BAC Information

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BAC

Clone NameB6Ng01-152E02
Chromosome13 (Build37)
Map Location 9,544,742 - 9,785,747
singlet/doubletdoublet
Overlap geneDip2c, LOC666986, Zmynd11
Upstream geneAdarb2, Wdr37, LOC100039632, Idi1, EG382723, LOC100039655, Idi2, Gtpbp4, LOC667721, Larp5, EG667727, LOC100039719
Downstream geneChrm3, LOC100039604
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152E02.bB6Ng01-152E02.g
ACCDH947873DH947874
length983163
definitionDH947873|Mus musculus domesticus DNA, BAC clone: B6Ng01-152E02, 5' end.DH947874|Mus musculus domesticus DNA, BAC clone: B6Ng01-152E02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,544,742 - 9,545,728)(9,785,585 - 9,785,747)
sequence
gaattcttcagtcattaggctacaggcctctctaacagcagttcttcaaa
tgaagttccctccccccgtgtatgatatgttgtgtcaagtggataataac
taaccagcacgcataaatctggaaacactgcgaggttacccagctgtcac
tgttcctattgttttacactatcagatatataggaatcactattcatccc
ctcgcggaagtgggaattctgtttaatgcaaactctgattgaatagctct
aatgatatactatgctgaaatgcatggctaatgtgaatcaaactgaacct
caggatgttcagactcagagattgctattttacaggatgccttttggatt
ttgttcattacaagttagcatgcattgtggggtgtttgtttgtttgtttg
tttgtttgttttgcagttggccatgaggtagtggagttctagagaattag
atcatttggaaacatgaatgagagcctatttggcagaagcacagatgggg
tgtgacaaggttaaatacaaagttgtagaagatgaagaggaaacttggat
gcttcccttttcctacttctcctcataggagtaactaggtggctgtcctt
cctcctgctccttcctctagtactcccatgactatttctggcaaaggcac
accttcctgacgctaggatctcagaaattgctcattaggatgtggaactg
tttatctggtggtcacagtaaaatgccatggactgtgagacttgatcagg
gagattttgatccctcagctctggggcctagaagttagagatgtgcaggt
acaagcagtgttgaggtctagtggcctctcttctagctcagagggagcca
tgtcttttgttatccccatggattacatggtcttttctccatctatgtct
gtacctcgagtcttccttctttctttaaaattcttacctagttgatgctt
gtttgttggttggttgggtatgcatgtgagaga
tacttttctctctgtgtgcccattattaggacagggaacctggaccccag
agacactccagccacttacacaggcgagacaccagttccataagtgtgat
gagcttaccaccaaagggactatttgggccaaatggcttgctgagggtgg
ggtggggtggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_9544742_9545728
seq2: B6Ng01-152E02.b_43_1025

seq1  GAATTCTTCAGTCATTAGGCTACAGGCCTCTCTAACAGCAGTTCTTCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGTCATTAGGCTACAGGCCTCTCTAACAGCAGTTCTTCAAA  50

seq1  TGAAGTTCCCTCCCCCCGTGTATGATATGTTGTGTCAAGTGGATAATAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTCCCTCCCCCCGTGTATGATATGTTGTGTCAAGTGGATAATAAC  100

seq1  TAACCAGCACGCATAAATCTGGAAACACTGCGAGGTTACCCAGCTGTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAGCACGCATAAATCTGGAAACACTGCGAGGTTACCCAGCTGTCAC  150

seq1  TGTTCCTATTGTTTTACACTATCAGATATATAGGAATCACTATTCATCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTATTGTTTTACACTATCAGATATATAGGAATCACTATTCATCCC  200

seq1  CTCGCGGAAGTGGGAATTCTGTTTAATGCAAACTCTGATTGAATAGCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCGGAAGTGGGAATTCTGTTTAATGCAAACTCTGATTGAATAGCTCT  250

seq1  AATGATATACTATGCTGAAATGCATGGCTAATGTGAATCAAACTGAACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATATACTATGCTGAAATGCATGGCTAATGTGAATCAAACTGAACCT  300

seq1  CAGGATGTTCAGACTCAGAGATTGCTATTTTACAGGATGCCTTTTGGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGTTCAGACTCAGAGATTGCTATTTTACAGGATGCCTTTTGGATT  350

seq1  TTGTTCATTACAAGTTAGCATGCATTGTGGGGTGTTTGTTTGTTTGTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCATTACAAGTTAGCATGCATTGTGGGGTGTTTGTTTGTTTGTTTG  400

seq1  TTTGTTTGTTTTGCAGTTGGCCATGAGGTAGTGGAGTTCTAGAGAATTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTTGCAGTTGGCCATGAGGTAGTGGAGTTCTAGAGAATTAG  450

seq1  ATCATTTGGAAACATGAATGAGAGCCTATTTGGCAGAAGCACAGATGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTGGAAACATGAATGAGAGCCTATTTGGCAGAAGCACAGATGGGG  500

seq1  TGTGACAAGGTTAAATACAAAGTTGTAGAAGATGAAGAGGAAACTTGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACAAGGTTAAATACAAAGTTGTAGAAGATGAAGAGGAAACTTGGAT  550

seq1  GCTTCCCTTTTCCTACTTCTCCTCATAGGAGTAACTAGGTGGCTGTCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCCTTTTCCTACTTCTCCTCATAGGAGTAACTAGGTGGCTGTCCTT  600

seq1  CCTCCTGCTCCTTCCTCTAGTACTCCCATGACTATTTCTGGCAAAGGCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGCTCCTTCCTCTAGTACTCCCATGACTATTTCTGGCAAAGGCAC  650

seq1  ACCTTCCTGACGCTAGGATCTCAGAAATTGCTCATAAGGATGTGGAACTG  700
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ACCTTCCTGACGCTAGGATCTCAGAAATTGCTCATTAGGATGTGGAACTG  700

seq1  TTTATCTGGTGGTCACAGTAAAATGCCATGGACTGTGAGACTTGATCAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTGGTGGTCACAGTAAAATGCCATGGACTGTGAGACTTGATCAGG  750

seq1  GAGA-TTTGATCCCTCAGCTCTGGGGCCTAGAAGTTAGAGATGTGCAGGT  799
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTTGATCCCTCAGCTCTGGGGCCTAGAAGTTAGAGATGTGCAGGT  800

seq1  ACAAGCAGTGTTGAGGTCTAGAGGCCTCTCTTCTAGCTCAGAGGGAGCCA  849
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACAAGCAGTGTTGAGGTCTAGTGGCCTCTCTTCTAGCTCAGAGGGAGCCA  850

seq1  TGTCTTTTGTAATCCCCATGGATTACATGGTCTTTTCTCCATCTATGTCT  899
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTTGTTATCCCCATGGATTACATGGTCTTTTCTCCATCTATGTCT  900

seq1  GTACCTCGAGTCTTCCTTCTTTCTTTAAAAATTCTTTACCTAGTTGATTG  949
      |||||||||||||||||||||||||| ||||||| |||||||||||| ||
seq2  GTACCTCGAGTCTTCCTTCTTTCTTT-AAAATTC-TTACCTAGTTGA-TG  947

seq1  CTTGTTTGTTGGTTGGTTTGGGTATGCATGTTGAGAGA  987
      |||||||||||||||| ||||||||||||| |||||||
seq2  CTTGTTTGTTGGTTGG-TTGGGTATGCATG-TGAGAGA  983

seq1: chr13_9785585_9785747
seq2: B6Ng01-152E02.g_74_236 (reverse)

seq1  CCTCCACCCCACCCCACCCTCAGCAAGCCATTTGGCCCAAATAGTCCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACCCCACCCCACCCTCAGCAAGCCATTTGGCCCAAATAGTCCCTT  50

seq1  TGGTGGTAAGCTCATCACACTTATGGAACTGGTGTCTCGCCTGTGTAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGTAAGCTCATCACACTTATGGAACTGGTGTCTCGCCTGTGTAAGT  100

seq1  GGCTGGAGTGTCTCTGGGGTCCAGGTTCCCTGTCCTAATAATGGGCACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGAGTGTCTCTGGGGTCCAGGTTCCCTGTCCTAATAATGGGCACAC  150

seq1  AGAGAGAAAAGTA  163
      |||||||||||||
seq2  AGAGAGAAAAGTA  163