||||||||||||||||||||||
seq2  GAGATC-AATACCTTTATGACATTGTATCTTTTGTACCTTCAGCCTCACA  1047

seq1  TCTACCAATCACCAATGTCTACCACC  1074
      ||||||| ||||||||||||||||||
seq2  TCTACCATTCACCAATGTCTACCACC  1073

seq1: chr13_80271741_80272327
seq2: B6Ng01-151F03.g_66_652 (reverse)

seq1  TAACTTCAGGTCCAGGGAATCTGATACTTTTGAGCTATATGGACCCCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCAGGTCCAGGGAATCTGATACTTTTGAGCTATATGGACCCCTCT  50

seq1  ACTTTAGGAAAATACTCAGACATGGACACAAATGAGTACACATAATTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAGGAAAATACTCAGACATGGACACAAATGAGTACACATAATTAAA  100

seq1  ATTAATTAAAATATTTTTAAAGAAATCTAATCTCCAAAAGATCCAATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTAAAATATTTTTAAAGAAATCTAATCTCCAAAAGATCCAATATT  150

seq1  CACTTATATTATTGAATGAAAAGATATACAAATCTTCTGTGAAATTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTATATTATTGAATGAAAAGATATACAAATCTTCTGTGAAATTTTTT  200

seq1  ATTATTCAAATCAAGGTTTCTTGGTTATAACTTCCTTGTGAAAATAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCAAATCAAGGTTTCTTGGTTATAACTTCCTTGTGAAAATAATAA  250

seq1  TTAAAATATATTTAACAACATTATTATGATTAACAATTTTGTTAGGAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATATATTTAACAACATTATTATGATTAACAATTTTGTTAGGAATT  300

seq1  ATTAATTGAAAATAATTATAGATTAATATTTTGGGCTAAATATGGTTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTGAAAATAATTATAGATTAATATTTTGGGCTAAATATGGTTATT  350

seq1  CTCTCCATGTTACATTTCACAACATGATATAGATTGTGGTACTAATTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCATGTTACATTTCACAACATGATATAGATTGTGGTACTAATTCTT  400

seq1  GATTTTGTCTGAATGGAAATCTTTCATCTTAGAATGAGGCTACTTATGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTGTCTGAATGGAAATCTTTCATCTTAGAATGAGGCTACTTATGAC  450

seq1  ATGAGAAGTAAATATAGTTTACAGTGGTCAAAAAGTAAATAATGGACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAGTAAATATAGTTTACAGTGGTCAAAAAGTAAATAATGGACAAA  500

seq1  TATCAGTAAGTTCCCAAATTATACAAAATTTACAAGATCCCTTTCTAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTAAGTTCCCAAATTATACAAAATTTACAAGATCCCTTTCTAGGA  550

seq1  TTATATAAGCAGGAAATGCTGGTAGAAAAGAGAATTC  587
      |||||||||||||||||||||||||||||||||||||
seq2  TTATATAAGCAGGAAATGCTGGTAGAAAAGAGAATTC  587