BAC Information

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BAC

Clone NameB6Ng01-152G10
Chromosome13 (Build37)
Map Location 58,249,697 - 58,250,755
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040995, Spock1, Klhl3, Hnrpa0
Downstream gene5133401N09Rik, Ubqln1, LOC671252, Gkap1, Kif27, Hnrpk, Rmi1, LOC100041086, Slc28a3, LOC100041510, LOC435361, Ntrk2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152G10.bB6Ng01-152G10.g
ACCDH947983DH947984
length1,2431,055
definitionDH947983|Mus musculus domesticus DNA, BAC clone: B6Ng01-152G10, 5' end.DH947984|Mus musculus domesticus DNA, BAC clone: B6Ng01-152G10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctttctgacaagtctttttcaaacacattttcatttttatacc
ctagagcttccggtggatacagtgattctcttaagggaatttctgttcca
atggcaaggtgcgggaggcatgtcctaagttatactggtctttccaatgc
ttagagctgctatgcccacagttgctttgtctgtgctgtctacgtgtgta
actgtgcccacattcctttcctcgacaagctacactgttgagagctttcg
gtgccacttctaggaattggcatttgtcactgagctcagacaaggaagga
ggctcagataagaatatcagaaagtgaccacggggctttgttcactgctt
ggctgaattgctgtcttgtatgatctctttgctcactactttcctgtgtg
atctccttgtttacgacttcccttgatgactttgtctttgatctaagaac
tggccatgtgttttggatgcacctagaatgatataaaagcaggctgggaa
agagtgaacctgcttcagcctcagccctggctggagtcatgctataactt
tgtctagttgtttttctttttcaatcttcactctctcccttgagaccctg
ttgactgactgagctggcttggtgacttttttttttccacatatttctgc
tccccaccacacacacacacacacacacatcgtaaacctgactaaaagca
gtgagcagtagccatgccacagcctgaaggttgtgctgtcctggaattgc
ctcctccccacaacttagtccattccttgtaagcctaatctcacctgggc
tcaggacacaggcaaaaagcagccagattctttgccagagtgaaccaaga
gtatcttatagcctggttcctgtcacagcagcgctttggccccgtgccgt
ttcatgcgcacggtttttatggtctacattttcatcatcgctttggttta
caagccctgagagagggctgggctgcgctcggcatacagcactctagggc
acgcttgcacatcctcatgctgacaggttctagacttgagaaccaccccc
ctgctcggactcactggagcatggacaaacttttctaatactctttccag
tcagccacaataaatctgacagaaagctacttgaggggaagaatccattc
ctagccccggttgaggttaggtcactgccgtgagccggctctagttccat
ggaacgagcgagtgatatgagggccccgggagaatacttccag
gaattcagtgcccagaacctgtggaaaagtcaccaggaggaatggcgtca
gcttgtaatcctggtgttcggaaggcagagacaagtgggtccctagggct
tgctggccagccaggcagcctaacccgcttggcaaattccaggcacacac
acacacacacacacacacacacacacacacacactaaatgagagctggtg
agatagcttggcagttaagagcttcaagaggttctgagtttaattcccag
accatctctaaagggatctgatgccctcttctggtgtacaggtgtacatg
caggcaagagcattcattaatataattaaacaagatgcataaataaattt
aaaaataaataaataataagacgcaaagggagaacgaggagaggaaagta
agcaaatgggagtcaaaactgcagcgccaggatttatttcagggagttaa
atgcctctttcaccccatggcttaaacttcttttgagtacctccgttgaa
ttaaacttgtttccttgacttccctgacagtcccaggatcatccctgttc
gttctgtaacccactgtattctgtcagcttctccatcctccagagaagct
ggcagcagcgtagagtttggcctccctatctcccgccctccttcccaaaa
atgcgaagtcttcagaatccgggaggtagcaggaggtgccagagcctgga
gaccggattctgctcaggatcggatcgtatttaccacagctccgaagcta
tggtgcgttgtcttctccgtacctcagttccttcttgattctgtgccgga
caacacctgcttgcagaggctttttggcgactctgtaaaatcacattctg
tgtgtgtcagtgttgagactctctgaccccagaagctgttatgtcacttg
tgggtcatagtaaccatagtaccgttgtgggctgggactatgaagagtcc
ctgatgctgtaccctaaccaggccctccaccccctctgctatggcctccg
ccgtgttttctgtctttccctcgctcattctgggagtttttctatgctgt
ggttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_58249697_58250755
seq2: B6Ng01-152G10.g_68_1122 (reverse)

seq1  AAACAACAGCATAGAAAAACTCCCAGGATGGAGCCGAGGGAAAGACAGAA  50
      |||| ||||||||||||||||||||| || ||| ||||||||||||||||
seq2  AAACCACAGCATAGAAAAACTCCCAGAAT-GAG-CGAGGGAAAGACAGAA  48

seq1  AACACGGCGGAGCCCATAGCAGA-GGGGTGGAGGGCCTTGTTAGGGTACA  99
      |||||||||||| |||||||||| |||||||||||||| |||||||||||
seq2  AACACGGCGGAGGCCATAGCAGAGGGGGTGGAGGGCCTGGTTAGGGTACA  98

seq1  GCATCAGGG-CTCTTCAT-GTCCCAGCCCCACAACGGTTACTATGGTTAC  147
      ||||||||| |||||||| ||||||| |||||||||| ||||||||||||
seq2  GCATCAGGGACTCTTCATAGTCCCAG-CCCACAACGG-TACTATGGTTAC  146

seq1  TATGACCCACCAAGTGACATAACAGCTTCTGGGGTCAGAGAGTCTCAACA  197
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TATGACCCA-CAAGTGACATAACAGCTTCTGGGGTCAGAGAGTCTCAACA  195

seq1  CTGACACACACAGAATGTGATTTTTACAGAGTCGCCAAAAAGCCTCTGCA  247
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTGACACACACAGAATGTGA-TTTTACAGAGTCGCCAAAAAGCCTCTGCA  244

seq1  AGCAGGTGTTGTCCGGCACAGAATCAAGAAGGAACCTGAGGTACGGAGAA  297
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGCAGGTGTTGTCCGGCACAGAATCAAGAAGGAA-CTGAGGTACGGAGAA  293

seq1  GACAACGCACCATAGCTTCGGAGCTGTGGTAAATACGATCCGATCCTGAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACGCACCATAGCTTCGGAGCTGTGGTAAATACGATCCGATCCTGAG  343

seq1  CAGAATCCGGTCTCCAGGCTCTGGCACCTCCTGCTACCTCCCGGATTCTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATCCGGTCTCCAGGCTCTGGCACCTCCTGCTACCTCCCGGATTCTG  393

seq1  AAGACTTCGCATTTTTGGGAAGGAGGGCGGGAGATAGGGAGGCCAGACTC  447
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AAGACTTCGCATTTTTGGGAAGGAGGGCGGGAGATAGGGAGGCCAAACTC  443

seq1  TACGCTGCTGCCAGCTTCTCTGGAGGATGGAGAAGCTGACAGAATACAGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGCTGCTGCCAGCTTCTCTGGAGGATGGAGAAGCTGACAGAATACAGT  493

seq1  GGGTTACAGAACGAACAGGGATGATCCTGGGACTGTCAGGGAAGTCAAGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTACAGAACGAACAGGGATGATCCTGGGACTGTCAGGGAAGTCAAGG  543

seq1  AAACAAGTTTAATTCAACGGAGGTACTCAAAAGAAGTTTAAGCCATGGGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGTTTAATTCAACGGAGGTACTCAAAAGAAGTTTAAGCCATGGGG  593

seq1  TGAAAGAGGCATTTAACTCCCTGAAATAAATCCTGGCGCTGCAGTTTTGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAGGCATTTAACTCCCTGAAATAAATCCTGGCGCTGCAGTTTTGA  643

seq1  CTCCCATTTGCTTACTTTCCTCTCCTCGTTCTCCCTTTGCGTCTTATTAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCATTTGCTTACTTTCCTCTCCTCGTTCTCCCTTTGCGTCTTATTAT  693

seq1  TTATTTATTTTTAAATTTATTTATGCATCTTGTTTAATTATATTAATGAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTTTAAATTTATTTATGCATCTTGTTTAATTATATTAATGAA  743

seq1  TGCTCTTGCCTGCATGTACACCTGTACACCAGAAGAGGGCATCAGATCCC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTGCCTGCATGTACACCTGTACACCAGAAGAGGGCATCAGATCCC  793

seq1  TTTAGAGATGGTCTGGGAATTAAACTCAGAACCTCTTGAAGCTCTTAACT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGATGGTCTGGGAATTAAACTCAGAACCTCTTGAAGCTCTTAACT  843

seq1  GCCAAGCTATCTCACCAGCTCTCATTTAGTGTGTGTGTGTGTGTGTGTGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGCTATCTCACCAGCTCTCATTTAGTGTGTGTGTGTGTGTGTGTGT  893

seq1  GTGTGTGTGTGTGTGTGTGCCTGGAATTTGCCAAGCGGGTTAGGCTGCCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGCCTGGAATTTGCCAAGCGGGTTAGGCTGCCT  943

seq1  GGCTGGCCAGCAAGCCCTAGGGACCCACTTGTCTCTGCCTTCCGAACACC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCCAGCAAGCCCTAGGGACCCACTTGTCTCTGCCTTCCGAACACC  993

seq1  AGGATTACAAGCTGACGCCATTCCTCCTGGTGACTTTTCCACAGGTTCTG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTACAAGCTGACGCCATTCCTCCTGGTGACTTTTCCACAGGTTCTG  1043

seq1  GGCACTGAATTC  1059
      ||||||||||||
seq2  GGCACTGAATTC  1055